FFCP PHASE1:Hg19::chr12:32259696..32259794,+: Difference between revisions
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{{FFCP | 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9.02248679156903,18.0973166352613,28.2648080976017,7.60052752859992,3.77735275701072,8.08198773038206,16.4040367697246,9.82361135077247,3.00218227924896,9.91778309467804,19.4967095940554,8.10328660133419,8.3210479532199,8.77535321299288,4.63202170741458,4.60496504115285,9.89459217296934,8.87404576046208,15.7116469807358,49.7108546060617,6.56317649289277,9.72351859767623,22.5361250927321,3.50748555910899,5.31459361253452,3.10774249086104,8.84546591885314,8.8478247151339,6.55067582411744,6.19960927150283,5.65466167378947,14.2938433118477,11.9178350249036,11.7827808161178,5.59518030877778,8.70908164046162,63.0519250527003,15.5267728411222,2.83078695340614,40.5167757692372,7.80769637788516,23.8083910513885,7.93188891257614,5.58644917973244,9.22212616894914,11.1195060451767,13.609702720853,3.52675943690684,11.3310826620684,18.8833921783591,25.5053837386053,25.5414174491442,18.6655891459087,35.0379657748188,15.2837527945922,19.538553121454,19.9877188362816,10.4036581611087,10.4993053779489,7.15371534234548,7.16259130132097,12.5856091504165,14.4975584472621,8.75231377311609,20.6828402960457,39.5341934658899,3.90757005616546,2.09525355585138,8.51613971052503,14.4898964492704,21.6795646625047,11.7161714792077,22.7355476151302,17.8832584746817,40.4761358673482,2.19303106742873,8.435590032618,6.33136479694634,3.57734797390867,12.3211422252006,10.7610791110024,16.3880713143891,17.0746643513473,10.4668796791914,10.8319948302433,16.6343369154296,12.1665822028529,17.1009211263408,7.68259965745793,5.00541308514311,9.34067804921117,12.2550160134481,9.80952571598262,24.6552854537564,42.9695906525057,61.6299677374295,10.4355754497918,25.9142323241672,37.6622218192726,5.21574816907738,10.4222477414933,7.25256574570629,4.7801173586306,4.14755797088455,1.29068207646083,8.40157205187014,8.09527345211998,8.46774100381858,29.3256791736384,35.9839407370611,44.9103301319394,22.4829417913563,16.1947885465151,7.43699342391843,5.17943069750316,6.46775683194356,4.6392577253528,9.71421986118279,14.7381861981127,22.0835360429119,9.27576708065035,11.294608203896,68.8227634826386,10.4164362061005,3.00979216620984,4.5897507705831,17.4017399653763,10.0510811919101,12.0195039021829,14.7231350336209,20.1991552222418,23.6687207446704,10.5354811106446,14.2855555329377,19.1439927281524,10.5937625280425,13.7486532726356,31.7605384544123,25.8377200739122,9.49437304720472,3.21110498383179,13.330581233085,4.25983217921598,14.346204430283,41.8896662726762,9.52248312927721,13.391820654003,7.39481005810269,5.19151874548547,22.5837900454791,46.656399228498,19.8916646587956,101.478885593272,864.715523439354,655.486318382049,46.8823098476741,6.82008283964155,8.57485216499771,10.7792027129641,17.3767433047984,7.88965733033629,7.14193294391221,16.0826385491655,24.457437432568,6.61577989225619,3.11871075563008,12.5312657154096,4.35433495793923,4.79126621519393,11.9886654365966,8.03288700397975,6.65320713092027,9.76839223331694,13.0207361970813,13.5150597600858,14.7313331454802,4.69281884806909,20.169838290173,19.1241203808397,9.32059483859718,15.095534519327,7.05250683067112|short_description=p1@BICD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000551848_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_1_at_BICD1_5end | |||
|id=chr12:32259696..32259794,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.16e-09!235;DOID:14566!1.19e-08!239;DOID:193!5.97e-08!29;DOID:0050687!6.98e-08!143;DOID:120!5.30e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:193;4.12e-08;29!DOID:120;3.76e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.05e-09,235;DOID:14566,1.17e-08,239;DOID:193,5.97e-08,29;DOID:0050687,6.98e-08,143;DOID:120,5.30e-07,27 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.52e-11;32!UBERON:0001893;1.76e-11;34!UBERON:0002791;2.53e-11;32!UBERON:0000956;2.88e-11;25!UBERON:0000203;2.88e-11;25!UBERON:0003528;3.85e-11;34!UBERON:0002020;3.85e-11;34!UBERON:0002780;8.88e-11;41!UBERON:0001890;8.88e-11;41!UBERON:0000073;1.56e-09;53!UBERON:0002616;1.56e-09;53!UBERON:0002619;1.58e-09;22!UBERON:0001017;2.48e-09;75!UBERON:0001950;8.41e-09;20!UBERON:0000955;9.84e-09;68!UBERON:0001016;1.36e-08;83 | |||
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| |||
|short_description=p1@BICD1 | |||
}} |
Revision as of 22:28, 10 September 2013
Short description: | p1@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BICD1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.73e-24 | 81 |
nervous system | 8.03e-24 | 89 |
brain | 1.87e-18 | 68 |
future brain | 1.87e-18 | 68 |
neural tube | 1.41e-16 | 56 |
neural rod | 1.41e-16 | 56 |
future spinal cord | 1.41e-16 | 56 |
neural keel | 1.41e-16 | 56 |
neural plate | 2.01e-15 | 82 |
presumptive neural plate | 2.01e-15 | 82 |
regional part of nervous system | 2.05e-15 | 53 |
regional part of brain | 2.05e-15 | 53 |
neurectoderm | 4.57e-15 | 86 |
regional part of forebrain | 2.54e-14 | 41 |
forebrain | 2.54e-14 | 41 |
anterior neural tube | 2.54e-14 | 41 |
future forebrain | 2.54e-14 | 41 |
pre-chordal neural plate | 4.09e-13 | 61 |
telencephalon | 4.56e-13 | 34 |
brain grey matter | 8.83e-13 | 34 |
gray matter | 8.83e-13 | 34 |
cerebral hemisphere | 1.42e-12 | 32 |
regional part of telencephalon | 2.89e-12 | 32 |
cerebral cortex | 2.68e-11 | 25 |
pallium | 2.68e-11 | 25 |
ectoderm-derived structure | 9.51e-11 | 171 |
ectoderm | 9.51e-11 | 171 |
presumptive ectoderm | 9.51e-11 | 171 |
structure with developmental contribution from neural crest | 1.91e-10 | 132 |
ecto-epithelium | 1.25e-09 | 104 |
regional part of cerebral cortex | 1.45e-09 | 22 |
neocortex | 7.29e-09 | 20 |
organ system subdivision | 1.06e-08 | 223 |
tube | 4.74e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.05e-09 | 235 |
disease of cellular proliferation | 1.17e-08 | 239 |
reproductive organ cancer | 5.97e-08 | 29 |
cell type cancer | 6.98e-08 | 143 |
female reproductive organ cancer | 5.30e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.