FFCP PHASE1:Hg19::chr12:70132632..70132687,+: Difference between revisions
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{{FFCP | 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9427,7.87941794897625,7.17772629306586,8.86966605079948,13.072411982758,10.2817407285575,10.1717683301165,6.00100575368446,13.4263196303111,34.802531990887,9.55430132876678,4.40030541129469,2.40376993627955,1.6837474438296,20.1895837165842,28.1224952394663,9.2209884291218,27.6653949483124,6.5744718398559,12.2706911391632,22.0263034055821,15.5807291740894,4.63202170741458,23.6826773545004,15.9020231351293,21.4134582480715,13.0085679302866,18.4493893383322,14.5080743527103,14.281417940337,36.2237102717535,33.7108334292142,18.6010776438708,38.6014330443792,12.4491742561637,13.5175099814546,48.3904762491256,9.3994076051817,11.3093233475789,8.61074898304078,9.08025525706937,19.1470188261914,51.4756588407556,36.0804810819124,14.8357470712236,1.07824811396682,28.6224014177731,8.40914214078507,6.78930119816101,22.7455164508801,35.6935001065926,24.5803763908227,5.72407831176153,73.8934550661744,86.4616408148307,2.46873160583479,1.531227386766,39.8221195598049,55.2616647669781,48.528693153374,48.8176946892997,40.5835430916966,30.2908765793274,36.1705446215346,92.8001231684504,11.0906921906159,22.4142474360707,17.2422882610378,14.5562339349426,5.33934933654034,27.614397042404,0.596748666348824,9.92776334210196,14.9261750840605,18.7563362695942,89.8339962071279,18.1786828436207,62.099556211159,41.6031521249311,50.7700764099001,44.8510348407569,35.0689430372305,40.4761358673482,14.2547019382867,9.92422356778589,63.1377767251038,21.7196126987312,40.1776376908715,33.6283722218824,67.3731820702661,78.0881316334951,14.8132958171607,21.3182876978192,10.6322565851199,78.9128599861016,31.0447491216648,29.0756848574562,29.1426272957221,12.9513603203348,37.2363948100924,34.7537482509098,36.5263488203798,45.9925769295664,30.0983563368842,74.7644652087825,16.1173883967381,24.7594236034107,238.533549599139,0,4.14432328326074,6.4873021295701,7.60385627995501,20.220685864553,17.3948041073931,16.5314005232766,38.1048345171836,26.3472898825658,35.3635279657325,25.7995513523907,30.3128220172017,46.7195112008557,37.9164746694858,18.7754362784489,17.1446887449933,11.598144313382,19.9141507154247,135.684888808021,22.4814375932346,19.2650547059661,58.1672322500644,34.9610843250465,44.835964539302,25.4674721756217,28.8498619865224,76.6617193069282,7.10930133086326,432.702140478585,66.7448788190814,55.250630460838,27.8952780205044,5.26774055532232,18.8907675139506,17.4036297528658,22.9864658627337,29.2828459313278,35.2894871715692,15.5668251376986,18.9887460944094,26.6062984374634,45.1519686927072,21.7724755826595,31.2760854878208,43.1987183436974,29.096476228347,2.23197010900051,1.84870251452567,2.16313281061895,61.6953817443536,12.0192129160065,20.7785541658757,45.1810515756979,45.4269588951453,61.2020030902067,26.5749991649918,28.5685692282763,34.2994086599908,79.6002661880428,40.8560333654486,17.4851865158804,25.2348297351565,23.4457742704702,37.0586044346272,20.4079989896716,17.2483798933827,23.4455939191534,10.2326871511572,14.7160319466671,17.1747735187198,24.6724386550807,20.6249421058528,28.1655309393972,24.9741989353854,1.9307228228694,14.8211583475868,16.4248659682418,8.92362542534925,17.089639489261,27.296027741606,11.4726062346885,18.5929725535875|short_description=p1@RAB3IP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=117177 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16508 | |||
|TSSclassifier=S | |||
|UniProt=Q96QF0 | |||
|association_with_transcript=0bp_to_ENST00000325555,ENST00000378815,ENST00000417413,ENST00000483530_5end | |||
|description=CAGE_peak_1_at_RAB3IP_5end | |||
|id=chr12:70132632..70132687,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.56e-07;82 | |||
|ontology_enrichment_disease=DOID:305!4.40e-17!106;DOID:0050687!1.45e-16!143;DOID:162!8.84e-14!235;DOID:14566!7.41e-13!239;DOID:299!2.30e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.51e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.39e-17,106;DOID:0050687,1.40e-16,143;DOID:162,8.61e-14,235;DOID:14566,7.23e-13,239;DOID:299,2.30e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-22!115;UBERON:0001049!1.94e-22!57;UBERON:0005068!1.94e-22!57;UBERON:0006241!1.94e-22!57;UBERON:0007135!1.94e-22!57;UBERON:0005743!6.81e-20!86;UBERON:0000073!5.15e-19!94;UBERON:0001016!5.15e-19!94;UBERON:0001017!8.01e-19!82;UBERON:0002780!9.17e-19!41;UBERON:0001890!9.17e-19!41;UBERON:0006240!9.17e-19!41;UBERON:0003080!1.16e-18!42;UBERON:0002616!7.35e-18!59;UBERON:0002346!5.85e-17!90;UBERON:0000955!1.40e-16!69;UBERON:0006238!1.40e-16!69;UBERON:0003075!2.21e-16!86;UBERON:0007284!2.21e-16!86;UBERON:0002020!2.71e-15!34;UBERON:0003528!2.71e-15!34;UBERON:0001893!3.63e-15!34;UBERON:0002791!1.07e-14!33;UBERON:0001869!3.68e-14!32;UBERON:0003056!9.52e-14!61;UBERON:0002619!8.84e-12!22;UBERON:0000956!8.24e-11!25;UBERON:0000203!8.24e-11!25;UBERON:0001950!1.17e-10!20;UBERON:0000153!2.24e-08!129;UBERON:0007811!2.24e-08!129;UBERON:0000924!3.58e-08!173;UBERON:0006601!3.58e-08!173;UBERON:0004121!1.06e-07!169;UBERON:0000033!1.35e-07!123 | |||
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| |||
|short_description=p1@RAB3IP | |||
}} |
Revision as of 00:14, 11 September 2013
Short description: | p1@RAB3IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAB3IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325555, ENST00000378815, ENST00000417413, ENST00000483530_5end |
EntrezGene: | RAB3IP |
HGNC: | 16508 |
UniProt: | Q96QF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.65e-22 | 56 |
neural rod | 1.65e-22 | 56 |
future spinal cord | 1.65e-22 | 56 |
neural keel | 1.65e-22 | 56 |
adult organism | 2.72e-22 | 114 |
regional part of nervous system | 4.39e-21 | 53 |
regional part of brain | 4.39e-21 | 53 |
central nervous system | 8.66e-19 | 81 |
regional part of forebrain | 9.15e-19 | 41 |
forebrain | 9.15e-19 | 41 |
anterior neural tube | 9.15e-19 | 41 |
future forebrain | 9.15e-19 | 41 |
nervous system | 6.60e-18 | 89 |
brain | 1.49e-16 | 68 |
future brain | 1.49e-16 | 68 |
neurectoderm | 1.56e-16 | 86 |
neural plate | 5.80e-16 | 82 |
presumptive neural plate | 5.80e-16 | 82 |
brain grey matter | 2.70e-15 | 34 |
gray matter | 2.70e-15 | 34 |
telencephalon | 3.62e-15 | 34 |
pre-chordal neural plate | 2.74e-14 | 61 |
regional part of telencephalon | 3.43e-14 | 32 |
cerebral hemisphere | 3.68e-14 | 32 |
ecto-epithelium | 9.66e-13 | 104 |
regional part of cerebral cortex | 8.83e-12 | 22 |
organ system subdivision | 1.14e-11 | 223 |
cerebral cortex | 8.23e-11 | 25 |
pallium | 8.23e-11 | 25 |
neocortex | 1.17e-10 | 20 |
ectoderm-derived structure | 2.92e-07 | 171 |
ectoderm | 2.92e-07 | 171 |
presumptive ectoderm | 2.92e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.39e-17 | 106 |
cell type cancer | 1.40e-16 | 143 |
cancer | 8.61e-14 | 235 |
disease of cellular proliferation | 7.23e-13 | 239 |
adenocarcinoma | 2.30e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.