FFCP PHASE1:Hg19::chr14:34689000..34689010,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:34689000..34689010,-|id=chr14:34689000..34689010,-|ontology_enrichment_celltype=CL:0002159!3.13e-20!13;CL:0002541!8.19e-18!3;CL:0000362!2.89e-11!8;CL:0000312!2.17e-10!5;CL:0000066!4.59e-10!254;CL:0002076!8.60e-09!43;CL:0000240!9.81e-09!6;CL:0000311!9.81e-09!6;CL:0000079!9.81e-09!6;CL:0000237!9.81e-09!6;CL:0000036!9.81e-09!6;CL:0000357!9.81e-09!6;CL:0000114!9.81e-09!6;CL:0002166!1.13e-08!3;CL:0002621!1.52e-08!3;CL:0000349!1.90e-08!3;CL:0002577!1.90e-08!3;CL:0000239!2.55e-08!3;CL:1000615!2.55e-08!3;CL:0002306!2.55e-08!3;CL:0002077!2.05e-07!33|ontology_enrichment_celltype_v019=CL:0002159;8.27e-19;14!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000362;1.58e-13;9!CL:0002541;7.07e-11;3!CL:0002166;9.90e-11;3!CL:0002577;9.90e-11;3!CL:0002621;9.90e-11;3!CL:0002077;1.48e-07;34!CL:0000349;5.92e-07;19!CL:0000312;6.04e-07;5!CL:0000622;6.04e-07;5|ontology_enrichment_celltype_v019_2=CL:0002159,8.79e-19,14;CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0000362,1.91e-13,9;CL:0002541,6.73e-11,3;CL:0002166,8.17e-11,3;CL:0002577,8.99e-11,3;CL:0002621,9.90e-11,3;CL:0002077,3.67e-08,34;CL:0000349,5.66e-07,19;CL:0000622,6.39e-07,5;CL:0000312,6.77e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4468!5.53e-12!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003124!1.88e-28!7;UBERON:0005631!7.93e-19!14;UBERON:0000158!7.93e-19!14;UBERON:0000476!8.19e-18!3;UBERON:0000920!8.19e-18!3;UBERON:0001987!4.47e-13!4;UBERON:0004340!4.47e-13!4;UBERON:0000478!1.34e-10!24;UBERON:0004175!8.73e-10!25;UBERON:0000995!7.70e-09!21;UBERON:0001949!1.52e-08!3;UBERON:0005795!2.07e-08!22;UBERON:0003975!2.07e-08!22;UBERON:0006853!2.55e-08!3;UBERON:0007685!2.55e-08!3;UBERON:0004134!2.55e-08!3|ontology_enrichment_uberon_v019=UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0003124;7.07e-11;3!UBERON:0000920;7.07e-11;3!UBERON:0001949;9.90e-11;3!UBERON:0010371;3.56e-09;31!UBERON:0001003;1.65e-08;15!UBERON:0007376;1.65e-08;15!UBERON:0001987;2.26e-08;4!UBERON:0001708;2.26e-08;4!UBERON:0008895;2.26e-08;4!UBERON:0011159;6.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.90e-17,7;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2;UBERON:0000920,6.73e-11,3;UBERON:0001949,9.90e-11,3;UBERON:0005631,3.88e-09,14;UBERON:0000158,3.88e-09,14;UBERON:0001003,1.85e-08,15;UBERON:0007376,1.85e-08,15;UBERON:0007383,1.85e-08,15;UBERON:0001708,1.96e-08,4;UBERON:0008895,1.96e-08,4;UBERON:0001987,2.11e-08,4;UBERON:0004340,2.11e-08,4;UBERON:0011159,5.38e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,3.57315594984836,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.366390373607449,3.73124343213044,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.69647365264322,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:34689000..34689010,- | |||
|id=chr14:34689000..34689010,- | |||
|ontology_enrichment_celltype=CL:0002159!3.13e-20!13;CL:0002541!8.19e-18!3;CL:0000362!2.89e-11!8;CL:0000312!2.17e-10!5;CL:0000066!4.59e-10!254;CL:0002076!8.60e-09!43;CL:0000240!9.81e-09!6;CL:0000311!9.81e-09!6;CL:0000079!9.81e-09!6;CL:0000237!9.81e-09!6;CL:0000036!9.81e-09!6;CL:0000357!9.81e-09!6;CL:0000114!9.81e-09!6;CL:0002166!1.13e-08!3;CL:0002621!1.52e-08!3;CL:0000349!1.90e-08!3;CL:0002577!1.90e-08!3;CL:0000239!2.55e-08!3;CL:1000615!2.55e-08!3;CL:0002306!2.55e-08!3;CL:0002077!2.05e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002159;8.27e-19;14!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000362;1.58e-13;9!CL:0002541;7.07e-11;3!CL:0002166;9.90e-11;3!CL:0002577;9.90e-11;3!CL:0002621;9.90e-11;3!CL:0002077;1.48e-07;34!CL:0000349;5.92e-07;19!CL:0000312;6.04e-07;5!CL:0000622;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,8.79e-19,14;CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0000362,1.91e-13,9;CL:0002541,6.73e-11,3;CL:0002166,8.17e-11,3;CL:0002577,8.99e-11,3;CL:0002621,9.90e-11,3;CL:0002077,3.67e-08,34;CL:0000349,5.66e-07,19;CL:0000622,6.39e-07,5;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!5.53e-12!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.88e-28!7;UBERON:0005631!7.93e-19!14;UBERON:0000158!7.93e-19!14;UBERON:0000476!8.19e-18!3;UBERON:0000920!8.19e-18!3;UBERON:0001987!4.47e-13!4;UBERON:0004340!4.47e-13!4;UBERON:0000478!1.34e-10!24;UBERON:0004175!8.73e-10!25;UBERON:0000995!7.70e-09!21;UBERON:0001949!1.52e-08!3;UBERON:0005795!2.07e-08!22;UBERON:0003975!2.07e-08!22;UBERON:0006853!2.55e-08!3;UBERON:0007685!2.55e-08!3;UBERON:0004134!2.55e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0003124;7.07e-11;3!UBERON:0000920;7.07e-11;3!UBERON:0001949;9.90e-11;3!UBERON:0010371;3.56e-09;31!UBERON:0001003;1.65e-08;15!UBERON:0007376;1.65e-08;15!UBERON:0001987;2.26e-08;4!UBERON:0001708;2.26e-08;4!UBERON:0008895;2.26e-08;4!UBERON:0011159;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.90e-17,7;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2;UBERON:0000920,6.73e-11,3;UBERON:0001949,9.90e-11,3;UBERON:0005631,3.88e-09,14;UBERON:0000158,3.88e-09,14;UBERON:0001003,1.85e-08,15;UBERON:0007376,1.85e-08,15;UBERON:0007383,1.85e-08,15;UBERON:0001708,1.96e-08,4;UBERON:0008895,1.96e-08,4;UBERON:0001987,2.11e-08,4;UBERON:0004340,2.11e-08,4;UBERON:0011159,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,3.57315594984836,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.366390373607449,3.73124343213044,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.69647365264322,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:34689000..34689010,- | |||
}} |
Revision as of 04:21, 11 September 2013
Short description: | p@chr14:34689000..34689010, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:34689000..34689010, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 8.79e-19 | 14 |
sebum secreting cell | 2.37e-15 | 2 |
epithelial cell of sweat gland | 2.37e-15 | 2 |
epithelial cell of skin gland | 2.37e-15 | 2 |
acinar cell of sebaceous gland | 2.37e-15 | 2 |
epidermal cell | 1.91e-13 | 9 |
chorionic membrane mesenchymal stem cell | 6.73e-11 | 3 |
epithelial cell of Malassez | 8.17e-11 | 3 |
placental epithelial cell | 8.99e-11 | 3 |
gingival epithelial cell | 9.90e-11 | 3 |
ecto-epithelial cell | 3.67e-08 | 34 |
extraembryonic cell | 5.66e-07 | 19 |
acinar cell | 6.39e-07 | 5 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.90e-17 | 7 |
skin gland | 2.37e-15 | 2 |
epidermis gland | 2.37e-15 | 2 |
gland of integumental system | 2.37e-15 | 2 |
sebaceous gland | 2.37e-15 | 2 |
skin sebaceous gland | 2.37e-15 | 2 |
sweat gland | 2.37e-15 | 2 |
sweat gland placode | 2.37e-15 | 2 |
sebaceous gland placode | 2.37e-15 | 2 |
egg chorion | 6.73e-11 | 3 |
gingival epithelium | 9.90e-11 | 3 |
extraembryonic membrane | 3.88e-09 | 14 |
membranous layer | 3.88e-09 | 14 |
skin epidermis | 1.85e-08 | 15 |
outer epithelium | 1.85e-08 | 15 |
enveloping layer of ectoderm | 1.85e-08 | 15 |
jaw skeleton | 1.96e-08 | 4 |
splanchnocranium | 1.96e-08 | 4 |
placenta | 2.11e-08 | 4 |
allantois | 2.11e-08 | 4 |
primary subdivision of cranial skeletal system | 5.38e-07 | 5 |
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