FFCP PHASE1:Hg19::chr13:28552822..28552831,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1705|description=CAGE_peak_at_chr13:28552822..28552831,-|id=chr13:28552822..28552831,-|ontology_enrichment_celltype=CL:0002322!2.46e-17!5;CL:0002563!2.05e-10!4;CL:0000148!5.94e-09!10;CL:0000541!5.94e-09!10;CL:0000080!3.36e-07!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.43e-33!27;UBERON:0000059!2.93e-31!11;UBERON:0005409!8.48e-31!35;UBERON:0001155!1.12e-26!9;UBERON:0004907!5.58e-18!5;UBERON:0001154!7.46e-11!1;UBERON:0001153!7.46e-11!1;UBERON:0001052!1.05e-10!4;UBERON:0004921!1.84e-10!129;UBERON:0004185!1.84e-10!129;UBERON:0001242!2.05e-10!4;UBERON:0001262!2.05e-10!4;UBERON:0004786!2.05e-10!4;UBERON:0004808!2.05e-10!4;UBERON:0001277!2.05e-10!4;UBERON:0001007!7.82e-10!155;UBERON:0001555!7.82e-10!155;UBERON:0007026!7.82e-10!155;UBERON:0004119!7.83e-09!169;UBERON:0000925!7.83e-09!169;UBERON:0006595!7.83e-09!169;UBERON:0003350!1.66e-08!5;UBERON:0001046!2.64e-08!19|ontology_enrichment_uberon_v019=UBERON:0000160;6.20e-67;17!UBERON:0005409;1.81e-52;22!UBERON:0002108;3.21e-45;4!UBERON:0000059;3.24e-36;11!UBERON:0004921;4.40e-30;33!UBERON:0001155;3.30e-25;9!UBERON:0001555;8.55e-12;54!UBERON:0002114;1.35e-09;2!UBERON:0001007;2.05e-09;81!UBERON:0001052;1.31e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.62e-67,17;UBERON:0005409,1.75e-46,25;UBERON:0002108,3.47e-45,4;UBERON:0000059,2.83e-36,11;UBERON:0001155,2.92e-25,9;UBERON:0004921,2.56e-13,118;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0002114,1.41e-09,2;UBERON:0001052,1.31e-07,4;UBERON:0011216,6.23e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,1.99052386215701,2.74218449960351,1.83309043480088,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72653191953094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93914611890846,4.5897507705831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:28552822..28552831,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1705 | |||
|description=CAGE_peak_at_chr13:28552822..28552831,- | |||
|id=chr13:28552822..28552831,- | |||
|ontology_enrichment_celltype=CL:0002322!2.46e-17!5;CL:0002563!2.05e-10!4;CL:0000148!5.94e-09!10;CL:0000541!5.94e-09!10;CL:0000080!3.36e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.43e-33!27;UBERON:0000059!2.93e-31!11;UBERON:0005409!8.48e-31!35;UBERON:0001155!1.12e-26!9;UBERON:0004907!5.58e-18!5;UBERON:0001154!7.46e-11!1;UBERON:0001153!7.46e-11!1;UBERON:0001052!1.05e-10!4;UBERON:0004921!1.84e-10!129;UBERON:0004185!1.84e-10!129;UBERON:0001242!2.05e-10!4;UBERON:0001262!2.05e-10!4;UBERON:0004786!2.05e-10!4;UBERON:0004808!2.05e-10!4;UBERON:0001277!2.05e-10!4;UBERON:0001007!7.82e-10!155;UBERON:0001555!7.82e-10!155;UBERON:0007026!7.82e-10!155;UBERON:0004119!7.83e-09!169;UBERON:0000925!7.83e-09!169;UBERON:0006595!7.83e-09!169;UBERON:0003350!1.66e-08!5;UBERON:0001046!2.64e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.20e-67;17!UBERON:0005409;1.81e-52;22!UBERON:0002108;3.21e-45;4!UBERON:0000059;3.24e-36;11!UBERON:0004921;4.40e-30;33!UBERON:0001155;3.30e-25;9!UBERON:0001555;8.55e-12;54!UBERON:0002114;1.35e-09;2!UBERON:0001007;2.05e-09;81!UBERON:0001052;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.62e-67,17;UBERON:0005409,1.75e-46,25;UBERON:0002108,3.47e-45,4;UBERON:0000059,2.83e-36,11;UBERON:0001155,2.92e-25,9;UBERON:0004921,2.56e-13,118;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0002114,1.41e-09,2;UBERON:0001052,1.31e-07,4;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,1.99052386215701,2.74218449960351,1.83309043480088,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72653191953094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93914611890846,4.5897507705831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:28552822..28552831,- | |||
}} |
Revision as of 01:54, 11 September 2013
Short description: | p@chr13:28552822..28552831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28552822..28552831, - |
Coexpression cluster: | C1705_rectal_small_colon_temporal_duodenum_hepatoblastoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 5.62e-67 | 17 |
gastrointestinal system | 1.75e-46 | 25 |
small intestine | 3.47e-45 | 4 |
large intestine | 2.83e-36 | 11 |
colon | 2.92e-25 | 9 |
subdivision of digestive tract | 2.56e-13 | 118 |
digestive system | 7.53e-11 | 145 |
digestive tract | 7.53e-11 | 145 |
primitive gut | 7.53e-11 | 145 |
endoderm-derived structure | 7.84e-10 | 160 |
endoderm | 7.84e-10 | 160 |
presumptive endoderm | 7.84e-10 | 160 |
duodenum | 1.41e-09 | 2 |
rectum | 1.31e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.