FFCP PHASE1:Hg19::chr15:75871917..75871951,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5780|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9661|TSSclassifier=S|UniProt=P43378,F5H2Q4|association_with_transcript=-287bp_to_ENST00000306726,ENST00000544966_5end|description=CAGE_peak_9_at_PTPN9_5end|id=chr15:75871917..75871951,-|ontology_enrichment_celltype=CL:0000945!4.13e-13!24;CL:0000826!4.13e-13!24;CL:0000542!6.76e-11!53;CL:0000051!6.76e-11!53;CL:0000838!2.76e-10!52;CL:0002087!2.92e-09!119;CL:0002031!1.05e-07!124;CL:0000988!2.55e-07!182;CL:0000738!4.22e-07!140|ontology_enrichment_celltype_v019=CL:0000945;8.41e-23;24!CL:0000542;2.24e-11;53!CL:0000236;2.69e-07;13!CL:0000785;4.08e-07;1!CL:0000819;4.08e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,3.74e-23,24;CL:0000826,3.74e-23,24;CL:0000542,2.58e-16,53;CL:0000051,2.58e-16,53;CL:0000838,4.44e-14,52;CL:0002087,1.07e-09,115;CL:0002031,4.18e-09,120;CL:0000738,7.38e-09,136;CL:0002032,4.90e-08,161;CL:0000837,4.90e-08,161;CL:0000988,5.94e-08,177;CL:0000037,1.49e-07,168;CL:0000819,3.02e-07,1;CL:0000236,7.41e-07,14|ontology_enrichment_development_v019=CL:0000051;2.24e-11;53!UBERON:0001045;1.68e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;7.94e-10;10!DOID:630;1.68e-07;1!DOID:0050177;1.68e-07;1!DOID:12603;1.68e-07;1!DOID:0050427;1.68e-07;1!DOID:0060060;4.08e-07;1!DOID:0060073;4.08e-07;1!DOID:0060061;4.08e-07;1!DOID:8675;4.08e-07;1!DOID:8691;4.08e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,7.01e-10,10;DOID:630,1.44e-07,1;DOID:0050177,1.44e-07,1;DOID:0050427,1.44e-07,1;DOID:12603,2.09e-07,1;DOID:0060073,3.02e-07,1;DOID:8675,3.02e-07,1;DOID:0060060,3.85e-07,1;DOID:0060061,3.85e-07,1;DOID:8691,3.85e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001154;1.68e-07;1!UBERON:0001153;1.68e-07;1!UBERON:0009854;1.68e-07;1!UBERON:0002372;4.08e-07;1!UBERON:0001961;4.08e-07;1!UBERON:0001744;4.08e-07;1!UBERON:0001042;4.08e-07;1!UBERON:0001735;4.08e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.36e-07,1;UBERON:0001153,1.36e-07,1;UBERON:0001045,1.36e-07,1;UBERON:0002372,5.50e-07,1;UBERON:0001961,5.50e-07,1;UBERON:0001744,5.50e-07,1;UBERON:0001735,5.50e-07,1|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0.572471974262113,0.136874425072884,0,1.60468152070698,1.80621296789881,1.8890587515283,0,0,0.154816123316076,0,0,0,2.24654881682875,0.426507697462265,0,0,0.601633342410425,0,0.223915474239924,1.29557466407592,0,0.145398238779565,0,0.485168122375632,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.75374599577023,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,0,0,0.569212969109448,1.17447437874188,1.52909291250092,0,0,0.526768169550154,0,0,0,0.334372990781356,0,0,0,1.22551502573691,0,0.664601683750863,0,4.61128751012431,3.12142434143708,0.657751618414705,0,0.869409257205157,0.14828656316206,0,0,0.793165398882963,0,0,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,1.06976078313403,0.579297615531196,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0.97364218096405,1.0447784237956,2.12732736830184,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0.206105058476878,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.580969714347592,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0,0,0.179117045405697,0.290633938513962,0,0,1.05658120815871,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.358121926479791,0,0.591092280605782,0.215627574859517,0.513372145118994,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,3.32870879020994,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.410635780069046,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0.510281115829547,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.09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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9661 | |||
|TSSclassifier=S | |||
|UniProt=P43378,F5H2Q4 | |||
|association_with_transcript=-287bp_to_ENST00000306726,ENST00000544966_5end | |||
|description=CAGE_peak_9_at_PTPN9_5end | |||
|id=chr15:75871917..75871951,- | |||
|ontology_enrichment_celltype=CL:0000945!4.13e-13!24;CL:0000826!4.13e-13!24;CL:0000542!6.76e-11!53;CL:0000051!6.76e-11!53;CL:0000838!2.76e-10!52;CL:0002087!2.92e-09!119;CL:0002031!1.05e-07!124;CL:0000988!2.55e-07!182;CL:0000738!4.22e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.41e-23;24!CL:0000542;2.24e-11;53!CL:0000236;2.69e-07;13!CL:0000785;4.08e-07;1!CL:0000819;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.74e-23,24;CL:0000826,3.74e-23,24;CL:0000542,2.58e-16,53;CL:0000051,2.58e-16,53;CL:0000838,4.44e-14,52;CL:0002087,1.07e-09,115;CL:0002031,4.18e-09,120;CL:0000738,7.38e-09,136;CL:0002032,4.90e-08,161;CL:0000837,4.90e-08,161;CL:0000988,5.94e-08,177;CL:0000037,1.49e-07,168;CL:0000819,3.02e-07,1;CL:0000236,7.41e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.24e-11;53!UBERON:0001045;1.68e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.94e-10;10!DOID:630;1.68e-07;1!DOID:0050177;1.68e-07;1!DOID:12603;1.68e-07;1!DOID:0050427;1.68e-07;1!DOID:0060060;4.08e-07;1!DOID:0060073;4.08e-07;1!DOID:0060061;4.08e-07;1!DOID:8675;4.08e-07;1!DOID:8691;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.01e-10,10;DOID:630,1.44e-07,1;DOID:0050177,1.44e-07,1;DOID:0050427,1.44e-07,1;DOID:12603,2.09e-07,1;DOID:0060073,3.02e-07,1;DOID:8675,3.02e-07,1;DOID:0060060,3.85e-07,1;DOID:0060061,3.85e-07,1;DOID:8691,3.85e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.68e-07;1!UBERON:0001153;1.68e-07;1!UBERON:0009854;1.68e-07;1!UBERON:0002372;4.08e-07;1!UBERON:0001961;4.08e-07;1!UBERON:0001744;4.08e-07;1!UBERON:0001042;4.08e-07;1!UBERON:0001735;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.36e-07,1;UBERON:0001153,1.36e-07,1;UBERON:0001045,1.36e-07,1;UBERON:0002372,5.50e-07,1;UBERON:0001961,5.50e-07,1;UBERON:0001744,5.50e-07,1;UBERON:0001735,5.50e-07,1 | |||
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| |||
|short_description=p9@PTPN9 | |||
}} |
Revision as of 08:19, 11 September 2013
Short description: | p9@PTPN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PTPN9_5end |
Coexpression cluster: | NA |
Association with transcript: | -287bp_to_ENST00000306726, ENST00000544966_5end |
EntrezGene: | PTPN9 |
HGNC: | 9661 |
UniProt: | P43378F5H2Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.74e-23 | 24 |
pro-B cell | 3.74e-23 | 24 |
lymphocyte | 2.58e-16 | 53 |
common lymphoid progenitor | 2.58e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.44e-14 | 52 |
nongranular leukocyte | 1.07e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.18e-09 | 120 |
leukocyte | 7.38e-09 | 136 |
hematopoietic oligopotent progenitor cell | 4.90e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.90e-08 | 161 |
hematopoietic cell | 5.94e-08 | 177 |
hematopoietic stem cell | 1.49e-07 | 168 |
B-1 B cell | 3.02e-07 | 1 |
B cell | 7.41e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.36e-07 | 1 |
caecum | 1.36e-07 | 1 |
midgut | 1.36e-07 | 1 |
tonsil | 5.50e-07 | 1 |
mucosa-associated lymphoid tissue | 5.50e-07 | 1 |
lymphoid tissue | 5.50e-07 | 1 |
tonsillar ring | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.01e-10 | 10 |
genetic disease | 1.44e-07 | 1 |
monogenic disease | 1.44e-07 | 1 |
xeroderma pigmentosum | 1.44e-07 | 1 |
acute leukemia | 2.09e-07 | 1 |
lymphatic system cancer | 3.02e-07 | 1 |
lymphosarcoma | 3.02e-07 | 1 |
non-Hodgkin lymphoma | 3.85e-07 | 1 |
cutaneous T cell lymphoma | 3.85e-07 | 1 |
mycosis fungoides | 3.85e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.