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FFCP PHASE1:Hg19::chr12:27485823..27485868,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=56938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18984|TSSclassifier=S|UniProt=F5H402|association_with_transcript=0bp_to_ENST00000395901,ENST00000546179,uc001rhw.2,uc010sjp.1_5end|coexpression_cluster_id=C3273|description=CAGE_peak_2_at_ARNTL2_5end|id=chr12:27485823..27485868,+|ontology_enrichment_celltype=CL:0000066!3.23e-12!254;CL:0000220!3.31e-12!246;CL:0002321!6.47e-12!248;CL:0000076!2.99e-08!62;CL:0000359!3.87e-08!32;CL:0000222!1.05e-07!119;CL:0002076!1.65e-07!43|ontology_enrichment_celltype_v019=CL:0000359;1.68e-07;32|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-12,253;CL:0002321,4.40e-12,250;CL:0002076,2.01e-08,42;CL:0000359,3.02e-08,32;CL:0000076,1.13e-07,63;CL:0000222,1.39e-07,121;CL:0000223,3.45e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!6.42e-11!69;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0002049!1.81e-09!79;UBERON:0007798!1.81e-09!79;UBERON:0001637!1.62e-08!42;UBERON:0003509!1.62e-08!42;UBERON:0004572!1.62e-08!42;UBERON:0004111!6.76e-08!241;UBERON:0000490!8.72e-08!138;UBERON:0000119!1.50e-07!312;UBERON:0000483!1.87e-07!309;UBERON:0000480!9.31e-07!626|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.06e-10,68;UBERON:0007500,2.42e-09,59;UBERON:0001981,2.42e-09,59;UBERON:0004537,2.42e-09,59;UBERON:0006965,2.42e-09,59;UBERON:0002049,5.33e-09,78;UBERON:0007798,5.33e-09,78;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0000490,3.82e-08,148;UBERON:0004111,1.08e-07,240|phase1_expression=0.726713517082227,1.07050261945492,0.422863212287913,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0.261185628199839,2.21160542851358,2.79120467188971,1.31064823278103,1.31883489114227,1.60896258848061,0.994192127183747,4.70627602516243,10.8485015044316,5.84248072309899,8.78279037822912,1.84681587115182,1.22400414746552,0,1.43117993565528,6.84372125364421,5.90050406095573,7.64134057479513,8.6205618922443,8.02849969399528,0,0,1.23852898652861,15.6301608161418,6.32532429434325,11.8321283253372,0,0,2.34880351467878,1.10799081706375,1.20326668482085,1.51907609501096,0.447830948479849,1.94336199611388,0.515151135268373,1.30858414901608,0.755751887377619,1.4555043671269,1.85943229524548,0.822335776043652,1.85823822537062,5.75384784644301,4.09857130446561,5.20260905754887,1.37898272294647,1.93645405075148,0,2.07066573496865,1.91034305040492,0,1.83650335422542,1.28371610830437,1.27867425159808,9.23583640522805,7.18069167437875,8.95071976118658,2.32167390902867,1.70215567407342,3.11411124497787,4.27122730936464,3.65038042894141,2.38907729175628,1.81619850790011,0.736555271975129,1.89877432464531,0,0.637812899895131,1.04829322754188,0.336985893439485,0.300353785683013,0.32145117339416,0.570025487482497,0.59675003159727,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,3.16060901730092,0,0,0,1.00311897234407,0,0,0,5.23629147360316,0.294605907474837,0.664601683750863,0.541607727530031,4.73937882984998,4.81219585971549,5.91976456573234,7.46145048021791,3.18783394308558,0,0,0,3.17266159553185,0,0,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0.710331756132051,0,0,0.534880391567015,0,0,0.670700859703636,0.895037932904712,9.75885711438329,2.50668955317945,3.62116297402059,5.5670016293577,4.86634870302636,5.76662384700814,5.5432349365641,4.83091321312193,1.63723844372141,5.10013403609559,5.56176664176644,10.7100639906045,11.3184329244524,7.31268782853758,0.238490624305342,0,0,9.73935796096855,6.881876760849,4.85996702250632,4.52246353539208,6.29249154314859,4.40188867104108,5.64286409649389,5.16833518338658,7.82685777910763,9.37217715741077,5.63961043952806,8.36299316290364,5.36936526605973,5.14728312484216,1.62028389576352,8.12627527385126,13.247232984944,12.6124858141321,7.66583187329416,10.4419222552494,7.32806975721629,0,0,6.97750483428055,3.47880366186723,6.58478660655815,1.45650098894541,1.43418310374407,11.7040566125458,0.560677600142307,6.4049397437823,1.97334038733728,2.17847724779836,4.84958419450877,6.21155231831143,0.756787138224657,0.576175924479999,0.234321431833797,4.05808099879417,2.2818872861778,4.78235777765763,5.63685593490071,4.20869655357142,6.32028630160118,3.0623125688234,6.75588745214724,2.27316718586684,13.0680314301026,5.68713937340681,1.82032272387605,1.43723628363248,6.06010010234638,5.75545191411035,4.43302584774693,7.46261955497424,4.90380473278431,6.61047459189026,3.62982986112067,1.4351170855109,2.13557388818567,3.60284231971255,1.50045548042201,3.91599611106068,0.257640540045629,1.67505170698431,2.86919764810153,2.43592512902997,1.00973509697646,2.94559675655358,1.77810662500693,0,3.92933183087797,4.2390148077621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854961,1.35636710655613,1.92431614317159,3.02756028967656,0.190941474834495,0.606351566874658,6.96693593270276,2.73786640868225,5.79227655925453,6.09638745837749,0.665320713092027,9.36137589026207,10.886189279527,9.653614114347,2.42528045687785,4.69281884806909,0.488965776731466,4.06896178315738,0,1.00636896795513,5.44966436915496|short_description=p2@ARNTL2}}
|DPIdataset=robustDPI
|EntrezGene=56938
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18984
|TSSclassifier=S
|UniProt=F5H402
|association_with_transcript=0bp_to_ENST00000395901,ENST00000546179,uc001rhw.2,uc010sjp.1_5end
|coexpression_cluster_id=C3273
|description=CAGE_peak_2_at_ARNTL2_5end
|id=chr12:27485823..27485868,+
|ontology_enrichment_celltype=CL:0000066!3.23e-12!254;CL:0000220!3.31e-12!246;CL:0002321!6.47e-12!248;CL:0000076!2.99e-08!62;CL:0000359!3.87e-08!32;CL:0000222!1.05e-07!119;CL:0002076!1.65e-07!43
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-07;32
|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-12,253;CL:0002321,4.40e-12,250;CL:0002076,2.01e-08,42;CL:0000359,3.02e-08,32;CL:0000076,1.13e-07,63;CL:0000222,1.39e-07,121;CL:0000223,3.45e-07,58
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000055!6.42e-11!69;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0002049!1.81e-09!79;UBERON:0007798!1.81e-09!79;UBERON:0001637!1.62e-08!42;UBERON:0003509!1.62e-08!42;UBERON:0004572!1.62e-08!42;UBERON:0004111!6.76e-08!241;UBERON:0000490!8.72e-08!138;UBERON:0000119!1.50e-07!312;UBERON:0000483!1.87e-07!309;UBERON:0000480!9.31e-07!626
|ontology_enrichment_uberon_v019=
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|short_description=p2@ARNTL2
}}

Revision as of 22:19, 10 September 2013

Short description:p2@ARNTL2
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_ARNTL2_5end
Coexpression cluster:C3273_osteosarcoma_endometrial_embryonic_astrocytoma_mucinous_Myoblast_prostate
Association with transcript: 0bp_to_ENST00000395901, ENST00000546179, uc001rhw.2, uc010sjp.1_5end
EntrezGene:ARNTL2
HGNC: 18984
UniProt: F5H402
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.