FFCP PHASE1:Hg19::chr12:58026451..58026469,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4117|TSSclassifier=S|UniProt=F8VU35,Q8N636|association_with_transcript=0bp_to_ENST00000548888,ENST00000550943,ENST00000551925,ENST00000552350,uc001sph.2,uc010sru.1,uc010srw.1_5end|description=CAGE_peak_2_at_B4GALNT1_5end|id=chr12:58026451..58026469,-|ontology_enrichment_celltype=CL:0000055!3.54e-10!180;CL:0002319!2.28e-09!25;CL:0000359!1.09e-07!32;CL:0000095!1.17e-07!17;CL:0000123!1.17e-07!17;CL:0000243!3.26e-07!15;CL:0000125!3.26e-07!15;CL:0000030!3.26e-07!15;CL:0000339!3.26e-07!15|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006238;3.45e-07;10|ontology_enrichment_disease=DOID:0050687!1.29e-08!143;DOID:1115!1.81e-08!20;DOID:14566!7.45e-07!239|ontology_enrichment_disease_v019=DOID:1115;1.75e-08;20|ontology_enrichment_disease_v019_2=DOID:1115,1.39e-08,20|ontology_enrichment_uberon=UBERON:0001017!2.51e-27!82;UBERON:0000073!5.76e-27!94;UBERON:0001016!5.76e-27!94;UBERON:0005743!1.18e-25!86;UBERON:0000955!1.83e-24!69;UBERON:0006238!1.83e-24!69;UBERON:0001049!8.87e-21!57;UBERON:0005068!8.87e-21!57;UBERON:0006241!8.87e-21!57;UBERON:0007135!8.87e-21!57;UBERON:0002616!1.01e-18!59;UBERON:0002020!1.94e-16!34;UBERON:0003528!1.94e-16!34;UBERON:0001869!2.72e-16!32;UBERON:0001893!2.98e-16!34;UBERON:0002780!6.01e-16!41;UBERON:0001890!6.01e-16!41;UBERON:0006240!6.01e-16!41;UBERON:0002791!1.12e-15!33;UBERON:0003080!3.34e-15!42;UBERON:0003075!3.82e-15!86;UBERON:0007284!3.82e-15!86;UBERON:0004121!6.39e-15!169;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0000924!3.59e-14!173;UBERON:0006601!3.59e-14!173;UBERON:0002346!6.15e-14!90;UBERON:0002619!1.64e-13!22;UBERON:0000033!2.56e-12!123;UBERON:0001950!3.53e-12!20;UBERON:0000475!5.01e-12!365;UBERON:0000153!2.51e-11!129;UBERON:0007811!2.51e-11!129;UBERON:0000025!5.45e-11!194;UBERON:0004111!3.36e-10!241;UBERON:0007023!1.40e-09!115;UBERON:0003056!2.57e-08!61;UBERON:0000483!3.33e-07!309;UBERON:0000477!3.44e-07!286;UBERON:0004733!3.94e-07!12;UBERON:0002028!3.94e-07!12;UBERON:0007277!3.94e-07!12;UBERON:0004573!5.22e-07!33;UBERON:0004571!5.22e-07!33;UBERON:0000119!5.52e-07!312;UBERON:0001637!6.37e-07!42;UBERON:0003509!6.37e-07!42;UBERON:0004572!6.37e-07!42;UBERON:0003076!7.68e-07!15;UBERON:0003057!7.68e-07!15|ontology_enrichment_uberon_v019=UBERON:0002619;2.19e-17;22!UBERON:0000956;1.75e-16;25!UBERON:0000203;1.75e-16;25!UBERON:0001869;3.80e-15;32!UBERON:0001950;4.11e-15;20!UBERON:0002791;1.44e-13;32!UBERON:0003528;2.32e-13;34!UBERON:0002020;2.32e-13;34!UBERON:0001893;3.66e-13;34!UBERON:0000073;9.06e-11;53!UBERON:0002616;9.06e-11;53!UBERON:0002780;1.21e-10;41!UBERON:0001890;1.21e-10;41!UBERON:0000955;1.51e-10;68!UBERON:0001017;4.20e-09;75!UBERON:0001016;5.95e-09;83!UBERON:0001872;1.23e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.52e-27,89;UBERON:0001017,1.58e-26,81;UBERON:0000955,1.89e-21,68;UBERON:0006238,1.89e-21,68;UBERON:0000073,2.77e-18,53;UBERON:0002616,2.77e-18,53;UBERON:0001049,4.68e-18,56;UBERON:0005068,4.68e-18,56;UBERON:0006241,4.68e-18,56;UBERON:0007135,4.68e-18,56;UBERON:0002619,6.50e-18,22;UBERON:0000956,5.97e-17,25;UBERON:0000203,5.97e-17,25;UBERON:0001869,8.69e-17,32;UBERON:0001950,1.77e-15,20;UBERON:0001893,1.91e-15,34;UBERON:0003528,2.79e-15,34;UBERON:0002020,2.79e-15,34;UBERON:0002791,3.96e-15,32;UBERON:0002780,3.75e-14,41;UBERON:0001890,3.75e-14,41;UBERON:0003080,3.75e-14,41;UBERON:0006240,3.75e-14,41;UBERON:0004121,4.01e-12,171;UBERON:0000924,4.01e-12,171;UBERON:0006601,4.01e-12,171;UBERON:0003075,2.03e-11,82;UBERON:0007284,2.03e-11,82;UBERON:0011216,5.81e-11,223;UBERON:0010314,1.71e-10,132;UBERON:0002346,1.81e-10,86;UBERON:0000025,1.20e-09,192;UBERON:0003056,1.96e-08,61;UBERON:0010371,7.13e-08,104;UBERON:0001872,1.05e-07,5;UBERON:0004111,1.45e-07,240|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0.984968464614303,0.204000691244253,1.88072832886853,1.43117993565528,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02608818663328,1.45650098894541,3.44203944898576,1.06400514659507,0,2.1349799145941,0.98667019366864,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,2.19488810440419,1.5324389789951,0.300476117813194,0,0.358779271377724,0,0,1.80054657650641,1.03052529238439,0.257640540045629,0.37223371266318,2.53164498361899,1.46155507741798,0.252433774244115,0.184099797284599,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4117 | |||
|TSSclassifier=S | |||
|UniProt=F8VU35,Q8N636 | |||
|association_with_transcript=0bp_to_ENST00000548888,ENST00000550943,ENST00000551925,ENST00000552350,uc001sph.2,uc010sru.1,uc010srw.1_5end | |||
|description=CAGE_peak_2_at_B4GALNT1_5end | |||
|id=chr12:58026451..58026469,- | |||
|ontology_enrichment_celltype=CL:0000055!3.54e-10!180;CL:0002319!2.28e-09!25;CL:0000359!1.09e-07!32;CL:0000095!1.17e-07!17;CL:0000123!1.17e-07!17;CL:0000243!3.26e-07!15;CL:0000125!3.26e-07!15;CL:0000030!3.26e-07!15;CL:0000339!3.26e-07!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.45e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.29e-08!143;DOID:1115!1.81e-08!20;DOID:14566!7.45e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.75e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.39e-08,20 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-27!82;UBERON:0000073!5.76e-27!94;UBERON:0001016!5.76e-27!94;UBERON:0005743!1.18e-25!86;UBERON:0000955!1.83e-24!69;UBERON:0006238!1.83e-24!69;UBERON:0001049!8.87e-21!57;UBERON:0005068!8.87e-21!57;UBERON:0006241!8.87e-21!57;UBERON:0007135!8.87e-21!57;UBERON:0002616!1.01e-18!59;UBERON:0002020!1.94e-16!34;UBERON:0003528!1.94e-16!34;UBERON:0001869!2.72e-16!32;UBERON:0001893!2.98e-16!34;UBERON:0002780!6.01e-16!41;UBERON:0001890!6.01e-16!41;UBERON:0006240!6.01e-16!41;UBERON:0002791!1.12e-15!33;UBERON:0003080!3.34e-15!42;UBERON:0003075!3.82e-15!86;UBERON:0007284!3.82e-15!86;UBERON:0004121!6.39e-15!169;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0000924!3.59e-14!173;UBERON:0006601!3.59e-14!173;UBERON:0002346!6.15e-14!90;UBERON:0002619!1.64e-13!22;UBERON:0000033!2.56e-12!123;UBERON:0001950!3.53e-12!20;UBERON:0000475!5.01e-12!365;UBERON:0000153!2.51e-11!129;UBERON:0007811!2.51e-11!129;UBERON:0000025!5.45e-11!194;UBERON:0004111!3.36e-10!241;UBERON:0007023!1.40e-09!115;UBERON:0003056!2.57e-08!61;UBERON:0000483!3.33e-07!309;UBERON:0000477!3.44e-07!286;UBERON:0004733!3.94e-07!12;UBERON:0002028!3.94e-07!12;UBERON:0007277!3.94e-07!12;UBERON:0004573!5.22e-07!33;UBERON:0004571!5.22e-07!33;UBERON:0000119!5.52e-07!312;UBERON:0001637!6.37e-07!42;UBERON:0003509!6.37e-07!42;UBERON:0004572!6.37e-07!42;UBERON:0003076!7.68e-07!15;UBERON:0003057!7.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.19e-17;22!UBERON:0000956;1.75e-16;25!UBERON:0000203;1.75e-16;25!UBERON:0001869;3.80e-15;32!UBERON:0001950;4.11e-15;20!UBERON:0002791;1.44e-13;32!UBERON:0003528;2.32e-13;34!UBERON:0002020;2.32e-13;34!UBERON:0001893;3.66e-13;34!UBERON:0000073;9.06e-11;53!UBERON:0002616;9.06e-11;53!UBERON:0002780;1.21e-10;41!UBERON:0001890;1.21e-10;41!UBERON:0000955;1.51e-10;68!UBERON:0001017;4.20e-09;75!UBERON:0001016;5.95e-09;83!UBERON:0001872;1.23e-07;5 | |||
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| |||
|short_description=p2@B4GALNT1 | |||
}} |
Revision as of 23:43, 10 September 2013
Short description: | p2@B4GALNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B4GALNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000548888, ENST00000550943, ENST00000551925, ENST00000552350, uc001sph.2, uc010sru.1, uc010srw.1_5end |
EntrezGene: | B4GALNT1 |
HGNC: | 4117 |
UniProt: | F8VU35Q8N636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.39e-08 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.