FFCP PHASE1:Hg19::chr11:86383072..86383082,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10873|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6985|TSSclassifier=S|UniProt=|association_with_transcript=-65bp_to_ENST00000530520_5end|description=CAGE_peak_16_at_ME3_5end|id=chr11:86383072..86383082,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;3.99e-50;1!CL:0002553;3.99e-50;1!CL:0000557;3.99e-50;1!CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9|ontology_enrichment_celltype_v019_2=CL:0002553,3.99e-50,1;CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9|ontology_enrichment_development_v019=UBERON:0010122;7.14e-26;2!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6|ontology_enrichment_disease=DOID:305!8.79e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0005743!5.01e-15!86;UBERON:0001017!6.83e-14!82;UBERON:0001049!2.82e-11!57;UBERON:0005068!2.82e-11!57;UBERON:0006241!2.82e-11!57;UBERON:0007135!2.82e-11!57;UBERON:0007023!3.95e-11!115;UBERON:0002616!1.15e-10!59;UBERON:0003075!6.64e-10!86;UBERON:0007284!6.64e-10!86;UBERON:0000119!7.72e-10!312;UBERON:0000955!9.29e-10!69;UBERON:0006238!9.29e-10!69;UBERON:0000483!1.24e-09!309;UBERON:0004121!2.34e-09!169;UBERON:0002346!4.06e-09!90;UBERON:0000924!7.05e-09!173;UBERON:0006601!7.05e-09!173;UBERON:0002780!1.82e-08!41;UBERON:0001890!1.82e-08!41;UBERON:0006240!1.82e-08!41;UBERON:0003080!3.66e-08!42;UBERON:0002020!3.95e-08!34;UBERON:0003528!3.95e-08!34;UBERON:0000369!9.28e-08!4;UBERON:0002435!9.28e-08!4;UBERON:0000204!9.28e-08!4;UBERON:0010082!9.28e-08!4;UBERON:0000025!1.97e-07!194;UBERON:0000481!2.07e-07!347;UBERON:0003056!2.23e-07!61|ontology_enrichment_uberon_v019=UBERON:0001873;7.14e-26;2!UBERON:0005383;9.45e-18;3!UBERON:0005382;9.45e-18;3!UBERON:0000369;1.13e-13;4!UBERON:0002435;1.13e-13;4!UBERON:0000204;1.13e-13;4!UBERON:0009663;2.18e-08;7!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.56e-26,2;UBERON:0010122,5.56e-26,2;UBERON:0005383,8.00e-18,3;UBERON:0005382,8.00e-18,3;UBERON:0000369,1.00e-13,4;UBERON:0002435,1.00e-13,4;UBERON:0000204,1.00e-13,4;UBERON:0010082,1.00e-13,4;UBERON:0009663,2.03e-08,7;UBERON:0002420,7.91e-07,9;UBERON:0000125,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0002308,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.164230914106418,0,0,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0.400794101257669,0.213452994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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6985 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENST00000530520_5end | |||
|description=CAGE_peak_16_at_ME3_5end | |||
|id=chr11:86383072..86383082,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;3.99e-50;1!CL:0002553;3.99e-50;1!CL:0000557;3.99e-50;1!CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.99e-50,1;CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.14e-26;2!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease=DOID:305!8.79e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0005743!5.01e-15!86;UBERON:0001017!6.83e-14!82;UBERON:0001049!2.82e-11!57;UBERON:0005068!2.82e-11!57;UBERON:0006241!2.82e-11!57;UBERON:0007135!2.82e-11!57;UBERON:0007023!3.95e-11!115;UBERON:0002616!1.15e-10!59;UBERON:0003075!6.64e-10!86;UBERON:0007284!6.64e-10!86;UBERON:0000119!7.72e-10!312;UBERON:0000955!9.29e-10!69;UBERON:0006238!9.29e-10!69;UBERON:0000483!1.24e-09!309;UBERON:0004121!2.34e-09!169;UBERON:0002346!4.06e-09!90;UBERON:0000924!7.05e-09!173;UBERON:0006601!7.05e-09!173;UBERON:0002780!1.82e-08!41;UBERON:0001890!1.82e-08!41;UBERON:0006240!1.82e-08!41;UBERON:0003080!3.66e-08!42;UBERON:0002020!3.95e-08!34;UBERON:0003528!3.95e-08!34;UBERON:0000369!9.28e-08!4;UBERON:0002435!9.28e-08!4;UBERON:0000204!9.28e-08!4;UBERON:0010082!9.28e-08!4;UBERON:0000025!1.97e-07!194;UBERON:0000481!2.07e-07!347;UBERON:0003056!2.23e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;7.14e-26;2!UBERON:0005383;9.45e-18;3!UBERON:0005382;9.45e-18;3!UBERON:0000369;1.13e-13;4!UBERON:0002435;1.13e-13;4!UBERON:0000204;1.13e-13;4!UBERON:0009663;2.18e-08;7!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.56e-26,2;UBERON:0010122,5.56e-26,2;UBERON:0005383,8.00e-18,3;UBERON:0005382,8.00e-18,3;UBERON:0000369,1.00e-13,4;UBERON:0002435,1.00e-13,4;UBERON:0000204,1.00e-13,4;UBERON:0010082,1.00e-13,4;UBERON:0009663,2.03e-08,7;UBERON:0002420,7.91e-07,9;UBERON:0000125,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0002308,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9 | |||
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|short_description=p16@ME3 | |||
}} |
Revision as of 20:03, 10 September 2013
Short description: | p16@ME3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ME3_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000530520_5end |
EntrezGene: | ME3 |
HGNC: | 6985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.99e-50 | 1 |
Merkel cell | 4.32e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 5.56e-26 | 2 |
future caudate nucleus | 5.56e-26 | 2 |
caudate-putamen | 8.00e-18 | 3 |
dorsal striatum | 8.00e-18 | 3 |
corpus striatum | 1.00e-13 | 4 |
striatum | 1.00e-13 | 4 |
ventral part of telencephalon | 1.00e-13 | 4 |
future corpus striatum | 1.00e-13 | 4 |
telencephalic nucleus | 2.03e-08 | 7 |
basal ganglion | 7.91e-07 | 9 |
neural nucleus | 7.91e-07 | 9 |
nuclear complex of neuraxis | 7.91e-07 | 9 |
nucleus of brain | 7.91e-07 | 9 |
aggregate regional part of brain | 7.91e-07 | 9 |
collection of basal ganglia | 7.91e-07 | 9 |
cerebral subcortex | 7.91e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.