FFCP PHASE1:Hg19::chr12:12714025..12714064,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80824|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17909|TSSclassifier=S|UniProt=F5H5X4|association_with_transcript=0bp_to_ENST00000539940_5end|coexpression_cluster_id=C103|description=CAGE_peak_4_at_DUSP16_5end|id=chr12:12714025..12714064,-|ontology_enrichment_celltype=CL:0000738!6.11e-11!140;CL:0000791!1.17e-09!18;CL:0000789!1.17e-09!18;CL:0002420!1.17e-09!18;CL:0002419!1.17e-09!18;CL:0000790!1.17e-09!18;CL:0002087!3.93e-08!119;CL:0002031!6.29e-08!124;CL:0000084!5.84e-07!25;CL:0000827!5.84e-07!25;CL:0000860!8.09e-07!45|ontology_enrichment_celltype_v019=CL:0000791;5.29e-17;18!CL:0000789;5.29e-17;18!CL:0002419;5.29e-17;18!CL:0000084;7.45e-11;25!CL:0000624;2.86e-10;6!CL:0000625;4.60e-10;11!CL:0000860;5.54e-08;33!CL:0002057;5.54e-08;33|ontology_enrichment_celltype_v019_2=CL:0000791,3.72e-17,18;CL:0000789,3.72e-17,18;CL:0002420,3.72e-17,18;CL:0002419,3.72e-17,18;CL:0000790,3.72e-17,18;CL:0000738,2.69e-16,136;CL:0002087,1.02e-12,115;CL:0000084,5.89e-11,25;CL:0000827,5.89e-11,25;CL:0002031,7.65e-11,120;CL:0000624,2.83e-10,6;CL:0000037,3.24e-10,168;CL:0000625,3.31e-10,11;CL:0000838,3.57e-10,52;CL:0000542,7.60e-10,53;CL:0000051,7.60e-10,53;CL:0002032,1.86e-09,161;CL:0000837,1.86e-09,161;CL:0000988,5.79e-09,177;CL:0000860,9.93e-07,42;CL:0002057,9.93e-07,42|ontology_enrichment_development_v019=CL:0000790;5.29e-17;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!8.83e-08!129;UBERON:0004185!8.83e-08!129;UBERON:0001557!1.41e-07!19;UBERON:0001737!2.92e-07!9;UBERON:0001007!3.60e-07!155;UBERON:0001555!3.60e-07!155;UBERON:0007026!3.60e-07!155;UBERON:0004119!3.86e-07!169;UBERON:0000925!3.86e-07!169;UBERON:0006595!3.86e-07!169;UBERON:0002193!5.46e-07!112|ontology_enrichment_uberon_v019=UBERON:0001737;8.76e-12;9!UBERON:0001557;8.76e-12;9!UBERON:0002365;3.78e-07;31!UBERON:0002330;3.78e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.05e-12,9;UBERON:0001557,1.07e-11,19;UBERON:0001041,7.84e-08,87;UBERON:0004921,2.15e-07,118;UBERON:0002365,3.92e-07,31;UBERON:0002330,3.92e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,5.8074188368443,5.99334302984604,7.32010266217217,3.14691421479123,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0.995184627411951,0,4.43196326825502,0.601633342410425,0.434021741431704,0,0.32389366601898,0.77272670290256,0.581592955118259,0,0.242584061187816,1.62700325833979,1.23350366406548,1.54853185447552,0.575384784644301,0.512321413058201,0.709446689665756,3.7922024881028,1.93645405075148,1.35426486594342,1.12945403725563,3.82068610080984,2.47195832889593,6.73384563215986,8.02322567690234,6.39337125799041,0,0.199463657621632,0,11.0279510678862,14.1846306172785,9.34233373493363,0.251248665256743,0.521482918420201,0,2.42159801053347,11.4166067156145,6.32924774881769,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,11.4091666666023,12.5763444079733,14.3921049299656,26.4154662717271,14.6665019985116,10.8892995318989,9.74133642039557,47.4608546330839,53.6182751604204,53.3896685946527,45.7658529762876,30.1014601355337,20.9395549571404,5.59088875652499,7.46145048021791,8.40428948631652,1.77943875794473,1.87278579662799,3.1360657141493,9.17805675850286,16.4784812248826,15.806862492201,12.9040042929946,2.22995790026868,1.95325036156926,0,3.46322773878877,3.32765189001488,2.49861453104692,6.15620855314444,1.64225599384209,4.23374160771938,2.67440195783507,2.89648807765598,0,1.34140171940727,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.785874452986276,0,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,3.9534125230819,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0.808264032418128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,3.81844568827169,1.14721838155602,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,4.14073800139454,5.05754070234305,7.23033089650446,2.86764329104224,3.05031221729369,4.74541238222193,4.44943316928543,2.94332197688019,5.38646019724947,0,0,0.4115740113314,0,11.4079531339648,5.89696330006576,8.27105869353966,0,0.860919069801795,0,1.42675371031213,0,0.100528972411631,0.277765335475589,0,0,0,0,0,1.44366447761074,1.38895653772983,0.761016608938393,0,0.858486162094873,0,0,0.148631162288728,0,1.51183915378974,1.98485136139341,0.0895585227028483,0,0,1.97065295158377,0,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,3.34952292343276,2.80315847317372,3.08023287071396,0,0,0,0,0.637938751653163,2.24702107184155,0,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7556646008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17909 | |||
|TSSclassifier=S | |||
|UniProt=F5H5X4 | |||
|association_with_transcript=0bp_to_ENST00000539940_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_4_at_DUSP16_5end | |||
|id=chr12:12714025..12714064,- | |||
|ontology_enrichment_celltype=CL:0000738!6.11e-11!140;CL:0000791!1.17e-09!18;CL:0000789!1.17e-09!18;CL:0002420!1.17e-09!18;CL:0002419!1.17e-09!18;CL:0000790!1.17e-09!18;CL:0002087!3.93e-08!119;CL:0002031!6.29e-08!124;CL:0000084!5.84e-07!25;CL:0000827!5.84e-07!25;CL:0000860!8.09e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.29e-17;18!CL:0000789;5.29e-17;18!CL:0002419;5.29e-17;18!CL:0000084;7.45e-11;25!CL:0000624;2.86e-10;6!CL:0000625;4.60e-10;11!CL:0000860;5.54e-08;33!CL:0002057;5.54e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.72e-17,18;CL:0000789,3.72e-17,18;CL:0002420,3.72e-17,18;CL:0002419,3.72e-17,18;CL:0000790,3.72e-17,18;CL:0000738,2.69e-16,136;CL:0002087,1.02e-12,115;CL:0000084,5.89e-11,25;CL:0000827,5.89e-11,25;CL:0002031,7.65e-11,120;CL:0000624,2.83e-10,6;CL:0000037,3.24e-10,168;CL:0000625,3.31e-10,11;CL:0000838,3.57e-10,52;CL:0000542,7.60e-10,53;CL:0000051,7.60e-10,53;CL:0002032,1.86e-09,161;CL:0000837,1.86e-09,161;CL:0000988,5.79e-09,177;CL:0000860,9.93e-07,42;CL:0002057,9.93e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;5.29e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.83e-08!129;UBERON:0004185!8.83e-08!129;UBERON:0001557!1.41e-07!19;UBERON:0001737!2.92e-07!9;UBERON:0001007!3.60e-07!155;UBERON:0001555!3.60e-07!155;UBERON:0007026!3.60e-07!155;UBERON:0004119!3.86e-07!169;UBERON:0000925!3.86e-07!169;UBERON:0006595!3.86e-07!169;UBERON:0002193!5.46e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.76e-12;9!UBERON:0001557;8.76e-12;9!UBERON:0002365;3.78e-07;31!UBERON:0002330;3.78e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.05e-12,9;UBERON:0001557,1.07e-11,19;UBERON:0001041,7.84e-08,87;UBERON:0004921,2.15e-07,118;UBERON:0002365,3.92e-07,31;UBERON:0002330,3.92e-07,31 | |||
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| |||
|short_description=p4@DUSP16 | |||
}} |
Revision as of 21:39, 10 September 2013
Short description: | p4@DUSP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DUSP16_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 0bp_to_ENST00000539940_5end |
EntrezGene: | DUSP16 |
HGNC: | 17909 |
UniProt: | F5H5X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.72e-17 | 18 |
alpha-beta T cell | 3.72e-17 | 18 |
immature T cell | 3.72e-17 | 18 |
mature T cell | 3.72e-17 | 18 |
immature alpha-beta T cell | 3.72e-17 | 18 |
leukocyte | 2.69e-16 | 136 |
nongranular leukocyte | 1.02e-12 | 115 |
T cell | 5.89e-11 | 25 |
pro-T cell | 5.89e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 7.65e-11 | 120 |
CD4-positive, alpha-beta T cell | 2.83e-10 | 6 |
hematopoietic stem cell | 3.24e-10 | 168 |
CD8-positive, alpha-beta T cell | 3.31e-10 | 11 |
lymphoid lineage restricted progenitor cell | 3.57e-10 | 52 |
lymphocyte | 7.60e-10 | 53 |
common lymphoid progenitor | 7.60e-10 | 53 |
hematopoietic oligopotent progenitor cell | 1.86e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-09 | 161 |
hematopoietic cell | 5.79e-09 | 177 |
classical monocyte | 9.93e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.05e-12 | 9 |
upper respiratory tract | 1.07e-11 | 19 |
foregut | 7.84e-08 | 87 |
subdivision of digestive tract | 2.15e-07 | 118 |
exocrine gland | 3.92e-07 | 31 |
exocrine system | 3.92e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.