FFCP PHASE1:Hg19::chr18:55254141..55254152,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2235|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3647|TSSclassifier=S|UniProt=P22830|association_with_transcript=-137bp_to_ENST00000262093_5end|coexpression_cluster_id=C14|description=CAGE_peak_8_at_FECH_5end|id=chr18:55254141..55254152,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;5.55e-16;2!CL:0000558;5.55e-16;2!CL:0002553;7.01e-09;1!CL:0000167;2.55e-08;1!CL:0000164;2.55e-08;1!CL:0000502;2.55e-08;1!CL:0000172;2.55e-08;1!CL:0000319;2.55e-08;1!CL:0000173;2.55e-08;1|ontology_enrichment_celltype_v019_2=CL:0000764,4.79e-16,2;CL:0000765,4.79e-16,2;CL:0000050,4.79e-16,2;CL:0000038,4.79e-16,2;CL:0000558,4.79e-16,2;CL:0000547,4.79e-16,2;CL:0000549,4.79e-16,2;CL:0000550,4.79e-16,2;CL:0000552,4.79e-16,2;CL:0002553,7.01e-09,1;CL:0000167,2.46e-08,1;CL:0000164,2.46e-08,1;CL:0000502,2.46e-08,1;CL:0000172,2.46e-08,1;CL:0000173,2.46e-08,1;CL:0002351,2.46e-08,1;CL:0000319,3.06e-08,1|ontology_enrichment_development_v019=CL:0002351;2.55e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.27e-08;1!DOID:1357;1.27e-08;1!DOID:3030;2.55e-08;1!DOID:4430;2.55e-08;1!DOID:0050615;1.67e-07;16|ontology_enrichment_disease_v019_2=DOID:0050619,1.18e-08,1;DOID:1357,1.18e-08,1;DOID:4430,2.46e-08,1;DOID:3030,3.06e-08,1;DOID:0050615,1.64e-07,16|ontology_enrichment_uberon=UBERON:0000178!7.00e-07!15;UBERON:0000179!7.00e-07!15;UBERON:0000463!7.00e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-38;15!UBERON:0000179;2.74e-38;15!UBERON:0000463;2.74e-38;15!UBERON:0002390;1.02e-19;32!UBERON:0002193;1.03e-12;42!UBERON:0001764;1.27e-08;1!UBERON:0001825;1.27e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.58e-38,15;UBERON:0000179,2.58e-38,15;UBERON:0000463,2.58e-38,15;UBERON:0002193,8.16e-09,108;UBERON:0001764,1.18e-08,1;UBERON:0001825,1.18e-08,1;UBERON:0002390,2.24e-08,98;UBERON:0003061,2.24e-08,98|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,1.7931249457037,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0,1.70215567407342,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,1.82032272387605,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0,0,0.34444334449382,0.364182336013434,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,5.04297716285649,3.66009631434861,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,6.5968189200182,3.0585488285695,1.70894156152249,3.09701308095126,2.46817363851717,3.24236655596359,3.24018862342869,7.13812658664843,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0.895105873378046,0,0.197286811273867,2.3948309234694,0,0,0,0,0.260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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2235 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3647 | |||
|TSSclassifier=S | |||
|UniProt=P22830 | |||
|association_with_transcript=-137bp_to_ENST00000262093_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_FECH_5end | |||
|id=chr18:55254141..55254152,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.55e-16;2!CL:0000558;5.55e-16;2!CL:0002553;7.01e-09;1!CL:0000167;2.55e-08;1!CL:0000164;2.55e-08;1!CL:0000502;2.55e-08;1!CL:0000172;2.55e-08;1!CL:0000319;2.55e-08;1!CL:0000173;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.79e-16,2;CL:0000765,4.79e-16,2;CL:0000050,4.79e-16,2;CL:0000038,4.79e-16,2;CL:0000558,4.79e-16,2;CL:0000547,4.79e-16,2;CL:0000549,4.79e-16,2;CL:0000550,4.79e-16,2;CL:0000552,4.79e-16,2;CL:0002553,7.01e-09,1;CL:0000167,2.46e-08,1;CL:0000164,2.46e-08,1;CL:0000502,2.46e-08,1;CL:0000172,2.46e-08,1;CL:0000173,2.46e-08,1;CL:0002351,2.46e-08,1;CL:0000319,3.06e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.55e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.27e-08;1!DOID:1357;1.27e-08;1!DOID:3030;2.55e-08;1!DOID:4430;2.55e-08;1!DOID:0050615;1.67e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.18e-08,1;DOID:1357,1.18e-08,1;DOID:4430,2.46e-08,1;DOID:3030,3.06e-08,1;DOID:0050615,1.64e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.00e-07!15;UBERON:0000179!7.00e-07!15;UBERON:0000463!7.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-38;15!UBERON:0000179;2.74e-38;15!UBERON:0000463;2.74e-38;15!UBERON:0002390;1.02e-19;32!UBERON:0002193;1.03e-12;42!UBERON:0001764;1.27e-08;1!UBERON:0001825;1.27e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.58e-38,15;UBERON:0000179,2.58e-38,15;UBERON:0000463,2.58e-38,15;UBERON:0002193,8.16e-09,108;UBERON:0001764,1.18e-08,1;UBERON:0001825,1.18e-08,1;UBERON:0002390,2.24e-08,98;UBERON:0003061,2.24e-08,98 | |||
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| |||
|short_description=p8@FECH | |||
}} |
Revision as of 17:49, 11 September 2013
Short description: | p8@FECH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FECH_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -137bp_to_ENST00000262093_5end |
EntrezGene: | FECH |
HGNC: | 3647 |
UniProt: | P22830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.79e-16 | 2 |
erythroblast | 4.79e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 4.79e-16 | 2 |
erythroid progenitor cell | 4.79e-16 | 2 |
reticulocyte | 4.79e-16 | 2 |
proerythroblast | 4.79e-16 | 2 |
basophilic erythroblast | 4.79e-16 | 2 |
polychromatophilic erythroblast | 4.79e-16 | 2 |
orthochromatic erythroblast | 4.79e-16 | 2 |
lung fibroblast | 7.01e-09 | 1 |
peptide hormone secreting cell | 2.46e-08 | 1 |
enteroendocrine cell | 2.46e-08 | 1 |
type D enteroendocrine cell | 2.46e-08 | 1 |
somatostatin secreting cell | 2.46e-08 | 1 |
pancreatic D cell | 2.46e-08 | 1 |
progenitor cell of endocrine pancreas | 2.46e-08 | 1 |
mucus secreting cell | 3.06e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.58e-38 | 15 |
haemolymphatic fluid | 2.58e-38 | 15 |
organism substance | 2.58e-38 | 15 |
hemolymphoid system | 8.16e-09 | 108 |
maxillary sinus | 1.18e-08 | 1 |
paranasal sinus | 1.18e-08 | 1 |
hematopoietic system | 2.24e-08 | 98 |
blood island | 2.24e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.18e-08 | 1 |
maxillary sinus cancer | 1.18e-08 | 1 |
somatostatinoma | 2.46e-08 | 1 |
mucinous adenocarcinoma | 3.06e-08 | 1 |
respiratory system cancer | 1.64e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.