FFCP PHASE1:Hg19::chr12:52626432..52626475,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000546666_5end | |||
|coexpression_cluster_id=C3290 | |||
|description=CAGE_peak_2_at_KRT7_5end | |||
|id=chr12:52626432..52626475,+ | |||
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|ontology_enrichment_celltype_v019=CL:0002139;4.11e-14;24!CL:0000213;1.45e-12;58!CL:0000215;1.45e-12;58!CL:0000071;3.46e-12;18!CL:0000115;1.98e-11;36!CL:0002078;2.34e-11;45!CL:0000077;6.69e-11;19!CL:1000449;2.01e-10;15!CL:1000413;4.03e-09;9!CL:0002681;7.49e-09;12!CL:0002584;7.49e-09;12!CL:1000497;1.33e-08;17!CL:0002518;1.33e-08;17!CL:0000076;2.22e-08;63!CL:0002368;1.26e-07;13!CL:1000507;3.45e-07;10!CL:1000494;3.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.51e-46,253;CL:0000213,6.22e-23,58;CL:0000215,6.22e-23,58;CL:0000076,2.66e-16,63;CL:0002078,5.22e-16,45;CL:0002139,2.43e-14,24;CL:0000115,1.77e-13,36;CL:0000071,3.06e-12,18;CL:0002546,3.06e-12,18;CL:0000077,6.07e-11,19;CL:1000449,1.90e-10,15;CL:0002321,2.03e-10,250;CL:0000222,3.56e-09,121;CL:1000413,4.24e-09,9;CL:0002681,8.10e-09,12;CL:0002584,8.10e-09,12;CL:1000497,1.26e-08,17;CL:0002518,1.26e-08,17;CL:0002076,2.39e-08,42;CL:0002368,1.41e-07,13;CL:1000507,3.39e-07,10;CL:1000494,3.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;3.46e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!9.85e-14!104;UBERON:0001048!1.79e-13!168;UBERON:0000466!2.13e-12!126;UBERON:0000487!1.73e-11!22;UBERON:0006914!5.62e-11!25;UBERON:0004119!7.99e-11!169;UBERON:0000925!7.99e-11!169;UBERON:0006595!7.99e-11!169;UBERON:0001986!1.01e-10!18;UBERON:0004638!1.01e-10!18;UBERON:0004852!1.01e-10!18;UBERON:0002553!1.59e-10!70;UBERON:0000058!9.03e-10!26;UBERON:0000477!9.06e-10!286;UBERON:0003886!1.10e-09!63;UBERON:0000077!6.73e-09!130;UBERON:0002100!1.06e-08!216;UBERON:0007625!1.67e-08!11;UBERON:0003914!2.54e-08!118;UBERON:0000065!3.35e-08!53;UBERON:0008947!3.85e-08!38;UBERON:0003258!3.85e-08!38;UBERON:0009569!6.24e-08!113;UBERON:0003104!7.50e-08!238;UBERON:0009142!7.50e-08!238;UBERON:0003064!8.36e-08!37;UBERON:0000080!8.63e-08!18;UBERON:0002120!8.63e-08!18;UBERON:0004875!8.63e-08!18;UBERON:0005721!8.63e-08!18;UBERON:0005754!8.63e-08!18;UBERON:0007297!8.63e-08!18;UBERON:0006555!9.52e-08!17;UBERON:0005103!9.52e-08!17;UBERON:0000083!9.52e-08!17;UBERON:0009201!9.52e-08!17;UBERON:0004819!9.52e-08!17;UBERON:0006553!9.52e-08!17;UBERON:0003074!9.52e-08!17;UBERON:0003060!9.52e-08!17;UBERON:0004211!1.31e-07!16;UBERON:0001285!1.31e-07!16;UBERON:0007684!1.31e-07!16;UBERON:0003220!1.31e-07!16;UBERON:0004208!1.31e-07!16;UBERON:0004876!1.52e-07!20;UBERON:0003915!1.72e-07!9;UBERON:0004700!1.72e-07!9;UBERON:0001917!1.72e-07!9;UBERON:0001004!1.82e-07!72;UBERON:0002049!2.06e-07!79;UBERON:0007798!2.06e-07!79;UBERON:0000063!2.23e-07!97;UBERON:0001007!2.33e-07!155;UBERON:0001555!2.33e-07!155;UBERON:0007026!2.33e-07!155;UBERON:0001041!3.08e-07!98;UBERON:0000119!3.24e-07!312;UBERON:0001737!4.78e-07!9;UBERON:0005085!5.21e-07!29;UBERON:0000467!6.01e-07!625;UBERON:0000483!7.94e-07!309;UBERON:0000480!8.08e-07!626;UBERON:0000468!9.03e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.70e-13;33!UBERON:0000487;1.99e-13;22!UBERON:0006914;4.76e-13;25!UBERON:0004638;3.46e-12;18!UBERON:0001986;3.46e-12;18!UBERON:0004852;3.46e-12;18!UBERON:0006555;2.01e-10;15!UBERON:0004819;2.01e-10;15!UBERON:0001285;2.01e-10;15!UBERON:0007684;2.01e-10;15!UBERON:0007625;2.17e-10;11!UBERON:0003915;4.03e-09;9!UBERON:0004700;4.03e-09;9!UBERON:0001917;4.03e-09;9!UBERON:0001225;7.49e-09;12!UBERON:0008987;7.49e-09;12!UBERON:0000353;9.39e-09;15!UBERON:0001737;1.50e-08;9!UBERON:0001557;1.50e-08;9!UBERON:0001851;1.81e-07;15!UBERON:0004211;3.45e-07;10!UBERON:0009773;3.45e-07;10!UBERON:0001231;3.45e-07;10!UBERON:0004810;3.45e-07;10!UBERON:0000065;5.53e-07;44 | |||
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| |||
|short_description=p2@KRT7 | |||
}} |
Revision as of 23:07, 10 September 2013
Short description: | p2@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KRT7_5end |
Coexpression cluster: | C3290_Endothelial_Retinal_Alveolar_thyroid_papillary_anaplastic_Ciliary |
Association with transcript: | 0bp_to_ENST00000546666_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.51e-46 | 253 |
lining cell | 6.22e-23 | 58 |
barrier cell | 6.22e-23 | 58 |
squamous epithelial cell | 2.66e-16 | 63 |
meso-epithelial cell | 5.22e-16 | 45 |
endothelial cell of vascular tree | 2.43e-14 | 24 |
endothelial cell | 1.77e-13 | 36 |
blood vessel endothelial cell | 3.06e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.06e-12 | 18 |
mesothelial cell | 6.07e-11 | 19 |
epithelial cell of nephron | 1.90e-10 | 15 |
embryonic cell | 2.03e-10 | 250 |
mesodermal cell | 3.56e-09 | 121 |
endothelial cell of artery | 4.24e-09 | 9 |
kidney cortical cell | 8.10e-09 | 12 |
renal cortical epithelial cell | 8.10e-09 | 12 |
kidney cell | 1.26e-08 | 17 |
kidney epithelial cell | 1.26e-08 | 17 |
endo-epithelial cell | 2.39e-08 | 42 |
respiratory epithelial cell | 1.41e-07 | 13 |
kidney tubule cell | 3.39e-07 | 10 |
nephron tubule epithelial cell | 3.39e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.68e-13 | 22 |
squamous epithelium | 3.98e-13 | 25 |
blood vessel endothelium | 3.06e-12 | 18 |
endothelium | 3.06e-12 | 18 |
cardiovascular system endothelium | 3.06e-12 | 18 |
excretory tube | 1.39e-10 | 16 |
kidney epithelium | 1.39e-10 | 16 |
nephron epithelium | 1.90e-10 | 15 |
renal tubule | 1.90e-10 | 15 |
nephron tubule | 1.90e-10 | 15 |
nephron | 1.90e-10 | 15 |
uriniferous tubule | 1.90e-10 | 15 |
nephrogenic mesenchyme | 1.90e-10 | 15 |
pigment epithelium of eye | 2.21e-10 | 11 |
primordium | 3.47e-09 | 160 |
endothelial tube | 4.24e-09 | 9 |
arterial system endothelium | 4.24e-09 | 9 |
endothelium of artery | 4.24e-09 | 9 |
cortex of kidney | 8.10e-09 | 12 |
renal parenchyma | 8.10e-09 | 12 |
parenchyma | 8.81e-09 | 15 |
larynx | 1.55e-08 | 9 |
epithelial tube | 5.65e-08 | 117 |
respiratory primordium | 8.03e-08 | 38 |
endoderm of foregut | 8.03e-08 | 38 |
subdivision of trunk | 8.21e-08 | 112 |
cortex | 1.83e-07 | 15 |
anatomical cavity | 3.31e-07 | 61 |
nephron tubule epithelium | 3.39e-07 | 10 |
extraembryonic membrane | 4.16e-07 | 14 |
membranous layer | 4.16e-07 | 14 |
respiratory tract | 4.33e-07 | 54 |
urinary system structure | 5.73e-07 | 47 |
duct | 7.82e-07 | 19 |
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