FFCP PHASE1:Hg19::chr12:27485733..27485742,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18984|TSSclassifier=S|UniProt=Q8WYA1,F5H402|association_with_transcript=-44bp_to_ENST00000544915,NM_001248002,NM_001248003,NM_001248004,NM_001248005,NM_020183_5end|description=CAGE_peak_5_at_ARNTL2_5end|id=chr12:27485733..27485742,+|ontology_enrichment_celltype=CL:0000066!1.61e-09!254;CL:0000548!4.57e-09!679;CL:0000004!4.57e-09!679;CL:0000255!4.57e-09!679;CL:0000012!5.08e-09!682;CL:0000680!2.08e-07!57;CL:0000056!2.08e-07!57;CL:0000355!2.08e-07!57;CL:0000223!2.25e-07!59;CL:0002076!3.76e-07!43;CL:0002321!8.12e-07!248|ontology_enrichment_celltype_v019=CL:0000307;3.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000068,3.74e-08,3;CL:0000069,3.74e-08,3;CL:0000307,3.74e-08,3;CL:0000377,3.74e-08,3|ontology_enrichment_development_v019=CL:0000377;3.26e-08;3|ontology_enrichment_disease=DOID:162!1.11e-09!235;DOID:305!1.25e-09!106;DOID:14566!1.93e-09!239;DOID:0050687!3.28e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0001007!2.51e-07!155;UBERON:0001555!2.51e-07!155;UBERON:0007026!2.51e-07!155;UBERON:0003104!3.60e-07!238;UBERON:0009142!3.60e-07!238;UBERON:0000490!4.26e-07!138;UBERON:0000486!5.38e-07!82;UBERON:0000914!7.76e-07!83;UBERON:0002329!7.76e-07!83;UBERON:0003077!7.76e-07!83;UBERON:0003059!7.76e-07!83;UBERON:0007282!7.76e-07!83;UBERON:0009618!7.76e-07!83;UBERON:0007285!7.76e-07!83|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.382067028739756,0.410502947249729,0.550975469195755,0,0,0,0,1.204823675113,1.47901604066715,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.25618263945135,0,0.493313713811028,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,1.0843174571537,0,2.02785126545153,0,1.45990461090791,0.283604451492204,0.443458794925128,0.175669571386252,0,0.364295288292542,1.11235332835329,0,0.348259474598534,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,1.10298924103761,0,0.446498641420399,0.22452937262617,0.900891843866578,0,0,0.183201743930407,0,0,0,0,1.01304409331664,0.264818361626438,1.14734648299525,1.06400514659507,0,0,0,0.311211035399766,0.269421344139376,0.653847612453835,0,0,0,0,0,0.448346041655403,1.87895197830024,1.29498355494505,0.421352420106746,0.61246251376468,1.10550885580591,0.516628905878827,1.18800285728205,0.494533858557114,0,0,0.673344455816265,1.12606667884768,0.554128230968366,1.75591048352335,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0.211931901159562,0.900273288253207,0.412210116953756,0,0.37223371266318,0,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0.503760491138201,0.169560592310488,0.57978255948989,1.90922284413584,0.573609190778008,0.487894824518382,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.245976877086227,0,0.219500570817251,0,1.00528972411631,1.01847289674383,0,0,0,0.231860809950154,0.352226082707465,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0.567100388969546,0.806026704325635,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,1.64648067356154,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,4.27910715122155,0.434343920002738,0.61642896765115,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0.737476674166813,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23367755042124,0.532685175939381,0.492762936082855,0.519254429183621,0.697262270759755,0.362578348774867,0.40101294060657,2.3941057123333,0.68888668898764,0.182091168006717,0.262248829918848,0.451199612907412,0.462092022626489,0,0,0.73886140225013,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0.6716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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18984 | |||
|TSSclassifier=S | |||
|UniProt=Q8WYA1,F5H402 | |||
|association_with_transcript=-44bp_to_ENST00000544915,NM_001248002,NM_001248003,NM_001248004,NM_001248005,NM_020183_5end | |||
|description=CAGE_peak_5_at_ARNTL2_5end | |||
|id=chr12:27485733..27485742,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-09!254;CL:0000548!4.57e-09!679;CL:0000004!4.57e-09!679;CL:0000255!4.57e-09!679;CL:0000012!5.08e-09!682;CL:0000680!2.08e-07!57;CL:0000056!2.08e-07!57;CL:0000355!2.08e-07!57;CL:0000223!2.25e-07!59;CL:0002076!3.76e-07!43;CL:0002321!8.12e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000307;3.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.74e-08,3;CL:0000069,3.74e-08,3;CL:0000307,3.74e-08,3;CL:0000377,3.74e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.26e-08;3 | |||
|ontology_enrichment_disease=DOID:162!1.11e-09!235;DOID:305!1.25e-09!106;DOID:14566!1.93e-09!239;DOID:0050687!3.28e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0001007!2.51e-07!155;UBERON:0001555!2.51e-07!155;UBERON:0007026!2.51e-07!155;UBERON:0003104!3.60e-07!238;UBERON:0009142!3.60e-07!238;UBERON:0000490!4.26e-07!138;UBERON:0000486!5.38e-07!82;UBERON:0000914!7.76e-07!83;UBERON:0002329!7.76e-07!83;UBERON:0003077!7.76e-07!83;UBERON:0003059!7.76e-07!83;UBERON:0007282!7.76e-07!83;UBERON:0009618!7.76e-07!83;UBERON:0007285!7.76e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@ARNTL2 | |||
}} |
Revision as of 22:19, 10 September 2013
Short description: | p5@ARNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ARNTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000544915, NM_001248002, NM_001248003, NM_001248004, NM_001248005, NM_020183_5end |
EntrezGene: | ARNTL2 |
HGNC: | 18984 |
UniProt: | Q8WYA1F5H402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.74e-08 | 3 |
branched duct epithelial cell | 3.74e-08 | 3 |
tracheal epithelial cell | 3.74e-08 | 3 |
tracheoblast | 3.74e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.