FFCP PHASE1:Hg19::chr11:63531453..63531495,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:63531453..63531495,-|id=chr11:63531453..63531495,-|ontology_enrichment_celltype=CL:0002322!6.69e-08!5;CL:0000047!1.20e-07!8|ontology_enrichment_celltype_v019=CL:0002322;1.31e-24;5!CL:0000540;9.20e-13;6!CL:0000404;9.20e-13;6!CL:0002321;2.31e-11;15!CL:0002319;1.19e-07;25!CL:0002605;3.31e-07;3!CL:0000632;3.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0002322,4.18e-25,5;CL:0000047,1.74e-14,8;CL:0000540,9.26e-13,6;CL:0000031,9.26e-13,6;CL:0000404,9.26e-13,6;CL:0002319,1.34e-07,25;CL:0000632,2.34e-07,3;CL:0000133,2.50e-07,59;CL:0002605,4.01e-07,3|ontology_enrichment_development_v019=CL:0000031;9.20e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.01e-21!82;UBERON:0005743!2.56e-20!86;UBERON:0001049!7.68e-20!57;UBERON:0005068!7.68e-20!57;UBERON:0006241!7.68e-20!57;UBERON:0007135!7.68e-20!57;UBERON:0000073!7.20e-19!94;UBERON:0001016!7.20e-19!94;UBERON:0002616!1.54e-17!59;UBERON:0007023!7.98e-16!115;UBERON:0003080!9.24e-16!42;UBERON:0002020!1.33e-15!34;UBERON:0003528!1.33e-15!34;UBERON:0000955!4.69e-15!69;UBERON:0006238!4.69e-15!69;UBERON:0001869!4.88e-15!32;UBERON:0002780!6.26e-15!41;UBERON:0001890!6.26e-15!41;UBERON:0006240!6.26e-15!41;UBERON:0003075!7.18e-15!86;UBERON:0007284!7.18e-15!86;UBERON:0002346!1.36e-14!90;UBERON:0001893!1.00e-13!34;UBERON:0002791!3.64e-13!33;UBERON:0003056!1.56e-12!61;UBERON:0000956!1.62e-12!25;UBERON:0000203!1.62e-12!25;UBERON:0000922!8.12e-10!612;UBERON:0002619!9.48e-10!22;UBERON:0001950!1.11e-09!20;UBERON:0000924!3.31e-09!173;UBERON:0006601!3.31e-09!173;UBERON:0004121!3.37e-09!169;UBERON:0000153!4.97e-09!129;UBERON:0007811!4.97e-09!129;UBERON:0000033!5.08e-09!123;UBERON:0000025!5.66e-09!194;UBERON:0000481!7.09e-09!347;UBERON:0000483!7.31e-08!309;UBERON:0000468!7.47e-08!659;UBERON:0003135!1.02e-07!11;UBERON:0000119!1.40e-07!312;UBERON:0004111!3.76e-07!241;UBERON:0002050!4.79e-07!605;UBERON:0005423!4.79e-07!605;UBERON:0000475!9.31e-07!365;UBERON:0000923!9.61e-07!604;UBERON:0005291!9.61e-07!604;UBERON:0006598!9.61e-07!604;UBERON:0002532!9.61e-07!604|ontology_enrichment_uberon_v019=UBERON:0000922;1.18e-10;49!UBERON:0003528;5.30e-09;34!UBERON:0002020;5.30e-09;34!UBERON:0002791;3.54e-08;32!UBERON:0001869;9.53e-08;32!UBERON:0005383;1.07e-07;3!UBERON:0005382;1.07e-07;3!UBERON:0001893;9.81e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.55e-10,89;UBERON:0001017,1.09e-09,81;UBERON:0003528,1.29e-09,34;UBERON:0002020,1.29e-09,34;UBERON:0002791,3.22e-08,32;UBERON:0001869,3.22e-08,32;UBERON:0001893,1.12e-07,34;UBERON:0005383,1.18e-07,3;UBERON:0005382,1.18e-07,3;UBERON:0011216,6.92e-07,223|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,1.43117993565528,0.684372125364421,1.25542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.661743720148475,0.665188192387692,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04934265323988,2.78312513475119,2.20768491452085,1.96956004529204,1.7662459561294,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,3.80265104465493,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,1.62786481617433,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.895499018888713,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.096670718292122,0.924291702687866,0.460511024178389,0.137836572484531,0.214840489736547,1.16013355131383,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.682499557039929,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0.844016498463076,0,0,0,0.59774396475320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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:63531453..63531495,- | |||
|id=chr11:63531453..63531495,- | |||
|ontology_enrichment_celltype=CL:0002322!6.69e-08!5;CL:0000047!1.20e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.31e-24;5!CL:0000540;9.20e-13;6!CL:0000404;9.20e-13;6!CL:0002321;2.31e-11;15!CL:0002319;1.19e-07;25!CL:0002605;3.31e-07;3!CL:0000632;3.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.18e-25,5;CL:0000047,1.74e-14,8;CL:0000540,9.26e-13,6;CL:0000031,9.26e-13,6;CL:0000404,9.26e-13,6;CL:0002319,1.34e-07,25;CL:0000632,2.34e-07,3;CL:0000133,2.50e-07,59;CL:0002605,4.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;9.20e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.01e-21!82;UBERON:0005743!2.56e-20!86;UBERON:0001049!7.68e-20!57;UBERON:0005068!7.68e-20!57;UBERON:0006241!7.68e-20!57;UBERON:0007135!7.68e-20!57;UBERON:0000073!7.20e-19!94;UBERON:0001016!7.20e-19!94;UBERON:0002616!1.54e-17!59;UBERON:0007023!7.98e-16!115;UBERON:0003080!9.24e-16!42;UBERON:0002020!1.33e-15!34;UBERON:0003528!1.33e-15!34;UBERON:0000955!4.69e-15!69;UBERON:0006238!4.69e-15!69;UBERON:0001869!4.88e-15!32;UBERON:0002780!6.26e-15!41;UBERON:0001890!6.26e-15!41;UBERON:0006240!6.26e-15!41;UBERON:0003075!7.18e-15!86;UBERON:0007284!7.18e-15!86;UBERON:0002346!1.36e-14!90;UBERON:0001893!1.00e-13!34;UBERON:0002791!3.64e-13!33;UBERON:0003056!1.56e-12!61;UBERON:0000956!1.62e-12!25;UBERON:0000203!1.62e-12!25;UBERON:0000922!8.12e-10!612;UBERON:0002619!9.48e-10!22;UBERON:0001950!1.11e-09!20;UBERON:0000924!3.31e-09!173;UBERON:0006601!3.31e-09!173;UBERON:0004121!3.37e-09!169;UBERON:0000153!4.97e-09!129;UBERON:0007811!4.97e-09!129;UBERON:0000033!5.08e-09!123;UBERON:0000025!5.66e-09!194;UBERON:0000481!7.09e-09!347;UBERON:0000483!7.31e-08!309;UBERON:0000468!7.47e-08!659;UBERON:0003135!1.02e-07!11;UBERON:0000119!1.40e-07!312;UBERON:0004111!3.76e-07!241;UBERON:0002050!4.79e-07!605;UBERON:0005423!4.79e-07!605;UBERON:0000475!9.31e-07!365;UBERON:0000923!9.61e-07!604;UBERON:0005291!9.61e-07!604;UBERON:0006598!9.61e-07!604;UBERON:0002532!9.61e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.18e-10;49!UBERON:0003528;5.30e-09;34!UBERON:0002020;5.30e-09;34!UBERON:0002791;3.54e-08;32!UBERON:0001869;9.53e-08;32!UBERON:0005383;1.07e-07;3!UBERON:0005382;1.07e-07;3!UBERON:0001893;9.81e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.55e-10,89;UBERON:0001017,1.09e-09,81;UBERON:0003528,1.29e-09,34;UBERON:0002020,1.29e-09,34;UBERON:0002791,3.22e-08,32;UBERON:0001869,3.22e-08,32;UBERON:0001893,1.12e-07,34;UBERON:0005383,1.18e-07,3;UBERON:0005382,1.18e-07,3;UBERON:0011216,6.92e-07,223 | |||
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|short_description=p@chr11:63531453..63531495,- | |||
}} |
Revision as of 18:40, 10 September 2013
Short description: | p@chr11:63531453..63531495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:63531453..63531495, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.18e-25 | 5 |
neuronal stem cell | 1.74e-14 | 8 |
neuron | 9.26e-13 | 6 |
neuroblast | 9.26e-13 | 6 |
electrically signaling cell | 9.26e-13 | 6 |
neural cell | 1.34e-07 | 25 |
hepatic stellate cell | 2.34e-07 | 3 |
neurectodermal cell | 2.50e-07 | 59 |
astrocyte of the cerebral cortex | 4.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.55e-10 | 89 |
central nervous system | 1.09e-09 | 81 |
brain grey matter | 1.29e-09 | 34 |
gray matter | 1.29e-09 | 34 |
regional part of telencephalon | 3.22e-08 | 32 |
cerebral hemisphere | 3.22e-08 | 32 |
telencephalon | 1.12e-07 | 34 |
caudate-putamen | 1.18e-07 | 3 |
dorsal striatum | 1.18e-07 | 3 |
organ system subdivision | 6.92e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.