FFCP PHASE1:Hg19::chr12:6879133..6879172,-: Difference between revisions
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{{FFCP | 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7662191351298,1.95145214357805,0.691403925334676,3.77273620762321,1.22345519358297,4.01213918733379,5.2005289988946,4.11556187000656,5.80848887093804,4.08500533781605,2.80272163313789,16.4368569691709,2.15927591218621,2.8665101273223,3.07349139959622,11.6930072682218,7.78817549966439,3.82488199065675,0,2.07216164163037,3.92652497316085,2.07377898544228,3.44181887056222,2.01164401241961,1.70426809518315,2.54032230114557,2.52017555398455,2.79185747097888,0.955538938977433,1.56597604516909,1.57040373784389,4.99863492427305,0,0.718639647993729,4.6392577253528,8.25708688200537,15.440004588499,7.16222790580926,2.02164154321867,4.85668152767528,7.25607410519832,1.05673990496671,1.77500563648273,3.93407208907123,0.940634592723046,5.39326307858592,5.89191367754065,4.3187862765288,1.78227840196252,8.0304588240846,3.39854229375634,2.6315497034359,1.61144719933943,1.09935271517422,2.32120120187355,2.47026410200984,0.722172300202514,2.19100916473955,0.458729283404541,1.29005624836306,12.779496537648,4.01149792126397,17.8903783039555,4.2322147241232,7.06790534516827,7.39481005810269,8.65253124247578,6.93915336592934,8.30418346924086,28.6338612285848,6.1193297845189,2.13773924212448,2.20547758883628,6.76910356089413,2.80381183407486,1.33982065078089,0.829169439458779,2.27552590896169,1.70587185520785,7.85612623830343,0.968833647540092,0.31037357147929,3.58821960257963,3.05506359735192,7.88257036937055,1.74173398317569,6.50243272062034,1.21233695426258,3.15577703727776,7.31852784401229,0.407016343054873,7.68436890319551,3.8614456457388,5.29968692428863,7.03922827210363,5.25638209986326,8.13792356631477,7.98908129022615,1.40891655513718,1.28227396921293|short_description=p@chr12:6879133..6879172,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3321 | |||
|description=CAGE_peak_at_chr12:6879133..6879172,- | |||
|id=chr12:6879133..6879172,- | |||
|ontology_enrichment_celltype=CL:0000055!1.97e-20!180;CL:0002321!2.34e-17!248;CL:0000220!2.57e-17!246;CL:0000222!6.31e-11!119;CL:0000057!1.38e-09!75;CL:0000066!6.69e-08!254;CL:0000133!1.38e-07!59;CL:0000183!3.84e-07!59;CL:0000393!9.82e-07!60;CL:0000211!9.82e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.21e-17,250;CL:0000222,2.85e-11,121;CL:0000057,9.63e-10,76;CL:0000133,1.52e-07,59;CL:0000066,2.32e-07,253;CL:0002078,7.16e-07,45;CL:0000393,7.67e-07,61;CL:0000211,7.67e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.01e-17!365;UBERON:0000119!8.01e-16!312;UBERON:0000483!1.89e-15!309;UBERON:0000481!1.92e-15!347;UBERON:0000468!4.60e-14!659;UBERON:0002100!1.27e-13!216;UBERON:0000922!3.27e-11!612;UBERON:0000477!3.28e-11!286;UBERON:0005256!5.85e-11!143;UBERON:0003104!3.19e-10!238;UBERON:0009142!3.19e-10!238;UBERON:0003914!4.22e-10!118;UBERON:0002050!5.50e-10!605;UBERON:0005423!5.50e-10!605;UBERON:0000923!1.03e-09!604;UBERON:0005291!1.03e-09!604;UBERON:0006598!1.03e-09!604;UBERON:0002532!1.03e-09!604;UBERON:0000480!1.03e-09!626;UBERON:0000467!1.04e-09!625;UBERON:0000490!1.45e-09!138;UBERON:0000025!1.61e-08!194;UBERON:0004111!1.83e-08!241;UBERON:0002049!2.29e-08!79;UBERON:0007798!2.29e-08!79;UBERON:0000064!2.50e-08!219;UBERON:0000914!6.05e-08!83;UBERON:0002329!6.05e-08!83;UBERON:0003077!6.05e-08!83;UBERON:0003059!6.05e-08!83;UBERON:0007282!6.05e-08!83;UBERON:0009618!6.05e-08!83;UBERON:0007285!6.05e-08!83;UBERON:0004290!1.16e-07!70;UBERON:0004872!1.27e-07!84;UBERON:0000486!1.90e-07!82;UBERON:0009569!2.82e-07!113;UBERON:0004535!7.79e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.94e-15,309;UBERON:0000483,4.54e-15,306;UBERON:0003104,3.17e-13,160;UBERON:0009142,3.17e-13,160;UBERON:0002100,2.96e-12,199;UBERON:0000490,6.94e-12,148;UBERON:0005256,1.48e-10,122;UBERON:0007503,7.34e-10,78;UBERON:0003914,8.27e-10,117;UBERON:0000922,7.24e-09,592;UBERON:0002049,2.63e-08,78;UBERON:0007798,2.63e-08,78;UBERON:0007524,2.76e-08,73;UBERON:0005423,4.13e-08,581;UBERON:0004111,5.89e-08,240;UBERON:0003077,6.05e-08,72;UBERON:0007285,6.05e-08,72;UBERON:0000025,8.35e-08,192;UBERON:0002329,9.31e-08,71;UBERON:0003059,9.31e-08,71;UBERON:0007282,9.31e-08,71;UBERON:0004290,9.31e-08,71;UBERON:0009618,9.31e-08,71;UBERON:0004872,1.46e-07,83;UBERON:0000486,1.78e-07,83;UBERON:0000923,2.39e-07,560;UBERON:0010316,2.39e-07,560;UBERON:0005291,2.39e-07,560;UBERON:0006598,2.39e-07,560;UBERON:0010317,2.39e-07,560;UBERON:0002532,2.39e-07,560;UBERON:0002050,4.11e-07,564;UBERON:0009569,5.60e-07,112 | |||
|phase1_expression=6.35874327446948,5.1384125733836,6.62485699251064,11.0080628188443,6.70441641640932,7.85104671690332,7.59899634504932,0.631719873426831,6.7908263331958,4.66894479352867,9.76921635161399,6.55324116390517,6.06664049925443,6.43585035392242,6.2965501388304,4.70627602516243,6.02694528023977,8.03341099426111,3.90346239032406,7.38726348460727,13.668046313365,8.14982275843028,6.86966369114536,13.4136936571427,9.79232588839462,0.916960868975415,0.656804715599566,0.787107813136792,0,0,0.77408061658038,5.51652734687356,6.6265302131215,5.54631015250181,0.46480320348181,0,0,0,0.401088894940283,0.217010870715852,1.11957737119962,0.647787332037959,0.77272670290256,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.520237390239513,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,1.60464117470104,0,9.75227465255847,4.69490601792545,3.96373941714944,16.9876401620746,4.51204119572301,5.5041677205113,1.5905718941022,4.37971383272372,10.8715039738678,12.6385756553661,11.5941917114926,3.6019245761871,3.64295288292542,2.22470665670658,0.97364218096405,0.522389211897802,1.59549552622638,1.43094374583205,0.571994910780128,0.371457501329565,4.77029777680092,5.16140757063675,15.9684630739493,5.6530794192401,12.1654836500873,14.8563742647636,6.47884396264113,5.68516870172524,2.49036383880697,2.00832367658802,8.45941565929209,3.80136052859256,9.27435818683044,5.51494620518803,8.1014194788176,7.5011771758627,5.61323431565425,4.95490514126618,3.06633274931766,3.79706263827252,8.24407847686833,0,0,6.97750483428055,17.3940183093361,7.34456967654563,1.19168262731897,2.58152958673932,6.02936249737207,5.60677600142307,8.5399196583764,12.0867098724408,4.97937656639626,7.67850830797222,8.17309515567294,7.26515652695671,9.21881479167998,4.68642863667593,4.99456122928513,4.56377457235559,6.27684458317565,9.27732539285743,9.06488488461537,9.41020404905065,4.08308342509786,7.86139630795315,4.75298593408521,1.18800285728205,6.18167323196392,4.55080680969013,10.0606539854273,5.89176398839232,4.25402967564678,1.10825646193673,11.4134181429018,7.04921930337745,4.05642759047811,4.76415169272088,5.91985797773244,5.12537733164562,6.99375273826554,3.30100205692843,4.32820622801443,5.41045134095821,8.37525853492154,2.53164498361899,5.84622030967192,6.56327813034698,7.45604179002625,2.10139873864455,4.9701342952326,6.85114267947954,10.6823173155607,3.86521706326594,2.45471508531751,0.286804595389004,4.39105342066543,3.44577397635862,6.9716365721711,4.97573064073778,5.2987378683882,1.82488679537915,7.8224766164908,16.724264393015,13.8134921352481,4.17931135228781,9.38443326170461,4.73227200159376,5.05754070234305,3.85617647813571,4.52205288202815,4.57546832594053,3.79632990577755,6.47190279168789,4.31687223275761,2.69323009862473,8.85786545549578,21.0362660705169,9.8777762719536,5.88034845542168,7.60530208930985,14.7424082501644,8.86184860022106,1.32438929824395,10.9459710303371,3.08822058537346,6.58501712451753,5.62008766288098,3.51851403440708,4.0738915869753,3.25808305310325,6.23960871167747,4.3299402607582,4.05756417412769,3.40485213283883,3.75352764178792,3.24089858803628,3.61482889245737,3.95102198979638,2.57545848628462,0.738651018262192,0.936017060556951,1.93220510975347,0,1.51183915378974,1.27597587518148,5.0152772713595,4.06887513919547,4.60059214998253,0,1.40877494421162,1.03664057770386,0.432359860250884,0.88369703398466,1.90493682876507,9.54971063895694,8.20522130470329,1.71072446022705,3.90744472272629,2.70308752059526,2.85826432630578,4.59737445815979,5.23152082599936,5.06034172164555,2.97324946242889,17.8828222925941,2.535908257668,11.7012771297343,9.36066932202295,6.43018435655355,7.09245660116391,4.79559922228979,3.0025378668211,4.88359444852299,6.58592269424615,2.60588947434988,5.33087923113819,4.75171123760058,1.80863626235752,0,4.09889263846434,2.43247561282381,2.00902836572851,2.10833939483032,6.9491208092559,14.9320516584348,2.85273810081437,3.04040744001916,8.6300055471161,6.26713371339634,2.35378802386407,0,1.07813787429759,0.513372145118994,2.03275699377971,1.30139853857622,10.8260433788877,9.71594338939223,21.0519788045544,0,0,0,3.0672872929785,7.00238729483548,5.42530047399471,17.8854940916494,20.6977627004708,15.9279439184274,9.48845461440977,5.41702979509894,0,7.24311499047534,9.96338397803155,8.48098175291834,5.99496939829772,14.0976833373173,12.01001983338,0.413536052245775,0,0.640365346820666,4.54691357169389,8.32177197552485,6.35019615992329,3.72161711728165,2.14846762603287,6.17452207752762,5.76626171650654,4.09365799253363,8.20354997832398,0,5.24312958929029,6.21466038595945,5.58464660893902,4.67328986265259,7.08883308605751,4.10922128611516,1.60405176242628,2.76242966807689,3.55924789310281,5.82691737621495,5.76947425821466,3.60959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| |||
|short_description=p@chr12:6879133..6879172,- | |||
}} |
Revision as of 00:06, 11 September 2013
Short description: | p@chr12:6879133..6879172, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:6879133..6879172, - |
Coexpression cluster: | C3321_Mesenchymal_teratocarcinoma_Renal_leiomyoblastoma_Fibroblast_Wilms_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.21e-17 | 250 |
mesodermal cell | 2.85e-11 | 121 |
fibroblast | 9.63e-10 | 76 |
neurectodermal cell | 1.52e-07 | 59 |
epithelial cell | 2.32e-07 | 253 |
meso-epithelial cell | 7.16e-07 | 45 |
electrically responsive cell | 7.67e-07 | 61 |
electrically active cell | 7.67e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.94e-15 | 309 |
epithelium | 4.54e-15 | 306 |
mesenchyme | 3.17e-13 | 160 |
entire embryonic mesenchyme | 3.17e-13 | 160 |
trunk | 2.96e-12 | 199 |
unilaminar epithelium | 6.94e-12 | 148 |
trunk mesenchyme | 1.48e-10 | 122 |
epithelial vesicle | 7.34e-10 | 78 |
epithelial tube | 8.27e-10 | 117 |
embryo | 7.24e-09 | 592 |
vasculature | 2.63e-08 | 78 |
vascular system | 2.63e-08 | 78 |
dense mesenchyme tissue | 2.76e-08 | 73 |
developing anatomical structure | 4.13e-08 | 581 |
anatomical conduit | 5.89e-08 | 240 |
paraxial mesoderm | 6.05e-08 | 72 |
presumptive paraxial mesoderm | 6.05e-08 | 72 |
tube | 8.35e-08 | 192 |
somite | 9.31e-08 | 71 |
presomitic mesoderm | 9.31e-08 | 71 |
presumptive segmental plate | 9.31e-08 | 71 |
dermomyotome | 9.31e-08 | 71 |
trunk paraxial mesoderm | 9.31e-08 | 71 |
splanchnic layer of lateral plate mesoderm | 1.46e-07 | 83 |
multilaminar epithelium | 1.78e-07 | 83 |
germ layer | 2.39e-07 | 560 |
germ layer / neural crest | 2.39e-07 | 560 |
embryonic tissue | 2.39e-07 | 560 |
presumptive structure | 2.39e-07 | 560 |
germ layer / neural crest derived structure | 2.39e-07 | 560 |
epiblast (generic) | 2.39e-07 | 560 |
embryonic structure | 4.11e-07 | 564 |
subdivision of trunk | 5.60e-07 | 112 |
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