FFCP PHASE1:Hg19::chr12:112443830..112443870,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25084|TSSclassifier=W|UniProt=F8VNZ8|association_with_transcript=0bp_to_ENST00000550037_5end|description=CAGE_peak_2_at_TMEM116_5end|id=chr12:112443830..112443870,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006595;1.54e-07;86|ontology_enrichment_disease=DOID:305!4.71e-17!106;DOID:162!1.05e-13!235;DOID:14566!7.65e-13!239;DOID:0050687!1.29e-11!143|ontology_enrichment_disease_v019=DOID:1036;1.08e-07;8|ontology_enrichment_disease_v019_2=DOID:1036,1.32e-07,8|ontology_enrichment_uberon=UBERON:0007023!2.50e-13!115;UBERON:0001007!1.61e-12!155;UBERON:0001555!1.61e-12!155;UBERON:0007026!1.61e-12!155;UBERON:0004921!2.03e-12!129;UBERON:0004185!2.03e-12!129;UBERON:0004119!2.46e-10!169;UBERON:0000925!2.46e-10!169;UBERON:0006595!2.46e-10!169;UBERON:0000077!7.90e-10!130;UBERON:0008947!3.08e-08!38;UBERON:0003258!3.08e-08!38;UBERON:0001004!4.46e-08!72;UBERON:0001041!4.56e-08!98;UBERON:0000065!4.82e-07!53|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.04e-15,114;UBERON:0001007,2.28e-10,145;UBERON:0001555,2.28e-10,145;UBERON:0007026,2.28e-10,145;UBERON:0004921,4.28e-09,118;UBERON:0004119,1.37e-08,160;UBERON:0000925,1.37e-08,160;UBERON:0006595,1.37e-08,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.73272894144065,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78073625566651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.723033089650446,0.220587945464788,0.653638332277218,0.237270619111097,0.269662616320329,0.784885860501384,0.769494313892781,0,0,0,0,2.53510069643662,0,1.77236972004421,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.308061348417659,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11015485228392,0,2.45792611446766,2.01308497103174,2.66958626739054,0,0.556812347790485,0,0.270455678475983,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,1.59398390600856,0,0,0,0,0,0,2.86433879480975,0.511572370226872,1.479651084554,0,0,0,0.0927680981618513,0,0.520855522170466,1.13697999995054,0,0.910347586283997,0.254253650292766,0.236387681767936,0,0.583209226766509,0,0,0,0,0,0,1.31631238292384,0.762569244632931,1.53366118706464,0.692552326534174,0,0,0,0.651884231532048,0,0,0,1.02193298195737,0,0,8.57263510345287,9.4110016472515,9.06236569669551,9.67744036893344,0,0,0,0.141353071433941,0.649165919226273,0,1.06149077404007,1.83309043480088,0,0,0,2.22423738836234,0,0,0,0.782658475728359,0,7.89168805698781,1.20990716048664,0,0.31593289814244,0.300646838828985,0.829505531177977,0,0,0,0,2.84609546029793,0,0.867798691675654,0,0,0.698906672968121,0,0.483781656445426,0.803982487948041,0.656923656425674,1.84279131327997,0,1.35588444468319,0,0,0,1.17330829640882,0.561111741760736,2.98834192635094,0,1.00863292007874,0.343609788497747,0,0.14405479798815,0.745515213392595,1.17847017308398,0,0,0.917983958726896,0,0,0,0,0,0,0.837847203816763,4.12488763221031,0.717873024576814,3.79390100948083,11.5891032996874,7.81100101046554,6.6511637761859,0,1.16495949527454,0.0787831823072236,0,0,2.06697711180972,0.169346664131569,0,0.408610218334727,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,11.6070293183692,0.182248669974074,1.34173875039706,22.6960437021691,12.2743736235896,0,0.896436696664224,0,0.714695326373367,5.95882773328889,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,1.71086837884329,0.704815022316672,6.51403216662938,5.18774206828898,7.04206394090232,0,0.197611631897944,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25084 | |||
|TSSclassifier=W | |||
|UniProt=F8VNZ8 | |||
|association_with_transcript=0bp_to_ENST00000550037_5end | |||
|description=CAGE_peak_2_at_TMEM116_5end | |||
|id=chr12:112443830..112443870,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.54e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.71e-17!106;DOID:162!1.05e-13!235;DOID:14566!7.65e-13!239;DOID:0050687!1.29e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.08e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.32e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-13!115;UBERON:0001007!1.61e-12!155;UBERON:0001555!1.61e-12!155;UBERON:0007026!1.61e-12!155;UBERON:0004921!2.03e-12!129;UBERON:0004185!2.03e-12!129;UBERON:0004119!2.46e-10!169;UBERON:0000925!2.46e-10!169;UBERON:0006595!2.46e-10!169;UBERON:0000077!7.90e-10!130;UBERON:0008947!3.08e-08!38;UBERON:0003258!3.08e-08!38;UBERON:0001004!4.46e-08!72;UBERON:0001041!4.56e-08!98;UBERON:0000065!4.82e-07!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.04e-15,114;UBERON:0001007,2.28e-10,145;UBERON:0001555,2.28e-10,145;UBERON:0007026,2.28e-10,145;UBERON:0004921,4.28e-09,118;UBERON:0004119,1.37e-08,160;UBERON:0000925,1.37e-08,160;UBERON:0006595,1.37e-08,160 | |||
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| |||
|short_description=p2@TMEM116 | |||
}} |
Revision as of 20:55, 10 September 2013
Short description: | p2@TMEM116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMEM116_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550037_5end |
EntrezGene: | TMEM116 |
HGNC: | 25084 |
UniProt: | F8VNZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.04e-15 | 114 |
digestive system | 2.28e-10 | 145 |
digestive tract | 2.28e-10 | 145 |
primitive gut | 2.28e-10 | 145 |
subdivision of digestive tract | 4.28e-09 | 118 |
endoderm-derived structure | 1.37e-08 | 160 |
endoderm | 1.37e-08 | 160 |
presumptive endoderm | 1.37e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.32e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.