FFCP PHASE1:Hg19::chr12:4872943..4872966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4130|TSSclassifier=N|UniProt=|association_with_transcript=-167bp_to_ENST00000535354_5end|coexpression_cluster_id=C114|description=CAGE_peak_2_at_GALNT8_5end|id=chr12:4872943..4872966,+|ontology_enrichment_celltype=CL:0002322!1.21e-10!5;CL:0000188!1.43e-07!9|ontology_enrichment_celltype_v019=CL:0002322;4.01e-30;5!CL:0002166;7.18e-14;3!CL:0002553;2.79e-11;1!CL:0000167;1.21e-10;1!CL:0000164;1.21e-10;1!CL:0000502;1.21e-10;1!CL:0000172;1.21e-10;1!CL:0000173;1.21e-10;1!CL:0002321;3.17e-10;15!CL:0000148;4.96e-09;10!CL:0002077;7.07e-09;34!CL:0002159;8.61e-07;14|ontology_enrichment_celltype_v019_2=CL:0002322,1.81e-30,5;CL:0002166,7.42e-14,3;CL:0002553,2.79e-11,1;CL:0000167,1.33e-10,1;CL:0000164,1.33e-10,1;CL:0000502,1.33e-10,1;CL:0000172,1.33e-10,1;CL:0000173,1.33e-10,1;CL:0002351,1.33e-10,1;CL:0002077,9.28e-10,34;CL:0000148,3.92e-09,10;CL:0000541,3.92e-09,10;CL:0002159,8.52e-07,14|ontology_enrichment_development_v019=CL:0002351;1.21e-10;1!UBERON:0009117;4.96e-09;10!UBERON:0005564;4.96e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;1.21e-10;1!DOID:4430;1.21e-10;1!DOID:3095;3.89e-07;22!DOID:2994;3.89e-07;22|ontology_enrichment_disease_v019_2=DOID:9119,1.10e-10,1;DOID:4430,1.33e-10,1;DOID:3095,3.98e-07,22;DOID:2994,3.98e-07,22|ontology_enrichment_uberon=UBERON:0007023!1.99e-16!115;UBERON:0005743!1.05e-09!86;UBERON:0001017!9.53e-09!82;UBERON:0000473!1.13e-08!8;UBERON:0000073!4.14e-08!94;UBERON:0001016!4.14e-08!94;UBERON:0002346!4.93e-08!90;UBERON:0003135!4.99e-08!11;UBERON:0003075!6.64e-08!86;UBERON:0007284!6.64e-08!86;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001894!3.08e-07!7;UBERON:0006222!3.08e-07!7|ontology_enrichment_uberon_v019=UBERON:0000473;3.72e-11;8!UBERON:0001708;1.24e-10;4!UBERON:0008895;1.24e-10;4!UBERON:0011159;1.11e-08;5!UBERON:0003135;2.96e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.35e-11,8;UBERON:0001708,1.27e-10,4;UBERON:0008895,1.27e-10,4;UBERON:0011159,1.13e-08,5;UBERON:0003135,3.32e-08,11;UBERON:0010188,2.30e-07,6;UBERON:0002539,2.30e-07,6;UBERON:0008816,2.30e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45471508531751,0,1.46368447355514,0.530119073285941,1.74290914304278,1.96956004529204,2.77552935963191,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,2.51973192298289,3.1190521393325,0,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.412618309791701,1.24632101408756,0,0,0.182248669974074,0,0.394028536495991,0.157363764404994,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0.285465333544967,0.235265819698172,0,4.6374729155464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4130 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-167bp_to_ENST00000535354_5end | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_2_at_GALNT8_5end | |||
|id=chr12:4872943..4872966,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.21e-10!5;CL:0000188!1.43e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.01e-30;5!CL:0002166;7.18e-14;3!CL:0002553;2.79e-11;1!CL:0000167;1.21e-10;1!CL:0000164;1.21e-10;1!CL:0000502;1.21e-10;1!CL:0000172;1.21e-10;1!CL:0000173;1.21e-10;1!CL:0002321;3.17e-10;15!CL:0000148;4.96e-09;10!CL:0002077;7.07e-09;34!CL:0002159;8.61e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.81e-30,5;CL:0002166,7.42e-14,3;CL:0002553,2.79e-11,1;CL:0000167,1.33e-10,1;CL:0000164,1.33e-10,1;CL:0000502,1.33e-10,1;CL:0000172,1.33e-10,1;CL:0000173,1.33e-10,1;CL:0002351,1.33e-10,1;CL:0002077,9.28e-10,34;CL:0000148,3.92e-09,10;CL:0000541,3.92e-09,10;CL:0002159,8.52e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002351;1.21e-10;1!UBERON:0009117;4.96e-09;10!UBERON:0005564;4.96e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;1.21e-10;1!DOID:4430;1.21e-10;1!DOID:3095;3.89e-07;22!DOID:2994;3.89e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.10e-10,1;DOID:4430,1.33e-10,1;DOID:3095,3.98e-07,22;DOID:2994,3.98e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-16!115;UBERON:0005743!1.05e-09!86;UBERON:0001017!9.53e-09!82;UBERON:0000473!1.13e-08!8;UBERON:0000073!4.14e-08!94;UBERON:0001016!4.14e-08!94;UBERON:0002346!4.93e-08!90;UBERON:0003135!4.99e-08!11;UBERON:0003075!6.64e-08!86;UBERON:0007284!6.64e-08!86;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001894!3.08e-07!7;UBERON:0006222!3.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.72e-11;8!UBERON:0001708;1.24e-10;4!UBERON:0008895;1.24e-10;4!UBERON:0011159;1.11e-08;5!UBERON:0003135;2.96e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.35e-11,8;UBERON:0001708,1.27e-10,4;UBERON:0008895,1.27e-10,4;UBERON:0011159,1.13e-08,5;UBERON:0003135,3.32e-08,11;UBERON:0010188,2.30e-07,6;UBERON:0002539,2.30e-07,6;UBERON:0008816,2.30e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45471508531751,0,1.46368447355514,0.530119073285941,1.74290914304278,1.96956004529204,2.77552935963191,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,2.51973192298289,3.1190521393325,0,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.412618309791701,1.24632101408756,0,0,0.182248669974074,0,0.394028536495991,0.157363764404994,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0.285465333544967,0.235265819698172,0,4.6374729155464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80627823114017,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.225630985047772,4.0341013740704,0,0,0,0.443568258651136,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,4.03540466662589,0.606965604236632,0.91064876540519,0,0,0,0.40781839786099,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0.935757853848423,0,0,0.22589216407792,0,0,0.154348316215889,0,0,0,1.17838273550813,0,0.594092800654172,0,0,0,0,0,0,0.352894871715692,0,0,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.546327859818478,19.8916646587956,0.407955318967927,2.93939145792117,1.10273879441814,0,0.606229585745915,1.07185652062471,0.829169439458779,0.620597975171371,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@GALNT8 | |||
}} |
Revision as of 22:49, 10 September 2013
Short description: | p2@GALNT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GALNT8_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | -167bp_to_ENST00000535354_5end |
EntrezGene: | GALNT8 |
HGNC: | 4130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.81e-30 | 5 |
epithelial cell of Malassez | 7.42e-14 | 3 |
lung fibroblast | 2.79e-11 | 1 |
peptide hormone secreting cell | 1.33e-10 | 1 |
enteroendocrine cell | 1.33e-10 | 1 |
type D enteroendocrine cell | 1.33e-10 | 1 |
somatostatin secreting cell | 1.33e-10 | 1 |
pancreatic D cell | 1.33e-10 | 1 |
progenitor cell of endocrine pancreas | 1.33e-10 | 1 |
ecto-epithelial cell | 9.28e-10 | 34 |
melanocyte | 3.92e-09 | 10 |
melanoblast | 3.92e-09 | 10 |
general ecto-epithelial cell | 8.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.35e-11 | 8 |
jaw skeleton | 1.27e-10 | 4 |
splanchnocranium | 1.27e-10 | 4 |
primary subdivision of cranial skeletal system | 1.13e-08 | 5 |
male reproductive organ | 3.32e-08 | 11 |
protuberance | 2.30e-07 | 6 |
pharyngeal arch | 2.30e-07 | 6 |
embryonic head | 2.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.10e-10 | 1 |
somatostatinoma | 1.33e-10 | 1 |
germ cell and embryonal cancer | 3.98e-07 | 22 |
germ cell cancer | 3.98e-07 | 22 |
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