FFCP PHASE1:Hg19::chr19:6584243..6584253,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1828|description=CAGE_peak_at_chr19:6584243..6584253,-|id=chr19:6584243..6584253,-|ontology_enrichment_celltype=CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000542!1.43e-08!53;CL:0000051!1.43e-08!53;CL:0000988!7.66e-08!182;CL:0000838!1.79e-07!52;CL:0000785!5.96e-07!2;CL:0000955!5.96e-07!2;CL:0000818!5.96e-07!2;CL:0000954!5.96e-07!2;CL:0000816!5.96e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!1.01e-13!10;DOID:2531!2.72e-12!51;DOID:0060083!2.72e-12!51;DOID:14566!3.21e-11!239;DOID:162!7.10e-11!235;DOID:0050686!1.36e-07!137;DOID:74!8.71e-07!2;DOID:1240!8.85e-07!39|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:0060058;7.67e-11;10|ontology_enrichment_disease_v019_2=DOID:6193,2.16e-26,1;DOID:3350,6.43e-14,2;DOID:0060058,8.06e-11,10|ontology_enrichment_uberon=UBERON:0001737!2.50e-11!9|ontology_enrichment_uberon_v019=UBERON:0002331;4.76e-23;10!UBERON:0000178;1.24e-15;15!UBERON:0000179;1.24e-15;15!UBERON:0000463;1.24e-15;15!UBERON:0000478;4.92e-10;24!UBERON:0002390;9.27e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.13e-23,10;UBERON:0000358,5.13e-23,10;UBERON:0000307,5.13e-23,10;UBERON:0000091,5.13e-23,10;UBERON:0000087,5.13e-23,10;UBERON:0007010,5.13e-23,10;UBERON:0007806,5.13e-23,10;UBERON:0008780,5.13e-23,10;UBERON:0005728,5.13e-23,10;UBERON:0000178,1.31e-15,15;UBERON:0000179,1.31e-15,15;UBERON:0000463,1.31e-15,15;UBERON:0000478,5.07e-10,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,1.70603078984906,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,1.27753871307098,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.60633120630454,2.40170483862547,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40780445460263,0,0,0,0,0.176512253383001,0,0.137041924646751,0,0,0,0,0,0.599428828746391,0.288180834308212,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.79994958341972,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466|short_description=p@chr19:6584243..6584253,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1828 | |||
|description=CAGE_peak_at_chr19:6584243..6584253,- | |||
|id=chr19:6584243..6584253,- | |||
|ontology_enrichment_celltype=CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000542!1.43e-08!53;CL:0000051!1.43e-08!53;CL:0000988!7.66e-08!182;CL:0000838!1.79e-07!52;CL:0000785!5.96e-07!2;CL:0000955!5.96e-07!2;CL:0000818!5.96e-07!2;CL:0000954!5.96e-07!2;CL:0000816!5.96e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.01e-13!10;DOID:2531!2.72e-12!51;DOID:0060083!2.72e-12!51;DOID:14566!3.21e-11!239;DOID:162!7.10e-11!235;DOID:0050686!1.36e-07!137;DOID:74!8.71e-07!2;DOID:1240!8.85e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:0060058;7.67e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.16e-26,1;DOID:3350,6.43e-14,2;DOID:0060058,8.06e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.50e-11!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.76e-23;10!UBERON:0000178;1.24e-15;15!UBERON:0000179;1.24e-15;15!UBERON:0000463;1.24e-15;15!UBERON:0000478;4.92e-10;24!UBERON:0002390;9.27e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.13e-23,10;UBERON:0000358,5.13e-23,10;UBERON:0000307,5.13e-23,10;UBERON:0000091,5.13e-23,10;UBERON:0000087,5.13e-23,10;UBERON:0007010,5.13e-23,10;UBERON:0007806,5.13e-23,10;UBERON:0008780,5.13e-23,10;UBERON:0005728,5.13e-23,10;UBERON:0000178,1.31e-15,15;UBERON:0000179,1.31e-15,15;UBERON:0000463,1.31e-15,15;UBERON:0000478,5.07e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,1.70603078984906,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,1.27753871307098,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.60633120630454,2.40170483862547,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40780445460263,0,0,0,0,0.176512253383001,0,0.137041924646751,0,0,0,0,0,0.599428828746391,0.288180834308212,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.79994958341972,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr19:6584243..6584253,- | |||
}} |
Revision as of 22:47, 11 September 2013
Short description: | p@chr19:6584243..6584253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6584243..6584253, - |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.13e-23 | 10 |
blastocyst | 5.13e-23 | 10 |
blastula | 5.13e-23 | 10 |
bilaminar disc | 5.13e-23 | 10 |
inner cell mass | 5.13e-23 | 10 |
cleaving embryo | 5.13e-23 | 10 |
connecting stalk | 5.13e-23 | 10 |
inner cell mass derived epiblast | 5.13e-23 | 10 |
extraembryonic mesoderm | 5.13e-23 | 10 |
blood | 1.31e-15 | 15 |
haemolymphatic fluid | 1.31e-15 | 15 |
organism substance | 1.31e-15 | 15 |
extraembryonic structure | 5.07e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.16e-26 | 1 |
mesenchymal cell neoplasm | 6.43e-14 | 2 |
lymphoma | 8.06e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.