FFCP PHASE1:Hg19::chr12:27485762..27485776,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18984|TSSclassifier=S|UniProt=Q8WYA1,F5H402|association_with_transcript=-10bp_to_ENST00000544915,NM_001248002,NM_001248003,NM_001248004,NM_001248005,NM_020183_5end|coexpression_cluster_id=C3273|description=CAGE_peak_3_at_ARNTL2_5end|id=chr12:27485762..27485776,+|ontology_enrichment_celltype=CL:0000066!6.31e-12!254;CL:0000220!8.61e-11!246;CL:0002321!1.22e-10!248;CL:0002076!5.24e-10!43;CL:0000223!7.17e-09!59;CL:0000548!4.18e-08!679;CL:0000004!4.18e-08!679;CL:0000255!4.18e-08!679;CL:0000012!1.00e-07!682;CL:0000359!2.54e-07!32|ontology_enrichment_celltype_v019=CL:0002076;1.01e-08;42!CL:0000359;6.35e-07;32|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-12,253;CL:0002076,2.52e-11,42;CL:0002321,7.67e-11,250;CL:0000223,4.59e-10,58;CL:0000359,3.25e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!1.49e-10!69;UBERON:0001981!3.49e-10!60;UBERON:0007500!3.49e-10!60;UBERON:0004537!3.49e-10!60;UBERON:0006965!3.49e-10!60;UBERON:0000490!5.46e-10!138;UBERON:0001637!6.04e-10!42;UBERON:0003509!6.04e-10!42;UBERON:0004572!6.04e-10!42;UBERON:0000480!1.17e-08!626;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0004119!2.01e-08!169;UBERON:0000925!2.01e-08!169;UBERON:0006595!2.01e-08!169;UBERON:0000467!2.15e-08!625;UBERON:0005256!2.22e-08!143;UBERON:0000926!4.06e-08!448;UBERON:0004120!4.06e-08!448;UBERON:0006603!4.06e-08!448;UBERON:0003914!4.30e-08!118;UBERON:0002100!6.30e-08!216;UBERON:0002049!8.50e-08!79;UBERON:0007798!8.50e-08!79;UBERON:0002050!1.68e-07!605;UBERON:0005423!1.68e-07!605;UBERON:0000923!2.05e-07!604;UBERON:0005291!2.05e-07!604;UBERON:0006598!2.05e-07!604;UBERON:0002532!2.05e-07!604;UBERON:0004573!2.17e-07!33;UBERON:0004571!2.17e-07!33;UBERON:0000486!3.37e-07!82;UBERON:0000922!4.66e-07!612;UBERON:0004111!8.67e-07!241|ontology_enrichment_uberon_v019=UBERON:0001637;1.33e-07;42!UBERON:0003509;1.33e-07;42!UBERON:0004572;1.33e-07;42!UBERON:0004573;5.03e-07;33!UBERON:0004571;5.03e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.72e-10,68;UBERON:0001637,3.24e-10,42;UBERON:0003509,3.24e-10,42;UBERON:0004572,3.24e-10,42;UBERON:0000490,4.43e-10,148;UBERON:0007500,5.92e-10,59;UBERON:0001981,5.92e-10,59;UBERON:0004537,5.92e-10,59;UBERON:0006965,5.92e-10,59;UBERON:0003914,2.61e-08,117;UBERON:0004573,1.55e-07,33;UBERON:0004571,1.55e-07,33;UBERON:0002049,2.07e-07,78;UBERON:0007798,2.07e-07,78;UBERON:0002100,9.66e-07,199|phase1_expression=0.726713517082227,1.2846031433459,0.422863212287913,1.0007329835313,0,0,0,0,1.56711376919903,2.21160542851358,4.88460817580699,0,0,1.73272894144065,0,2.6893005858071,4.21886169616784,1.46062018077475,4.39139518911456,1.47745269692145,0.816002764977012,0.940364164434263,4.29353980696585,5.06435372769671,4.6450776650077,6.95361992306356,8.37426012389447,10.3898231334057,0.393364276848904,0,0.464448369948228,27.5826367343678,14.1566781825778,15.1599144168383,0,0,0.587200878669695,4.43196326825502,2.4065333696417,3.90619567288533,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,1.85943229524548,2.05583944010913,0.929119112685311,10.9323109082417,7.17249978281482,10.1687358852092,1.72372840368309,1.93645405075148,1.35426486594342,2.44715041405386,0.272906150057846,2.47195832889593,3.06083892370903,3.53021929783703,3.19668562899521,9.23583640522805,9.97318288108159,10.2293940127847,3.19230162491442,3.40431134814684,5.60540024096017,3.01498398308092,3.65038042894141,3.69221035998698,1.81619850790011,3.31449872388808,6.0127853613768,0,0.212604299965044,0.628975936525128,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0.473447805734733,0,1.78256731016278,0,0.443067789167242,0,0.512365278902701,1.30059347559878,1.64437904603676,1.65810010671509,0.289803085735052,0,0,0,0.793165398882963,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,1.02290049474824,10.4817354191524,3.00802746381534,2.89693037921647,3.1811437882044,5.35298357332899,2.17430079477356,1.10864698731282,1.66886092816939,0.327447688744282,5.10013403609559,4.82019775619758,1.9472843619281,2.61194605948901,1.46253756570752,0,0,0,3.7764857399674,5.16140757063675,1.73570250803797,4.52246353539208,6.71199097935849,3.30141650328081,5.22487416342026,3.35941786920128,3.5576626268671,3.3472061276467,2.41697590265488,4.56163263431108,3.41686880567437,4.41195696415042,2.43042584364528,5.53658315361295,5.61323431565425,7.31974623141594,0,2.84779697870439,2.93122790288652,0,0,6.54141078213801,0.496971951695318,8.86413581652058,0.264818361626438,2.86836620748814,14.1867352879343,1.68203280042692,6.4049397437823,1.2333377420858,0.622422070799533,2.02066008104532,2.28846664358842,0.302714855289863,0,0,1.5608003841516,1.71141546463335,1.19558944441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.604536852243,46.935017938187,13.9619978039153,3.65168194123259,1.37618785021362,0.573358332605805,0.631086248772738,0.747906392100062,4.79985759374415,0.5290268405154,10.0438654905023,2.77305377178851,2.16313281061895,2.14482922219634,0.764859003745869,2.91406552326305,6.52728510348683,1.87052183685892,1.56221329209236,1.50424523575425,0.303114792872958,0,3.31667775783512,0.517164979309476,6.82348742083139,0.714193294391221,0.839655827868079,2.42091385753846,2.80329656451534,0.318235791390825,0.202117188958219,8.92638666377542,5.4757328173645,11.6519051715236,8.10460920937243,0.99798106963804,5.86103533999016,12.0601900841818,19.307228228694,1.07790242527904,7.03922827210363,0.977931553462932,2.44137706989443,0.665756774185513,1.81146414231924,5.77023286145819|short_description=p3@ARNTL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18984 | |||
|TSSclassifier=S | |||
|UniProt=Q8WYA1,F5H402 | |||
|association_with_transcript=-10bp_to_ENST00000544915,NM_001248002,NM_001248003,NM_001248004,NM_001248005,NM_020183_5end | |||
|coexpression_cluster_id=C3273 | |||
|description=CAGE_peak_3_at_ARNTL2_5end | |||
|id=chr12:27485762..27485776,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.31e-12!254;CL:0000220!8.61e-11!246;CL:0002321!1.22e-10!248;CL:0002076!5.24e-10!43;CL:0000223!7.17e-09!59;CL:0000548!4.18e-08!679;CL:0000004!4.18e-08!679;CL:0000255!4.18e-08!679;CL:0000012!1.00e-07!682;CL:0000359!2.54e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.01e-08;42!CL:0000359;6.35e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-12,253;CL:0002076,2.52e-11,42;CL:0002321,7.67e-11,250;CL:0000223,4.59e-10,58;CL:0000359,3.25e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.49e-10!69;UBERON:0001981!3.49e-10!60;UBERON:0007500!3.49e-10!60;UBERON:0004537!3.49e-10!60;UBERON:0006965!3.49e-10!60;UBERON:0000490!5.46e-10!138;UBERON:0001637!6.04e-10!42;UBERON:0003509!6.04e-10!42;UBERON:0004572!6.04e-10!42;UBERON:0000480!1.17e-08!626;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0004119!2.01e-08!169;UBERON:0000925!2.01e-08!169;UBERON:0006595!2.01e-08!169;UBERON:0000467!2.15e-08!625;UBERON:0005256!2.22e-08!143;UBERON:0000926!4.06e-08!448;UBERON:0004120!4.06e-08!448;UBERON:0006603!4.06e-08!448;UBERON:0003914!4.30e-08!118;UBERON:0002100!6.30e-08!216;UBERON:0002049!8.50e-08!79;UBERON:0007798!8.50e-08!79;UBERON:0002050!1.68e-07!605;UBERON:0005423!1.68e-07!605;UBERON:0000923!2.05e-07!604;UBERON:0005291!2.05e-07!604;UBERON:0006598!2.05e-07!604;UBERON:0002532!2.05e-07!604;UBERON:0004573!2.17e-07!33;UBERON:0004571!2.17e-07!33;UBERON:0000486!3.37e-07!82;UBERON:0000922!4.66e-07!612;UBERON:0004111!8.67e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.33e-07;42!UBERON:0003509;1.33e-07;42!UBERON:0004572;1.33e-07;42!UBERON:0004573;5.03e-07;33!UBERON:0004571;5.03e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.72e-10,68;UBERON:0001637,3.24e-10,42;UBERON:0003509,3.24e-10,42;UBERON:0004572,3.24e-10,42;UBERON:0000490,4.43e-10,148;UBERON:0007500,5.92e-10,59;UBERON:0001981,5.92e-10,59;UBERON:0004537,5.92e-10,59;UBERON:0006965,5.92e-10,59;UBERON:0003914,2.61e-08,117;UBERON:0004573,1.55e-07,33;UBERON:0004571,1.55e-07,33;UBERON:0002049,2.07e-07,78;UBERON:0007798,2.07e-07,78;UBERON:0002100,9.66e-07,199 | |||
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| |||
|short_description=p3@ARNTL2 | |||
}} |
Revision as of 22:19, 10 September 2013
Short description: | p3@ARNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARNTL2_5end |
Coexpression cluster: | C3273_osteosarcoma_endometrial_embryonic_astrocytoma_mucinous_Myoblast_prostate |
Association with transcript: | -10bp_to_ENST00000544915, NM_001248002, NM_001248003, NM_001248004, NM_001248005, NM_020183_5end |
EntrezGene: | ARNTL2 |
HGNC: | 18984 |
UniProt: | Q8WYA1F5H402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.