FFCP PHASE1:Hg19::chr19:41744439..41744453,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:41744439..41744453,+|id=chr19:41744439..41744453,+|ontology_enrichment_celltype=CL:0000055!7.63e-10!180;CL:0000680!2.61e-07!57;CL:0000056!2.61e-07!57;CL:0000355!2.61e-07!57;CL:0000187!2.81e-07!54|ontology_enrichment_celltype_v019=CL:0000511;8.01e-18;1!CL:0002625;8.01e-18;1!CL:0000216;8.01e-18;1!CL:0000154;5.67e-12;6!CL:0002596;8.68e-10;2!CL:0000317;1.38e-09;2!CL:1000448;1.38e-09;2!CL:0002308;1.38e-09;2!CL:0002140;1.38e-09;2!CL:0002593;1.38e-09;2!CL:0002567;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000511,4.44e-18,1;CL:0002625,4.44e-18,1;CL:0000216,4.44e-18,1;CL:0000154,5.08e-12,6;CL:0002596,8.69e-10,2;CL:0000317,1.57e-09,2;CL:1000448,1.57e-09,2;CL:0002308,1.57e-09,2;CL:0002140,1.57e-09,2;CL:0002593,1.86e-09,2;CL:0002567,8.62e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2|ontology_enrichment_uberon=UBERON:0005256!5.14e-08!143;UBERON:0000914!1.02e-07!83;UBERON:0002329!1.02e-07!83;UBERON:0003077!1.02e-07!83;UBERON:0003059!1.02e-07!83;UBERON:0007282!1.02e-07!83;UBERON:0009618!1.02e-07!83;UBERON:0007285!1.02e-07!83;UBERON:0002100!1.77e-07!216;UBERON:0000490!1.92e-07!138;UBERON:0002385!2.91e-07!63;UBERON:0001015!2.91e-07!63;UBERON:0000383!2.91e-07!63;UBERON:0001134!4.54e-07!61;UBERON:0002036!4.54e-07!61;UBERON:0003082!4.54e-07!61;UBERON:0000475!4.94e-07!365|ontology_enrichment_uberon_v019=UBERON:0001136;8.01e-18;1!UBERON:0001343;8.01e-18;1!UBERON:0004910;8.01e-18;1!UBERON:0004813;8.01e-18;1!UBERON:0005396;8.68e-10;2!UBERON:0002419;1.38e-09;2!UBERON:0007771;1.38e-09;2!UBERON:0003297;1.38e-09;2!UBERON:0001821;1.38e-09;2!UBERON:0004909;1.38e-09;2!UBERON:0003487;1.38e-09;2!UBERON:0002456;1.38e-09;2!UBERON:0001820;1.38e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.44e-18,1;UBERON:0001343,4.44e-18,1;UBERON:0004910,4.44e-18,1;UBERON:0005154,4.44e-18,1;UBERON:0005295,4.44e-18,1;UBERON:0004813,4.44e-18,1;UBERON:0005297,4.44e-18,1;UBERON:0005294,4.44e-18,1;UBERON:0010141,4.44e-18,1;UBERON:0005891,4.44e-18,1;UBERON:0005396,8.69e-10,2;UBERON:0004909,1.03e-09,2;UBERON:0002419,1.57e-09,2;UBERON:0007771,1.57e-09,2;UBERON:0003297,1.57e-09,2;UBERON:0001821,1.57e-09,2;UBERON:0003487,1.57e-09,2;UBERON:0001820,1.57e-09,2;UBERON:0005089,1.57e-09,2;UBERON:0005088,1.57e-09,2;UBERON:0002456,1.86e-09,2;UBERON:0004871,3.41e-09,8|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.579386075843295,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0.496971951695318,0.886413581652058,0,0.573673241497627,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0,0,0,0,0.600182192168805,0,0,0.744467425326359,0,0.292311015483596,0,0.184099797284599,0.646584227275248,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0.177561725313127,0.164254312027618,0,0,0,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.655622074797121,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0.636406495851874,2.35484592059769,0.179872457583315,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0.409499734223957,0.282810863907425,0,0,0,0.438450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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:41744439..41744453,+ | |||
|id=chr19:41744439..41744453,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.63e-10!180;CL:0000680!2.61e-07!57;CL:0000056!2.61e-07!57;CL:0000355!2.61e-07!57;CL:0000187!2.81e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.01e-18;1!CL:0002625;8.01e-18;1!CL:0000216;8.01e-18;1!CL:0000154;5.67e-12;6!CL:0002596;8.68e-10;2!CL:0000317;1.38e-09;2!CL:1000448;1.38e-09;2!CL:0002308;1.38e-09;2!CL:0002140;1.38e-09;2!CL:0002593;1.38e-09;2!CL:0002567;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.44e-18,1;CL:0002625,4.44e-18,1;CL:0000216,4.44e-18,1;CL:0000154,5.08e-12,6;CL:0002596,8.69e-10,2;CL:0000317,1.57e-09,2;CL:1000448,1.57e-09,2;CL:0002308,1.57e-09,2;CL:0002140,1.57e-09,2;CL:0002593,1.86e-09,2;CL:0002567,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.14e-08!143;UBERON:0000914!1.02e-07!83;UBERON:0002329!1.02e-07!83;UBERON:0003077!1.02e-07!83;UBERON:0003059!1.02e-07!83;UBERON:0007282!1.02e-07!83;UBERON:0009618!1.02e-07!83;UBERON:0007285!1.02e-07!83;UBERON:0002100!1.77e-07!216;UBERON:0000490!1.92e-07!138;UBERON:0002385!2.91e-07!63;UBERON:0001015!2.91e-07!63;UBERON:0000383!2.91e-07!63;UBERON:0001134!4.54e-07!61;UBERON:0002036!4.54e-07!61;UBERON:0003082!4.54e-07!61;UBERON:0000475!4.94e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.01e-18;1!UBERON:0001343;8.01e-18;1!UBERON:0004910;8.01e-18;1!UBERON:0004813;8.01e-18;1!UBERON:0005396;8.68e-10;2!UBERON:0002419;1.38e-09;2!UBERON:0007771;1.38e-09;2!UBERON:0003297;1.38e-09;2!UBERON:0001821;1.38e-09;2!UBERON:0004909;1.38e-09;2!UBERON:0003487;1.38e-09;2!UBERON:0002456;1.38e-09;2!UBERON:0001820;1.38e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.44e-18,1;UBERON:0001343,4.44e-18,1;UBERON:0004910,4.44e-18,1;UBERON:0005154,4.44e-18,1;UBERON:0005295,4.44e-18,1;UBERON:0004813,4.44e-18,1;UBERON:0005297,4.44e-18,1;UBERON:0005294,4.44e-18,1;UBERON:0010141,4.44e-18,1;UBERON:0005891,4.44e-18,1;UBERON:0005396,8.69e-10,2;UBERON:0004909,1.03e-09,2;UBERON:0002419,1.57e-09,2;UBERON:0007771,1.57e-09,2;UBERON:0003297,1.57e-09,2;UBERON:0001821,1.57e-09,2;UBERON:0003487,1.57e-09,2;UBERON:0001820,1.57e-09,2;UBERON:0005089,1.57e-09,2;UBERON:0005088,1.57e-09,2;UBERON:0002456,1.86e-09,2;UBERON:0004871,3.41e-09,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.579386075843295,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0.496971951695318,0.886413581652058,0,0.573673241497627,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0,0,0,0,0.600182192168805,0,0,0.744467425326359,0,0.292311015483596,0,0.184099797284599,0.646584227275248,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0.177561725313127,0.164254312027618,0,0,0,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.655622074797121,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0.636406495851874,2.35484592059769,0.179872457583315,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.376051641746286,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0.252332849670158,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0.640364075266293,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:41744439..41744453,+ | |||
}} |
Revision as of 20:46, 11 September 2013
Short description: | p@chr19:41744439..41744453, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41744439..41744453, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.44e-18 | 1 |
seminiferous tubule epithelial cell | 4.44e-18 | 1 |
Sertoli cell | 4.44e-18 | 1 |
protein secreting cell | 5.08e-12 | 6 |
smooth muscle cell of the carotid artery | 8.69e-10 | 2 |
sebum secreting cell | 1.57e-09 | 2 |
epithelial cell of sweat gland | 1.57e-09 | 2 |
epithelial cell of skin gland | 1.57e-09 | 2 |
acinar cell of sebaceous gland | 1.57e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 1.86e-09 | 2 |
light melanocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.44e-18 | 1 |
seminiferous tubule of testis | 4.44e-18 | 1 |
epithelium of male gonad | 4.44e-18 | 1 |
epithelial cord | 4.44e-18 | 1 |
sex cord | 4.44e-18 | 1 |
seminiferous tubule epithelium | 4.44e-18 | 1 |
testis sex cord | 4.44e-18 | 1 |
genital ridge | 4.44e-18 | 1 |
primitive sex cord of indifferent gonad | 4.44e-18 | 1 |
coelomic epithelium | 4.44e-18 | 1 |
carotid artery segment | 8.69e-10 | 2 |
epithelium of gonad | 1.03e-09 | 2 |
skin gland | 1.57e-09 | 2 |
epidermis gland | 1.57e-09 | 2 |
gland of integumental system | 1.57e-09 | 2 |
sebaceous gland | 1.57e-09 | 2 |
skin sebaceous gland | 1.57e-09 | 2 |
sweat gland | 1.57e-09 | 2 |
sweat gland placode | 1.57e-09 | 2 |
sebaceous gland placode | 1.57e-09 | 2 |
internal thoracic artery | 1.86e-09 | 2 |
somatic layer of lateral plate mesoderm | 3.41e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.46e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.