FFCP PHASE1:Hg19::chr14:27067258..27067276,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |||
|TSSclassifier=W | |||
|UniProt=P51513,D3DS81 | |||
|association_with_transcript=-298bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_3_at_NOVA1_5end | |||
|id=chr14:27067258..27067276,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.52e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;8.91e-24;53!UBERON:0002616;8.91e-24;53!UBERON:0002780;1.36e-23;41!UBERON:0001890;1.36e-23;41!UBERON:0003528;1.96e-23;34!UBERON:0002020;1.96e-23;34!UBERON:0001893;2.64e-23;34!UBERON:0002791;4.03e-23;32!UBERON:0001869;4.34e-23;32!UBERON:0002619;2.80e-20;22!UBERON:0000956;1.21e-19;25!UBERON:0000203;1.21e-19;25!UBERON:0001950;1.04e-18;20!UBERON:0001017;2.80e-18;75!UBERON:0000955;6.12e-16;68!UBERON:0001016;2.17e-15;83!UBERON:0007023;1.60e-14;114!UBERON:0004732;5.93e-10;13!UBERON:0000125;1.81e-09;9!UBERON:0002308;1.81e-09;9!UBERON:0011216;2.07e-09;132!UBERON:0002420;3.58e-09;9!UBERON:0007245;3.58e-09;9!UBERON:0010009;3.58e-09;9!UBERON:0010011;3.58e-09;9!UBERON:0000454;3.58e-09;9!UBERON:0004733;5.04e-09;12!UBERON:0002028;5.04e-09;12!UBERON:0009663;1.52e-07;7!UBERON:0010314;3.43e-07;132!UBERON:0001894;4.60e-07;7!UBERON:0002298;4.76e-07;6!UBERON:0001871;6.00e-07;6!UBERON:0000200;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-53,114;UBERON:0001049,3.57e-44,56;UBERON:0005068,3.57e-44,56;UBERON:0006241,3.57e-44,56;UBERON:0007135,3.57e-44,56;UBERON:0003075,4.33e-43,82;UBERON:0007284,4.33e-43,82;UBERON:0002346,2.05e-42,86;UBERON:0001016,2.82e-42,89;UBERON:0001017,4.21e-42,81;UBERON:0000073,4.05e-41,53;UBERON:0002616,4.05e-41,53;UBERON:0010314,1.16e-37,132;UBERON:0000955,5.96e-36,68;UBERON:0006238,5.96e-36,68;UBERON:0010371,4.23e-33,104;UBERON:0002780,4.52e-33,41;UBERON:0001890,4.52e-33,41;UBERON:0003080,4.52e-33,41;UBERON:0006240,4.52e-33,41;UBERON:0004121,4.42e-32,171;UBERON:0000924,4.42e-32,171;UBERON:0006601,4.42e-32,171;UBERON:0011216,1.43e-29,223;UBERON:0003056,4.19e-29,61;UBERON:0003528,1.41e-27,34;UBERON:0002020,1.41e-27,34;UBERON:0001893,2.15e-27,34;UBERON:0002791,1.26e-25,32;UBERON:0001869,1.33e-25,32;UBERON:0002619,2.87e-20,22;UBERON:0000956,1.32e-19,25;UBERON:0000203,1.32e-19,25;UBERON:0001950,1.06e-18,20;UBERON:0000483,2.27e-14,306;UBERON:0000119,7.42e-14,309;UBERON:0004111,1.96e-12,240;UBERON:0000025,4.02e-12,192;UBERON:0003076,5.99e-12,15;UBERON:0003057,5.99e-12,15;UBERON:0000923,6.55e-12,560;UBERON:0010316,6.55e-12,560;UBERON:0005291,6.55e-12,560;UBERON:0006598,6.55e-12,560;UBERON:0010317,6.55e-12,560;UBERON:0002532,6.55e-12,560;UBERON:0002050,6.59e-12,564;UBERON:0000922,7.93e-12,592;UBERON:0005423,3.27e-11,581;UBERON:0004732,4.63e-10,13;UBERON:0000125,1.87e-09,9;UBERON:0002308,1.87e-09,9;UBERON:0002420,3.72e-09,9;UBERON:0007245,3.72e-09,9;UBERON:0010009,3.72e-09,9;UBERON:0010011,3.72e-09,9;UBERON:0000454,3.72e-09,9;UBERON:0004733,3.94e-09,12;UBERON:0002028,3.94e-09,12;UBERON:0007277,3.94e-09,12;UBERON:0009663,1.56e-07,7;UBERON:0002298,4.78e-07,6;UBERON:0001894,4.80e-07,7;UBERON:0006222,4.80e-07,7;UBERON:0001871,6.19e-07,6;UBERON:0000200,8.76e-07,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,5.05375898741465,21.4172215123868,0.491467873003018,0,0,0,2.84662611808107,3.64537113300707,0.672325146451775,0,0,0.487932798790507,2.46242116153576,0.408001382488506,1.88072832886853,2.28988789704845,2.46373965131192,0.753255837568817,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.255725123687061,0,0,0.579386075843295,1.5905718941022,0,1.89069634328136,1.33037638477538,1.93236528524877,5.43563163315507,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,1.69592382577203,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.446498641420399,0.673588117878509,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.379891534993739,1.32409180813219,2.0078563452417,1.06400514659507,2.24271040056923,0,0,9.95875313279252,2.96363478553314,9.15386657435369,1.05950199351452,0.576175924479999,7.73260725051529,4.99456122928513,4.56377457235559,2.39117888882882,1.996386476944,0.971237666208789,1.26405726032024,1.42907919878425,0.61417158655884,4.85631171526098,1.18800285728205,0.494533858557114,6.37112953356618,0,0.505008341862199,2.00189631795143,1.10825646193673,0.438977620880838,0,0,1.36118619792025,0.179389635688862,0,0.847727604638247,0,0,0,0.18611685633159,0,0,0.252433774244115,0.460249493211497,0.646584227275248,0,0.10075209822764,0.169560592310488,0,0,0,1.46368447355514,0.662648841607426,1.16193942869518,2.69518743039963,0.504641701751257,0.36497735907583,3.12899064659632,2.57296375277154,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,0,4.41026134156626,1.26755034821831,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,2.93227474779292,2.07986957055916,1.44331342025273,2.08674728955138,1.05667824812239,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0,4.86125178437702,0,0,0.325736184293735,2.84313558994037,0,0.301439377059586,0,0.699810938274399,0,0,0,1.4377491329495,0,0,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,43.9583699904862,20.8223766172195,7.73288812777695,4.85797169469611,3.18969375826582,0,0,0,3.18997878469764,0.500170521059677,1.62759014219841,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,1.73767228936166,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,1.06537035187876,2.7101961484557,1.03850885836724,0.464841513839837,0.120859449591622,0,0,0.918515585316854,1.0925470080403,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.650756789328606,1.13345112812495,0,0,0,0,0,1.93341436584244,7.54838223861757,6.60065801322357,0.275673144969061,2.57808587683857,5.51063436874068,2.47157219506693,0.623224249527161,0,0,0,0.2023155617111,0.929691098594572,0.31481234683064,0.6970372701606,1.54016790088044,0,0,0.74129687641568,0.286249773483982,0,0,0.190630193923825,1.02359116524534,1.71175595213568,0.636406495851874,0,1.43897966066652,2.19629623788844,2.00281083987667,0.404364963146632,0,1.26377536871694,9.75267478179181,0.487426979262569,0,0.9554993798559,1.69686518344455,1.13008116620243,0,0,0.876901770507525,10.9967351510671,10.4943160327461,0,0,0.281695602532241,0.143411352204052,0,0,1.06428319221179,0.422215270595328,0.329294892959902,1.51789269506286,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,76.0359085658053,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.4243709244348,0.242721043499027,0,0,0,0,0,16.9005100120271,26.3051808687659,0.890469640183247,0,5.91151142758382,3.78571177677032,5.24939439509181,0,6.85200172764437,3.93871377475422,0,0,0.358042349351218,0,7.99011585659162,0,0,31.9879806211422,19.2029963195032,7.98455192004777,0,0.349839999984783,72.4999575434794,0.227586896570999,0.762760950878299,0.236387681767936,1.03423011972439,0.291604613383254,3.99337488346572,23.0292760311598,17.4864836006842,53.4036077109791,54.5155751460937,29.5547618953547,21.0609981267814,0,0,18.0063604898885,0,0,0.0897576444097721,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,7.3572137512311,2.98578579323551,6.45740220874376,3.66618086960175,1.18608451472249,1.11207545051853,1.04421949505455,29.0498883146718,1.60515529459758,14.9929245264217,0,0,0,14.2050385025781,3.62972148145992,14.6914925582635,2.46427660551103,0.751617097072463,0.103688191397247,0,0,0,0,1.42304773014896,0,0,0,0,6.29016005671309,1.20390222730132,0,0,0,4.65547279144413,1.94163478721301,2.93774963014692,0,0,25.5142507702191,0.195551382734803,0,3.84215390530835,0,0,0,25.2244646857088,0,1.86378803348149,0,0,0,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| |||
|short_description=p3@NOVA1 | |||
}} |
Revision as of 04:14, 11 September 2013
Short description: | p3@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NOVA1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | -298bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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