FFCP PHASE1:Hg19::chr19:52716266..52716288,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5518|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9302|TSSclassifier=N|UniProt=|association_with_transcript=183bp_to_ENST00000473820_5end|description=CAGE_peak_3_at_PPP2R1A_5end|id=chr19:52716266..52716288,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000317;3.08e-09;2!CL:1000448;3.08e-09;2!CL:0002308;3.08e-09;2!CL:0002140;3.08e-09;2!CL:0002559;5.54e-08;5!CL:0002188;5.54e-08;5|ontology_enrichment_celltype_v019_2=CL:0000317,4.17e-09,2;CL:1000448,4.17e-09,2;CL:0002308,4.17e-09,2;CL:0002140,4.17e-09,2;CL:0002559,1.71e-08,5;CL:0002188,4.08e-08,5;CL:0000346,7.25e-07,3;CL:1000428,7.25e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001737;2.77e-16;9!UBERON:0001557;2.77e-16;9!UBERON:0002419;3.08e-09;2!UBERON:0007771;3.08e-09;2!UBERON:0003297;3.08e-09;2!UBERON:0001821;3.08e-09;2!UBERON:0003487;3.08e-09;2!UBERON:0001820;3.08e-09;2!UBERON:0002073;5.54e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.79e-16,9;UBERON:0002419,4.17e-09,2;UBERON:0007771,4.17e-09,2;UBERON:0003297,4.17e-09,2;UBERON:0001821,4.17e-09,2;UBERON:0003487,4.17e-09,2;UBERON:0001820,4.17e-09,2;UBERON:0005089,4.17e-09,2;UBERON:0005088,4.17e-09,2;UBERON:0002073,1.71e-08,5;UBERON:0005086,1.71e-08,5;UBERON:0001557,1.85e-07,19;UBERON:0001003,7.10e-07,15;UBERON:0007376,7.10e-07,15;UBERON:0007383,7.10e-07,15;UBERON:0000412,7.25e-07,3;UBERON:0001992,7.25e-07,3|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0.783556884599516,0.982935746006035,1.39560233594486,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.738726348460727,0.816002764977012,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.164201178899891,0.472264687882075,0.786728553697808,0,0,0.919421224478927,0,0.369754010166788,0.154934401160603,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0,0,0,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0.632924774881769,0.211255286311942,0,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.520237390239513,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,0,0,0,1.00267582127178,0.289693037921647,0.795285947051099,0,0.472674085820339,0.886917589850256,0.175669571386252,0.327447688744282,0,0.741568885568859,0,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0,0,0.17859945656816,0,0,0,2.84779697870439,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0,0.286836620748814,0.354668382198357,0.560677600142307,0,1.2333377420858,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.421352420106746,0,0.368502951935304,0,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0.567160915800105,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0,0,0.389748020644795,0.504867548488229,0.184099797284599,0.484938170456436,0.710019185033229,0.201504196455281,0,0,0,0.286804595389004,0.609868530647977,0.132529768321485,0.813357600086629,0.414644220061482,0.756962552626885,0.36497735907583,1.56449532329816,1.92972281457866,0,0.464367928031979,1.44375896333917,1.30137480043828,1.34867752062481,0.482022059766964,0.772057809126758,1.08939722046203,0,4.1797705529651,1.37355025587742,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0.658501712451753,0,0.402115889646523,0.370353780634118,0,0,2.88662684050547,0.34779121492523,0.234817388471643,0.144366447761074,0,0.570762456703795,2.37061319387782,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.425325291727159,0,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0.308482478109971,0.901029173531752,0,0.112131084345361,0,0.4400297149257,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0.144781306667579,1.02738161275192,0.179060963239896,0.112085143993527,0.39406152040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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9302 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=183bp_to_ENST00000473820_5end | |||
|description=CAGE_peak_3_at_PPP2R1A_5end | |||
|id=chr19:52716266..52716288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;3.08e-09;2!CL:1000448;3.08e-09;2!CL:0002308;3.08e-09;2!CL:0002140;3.08e-09;2!CL:0002559;5.54e-08;5!CL:0002188;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.17e-09,2;CL:1000448,4.17e-09,2;CL:0002308,4.17e-09,2;CL:0002140,4.17e-09,2;CL:0002559,1.71e-08,5;CL:0002188,4.08e-08,5;CL:0000346,7.25e-07,3;CL:1000428,7.25e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.77e-16;9!UBERON:0001557;2.77e-16;9!UBERON:0002419;3.08e-09;2!UBERON:0007771;3.08e-09;2!UBERON:0003297;3.08e-09;2!UBERON:0001821;3.08e-09;2!UBERON:0003487;3.08e-09;2!UBERON:0001820;3.08e-09;2!UBERON:0002073;5.54e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.79e-16,9;UBERON:0002419,4.17e-09,2;UBERON:0007771,4.17e-09,2;UBERON:0003297,4.17e-09,2;UBERON:0001821,4.17e-09,2;UBERON:0003487,4.17e-09,2;UBERON:0001820,4.17e-09,2;UBERON:0005089,4.17e-09,2;UBERON:0005088,4.17e-09,2;UBERON:0002073,1.71e-08,5;UBERON:0005086,1.71e-08,5;UBERON:0001557,1.85e-07,19;UBERON:0001003,7.10e-07,15;UBERON:0007376,7.10e-07,15;UBERON:0007383,7.10e-07,15;UBERON:0000412,7.25e-07,3;UBERON:0001992,7.25e-07,3 | |||
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| |||
|short_description=p3@PPP2R1A | |||
}} |
Revision as of 22:10, 11 September 2013
Short description: | p3@PPP2R1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PPP2R1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 183bp_to_ENST00000473820_5end |
EntrezGene: | PPP2R1A |
HGNC: | 9302 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.17e-09 | 2 |
epithelial cell of sweat gland | 4.17e-09 | 2 |
epithelial cell of skin gland | 4.17e-09 | 2 |
acinar cell of sebaceous gland | 4.17e-09 | 2 |
hair follicle cell | 1.71e-08 | 5 |
glomerular endothelial cell | 4.08e-08 | 5 |
hair follicle dermal papilla cell | 7.25e-07 | 3 |
stem cell of epidermis | 7.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.79e-16 | 9 |
skin gland | 4.17e-09 | 2 |
epidermis gland | 4.17e-09 | 2 |
gland of integumental system | 4.17e-09 | 2 |
sebaceous gland | 4.17e-09 | 2 |
skin sebaceous gland | 4.17e-09 | 2 |
sweat gland | 4.17e-09 | 2 |
sweat gland placode | 4.17e-09 | 2 |
sebaceous gland placode | 4.17e-09 | 2 |
hair follicle | 1.71e-08 | 5 |
hair follicle placode | 1.71e-08 | 5 |
upper respiratory tract | 1.85e-07 | 19 |
skin epidermis | 7.10e-07 | 15 |
outer epithelium | 7.10e-07 | 15 |
enveloping layer of ectoderm | 7.10e-07 | 15 |
dermal papilla | 7.25e-07 | 3 |
papillary layer of dermis | 7.25e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.