FFCP PHASE1:Hg19::chr19:6591068..6591101,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11937|TSSclassifier=S|UniProt=B4DPR8|association_with_transcript=23bp_to_ENST00000423145_5end|coexpression_cluster_id=C21|description=CAGE_peak_2_at_CD70_5end|id=chr19:6591068..6591101,-|ontology_enrichment_celltype=CL:0000542!5.27e-15!53;CL:0000051!5.27e-15!53;CL:0000838!2.53e-14!52;CL:0000945!3.96e-13!24;CL:0000826!3.96e-13!24;CL:1000497!9.28e-07!18;CL:0002518!9.28e-07!18|ontology_enrichment_celltype_v019=CL:0000945;3.90e-22;24!CL:0000542;2.06e-09;53!CL:1000497;7.52e-09;17!CL:0002518;7.52e-09;17!CL:0000236;2.44e-08;13!CL:1000449;8.37e-07;15|ontology_enrichment_celltype_v019_2=CL:0000945,2.71e-22,24;CL:0000826,2.71e-22,24;CL:0000542,4.61e-15,53;CL:0000051,4.61e-15,53;CL:0000838,4.15e-14,52;CL:0000236,1.19e-09,14;CL:1000497,7.98e-09,17;CL:0002518,7.98e-09,17;CL:1000449,8.83e-07,15|ontology_enrichment_development_v019=CL:0000051;2.06e-09;53|ontology_enrichment_disease=DOID:14566!9.96e-09!239;DOID:162!3.18e-08!235|ontology_enrichment_disease_v019=DOID:0060058;5.52e-10;10|ontology_enrichment_disease_v019_2=DOID:14566,4.04e-13,239;DOID:162,1.69e-12,235;DOID:0060058,5.48e-10,10;DOID:2531,3.76e-09,51;DOID:0060083,3.76e-09,51;DOID:0050686,8.94e-08,137|ontology_enrichment_uberon=UBERON:0001737!2.36e-08!9;UBERON:0001557!2.40e-08!19|ontology_enrichment_uberon_v019=UBERON:0001737;5.97e-13;9!UBERON:0001557;5.97e-13;9!UBERON:0002113;2.08e-09;24!UBERON:0011143;2.08e-09;24!UBERON:0000489;4.01e-07;29!UBERON:0006555;8.37e-07;15!UBERON:0004819;8.37e-07;15!UBERON:0001285;8.37e-07;15!UBERON:0007684;8.37e-07;15!UBERON:0006554;9.19e-07;30!UBERON:0001008;9.19e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.43e-13,9;UBERON:0002113,2.34e-08,26;UBERON:0003918,2.34e-08,26;UBERON:0011143,2.34e-08,26;UBERON:0005095,2.34e-08,26;UBERON:0007687,2.34e-08,26;UBERON:0001557,4.46e-07,19;UBERON:0004211,8.83e-07,15;UBERON:0009773,8.83e-07,15;UBERON:0001231,8.83e-07,15;UBERON:0001285,8.83e-07,15;UBERON:0007684,8.83e-07,15;UBERON:0004208,8.83e-07,15|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,2.19093027116212,2.43966399395253,0.61560529038394,4.48801520737357,9.40364164434263,0,0.684372125364421,0.125542639594803,46.99424453499,41.9534012089223,34.8688761219599,0,0.383829398097213,0.154816123316076,0,0,0,20.296406552039,75.4918624508208,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.27683166757279,0,1.70692089026603,1.20118796110804,5.74752439954483,0,0,5.12291672198504,9.39579502993502,3.44045905312706,0,0.560508562981536,0,0,1.17903228824749,0.411202997999018,11.0343086957848,0,0,0,16.4887476190057,2.94605907474837,1.10766947291811,1.35401931882508,42.1420441897471,38.7576855728437,9.04408475320219,4.42160028457357,2.31842468588042,0,0,0,4.07913633711238,0.383220493601921,0.68725489096526,0,0.637130828648193,0.651083453856419,0,0,0.255973222308837,1.24930726552346,0.947109008176067,0,0.80642697289893,0.802320587350522,0.434473211648397,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,1.06400514659507,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0.853815942907168,0.265059536642971,0.929551542956147,1.65857688024593,1.26160425437814,0,0,0,0,0.464367928031979,0,19.4023152065344,11.8009283054671,9.88145222522276,18.4190934463098,11.5476105368975,8.30447166888838,20.0898649158645,16.4826030705291,12.6966561792309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,2.40274446275134,0.571652865261156,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.394061520403854,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,1.24053903909388,0,0.841980283299221,0,1.02341449813341,0,0,0.154209693802656,0.355123450626254,0,0,0,0,0.200506470303285,0,0,0,0,0.902399225814824,0.231046011313244,3.92174884588428,2.92278449306521,1.37217117560738,2.27466768141793,0.170093705276516,11.0117117212091,6.16909010761157,4.6060894382455,6.52196706011309,1.01950509218015,0,2.68649705666614,0,0,0,0,0,0,4.67004270573551,4.29049399587058,0,0,0,3.48014585851639,0.7702430855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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |||
|TSSclassifier=S | |||
|UniProt=B4DPR8 | |||
|association_with_transcript=23bp_to_ENST00000423145_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_CD70_5end | |||
|id=chr19:6591068..6591101,- | |||
|ontology_enrichment_celltype=CL:0000542!5.27e-15!53;CL:0000051!5.27e-15!53;CL:0000838!2.53e-14!52;CL:0000945!3.96e-13!24;CL:0000826!3.96e-13!24;CL:1000497!9.28e-07!18;CL:0002518!9.28e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.90e-22;24!CL:0000542;2.06e-09;53!CL:1000497;7.52e-09;17!CL:0002518;7.52e-09;17!CL:0000236;2.44e-08;13!CL:1000449;8.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.71e-22,24;CL:0000826,2.71e-22,24;CL:0000542,4.61e-15,53;CL:0000051,4.61e-15,53;CL:0000838,4.15e-14,52;CL:0000236,1.19e-09,14;CL:1000497,7.98e-09,17;CL:0002518,7.98e-09,17;CL:1000449,8.83e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000051;2.06e-09;53 | |||
|ontology_enrichment_disease=DOID:14566!9.96e-09!239;DOID:162!3.18e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.52e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.04e-13,239;DOID:162,1.69e-12,235;DOID:0060058,5.48e-10,10;DOID:2531,3.76e-09,51;DOID:0060083,3.76e-09,51;DOID:0050686,8.94e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.36e-08!9;UBERON:0001557!2.40e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.97e-13;9!UBERON:0001557;5.97e-13;9!UBERON:0002113;2.08e-09;24!UBERON:0011143;2.08e-09;24!UBERON:0000489;4.01e-07;29!UBERON:0006555;8.37e-07;15!UBERON:0004819;8.37e-07;15!UBERON:0001285;8.37e-07;15!UBERON:0007684;8.37e-07;15!UBERON:0006554;9.19e-07;30!UBERON:0001008;9.19e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.43e-13,9;UBERON:0002113,2.34e-08,26;UBERON:0003918,2.34e-08,26;UBERON:0011143,2.34e-08,26;UBERON:0005095,2.34e-08,26;UBERON:0007687,2.34e-08,26;UBERON:0001557,4.46e-07,19;UBERON:0004211,8.83e-07,15;UBERON:0009773,8.83e-07,15;UBERON:0001231,8.83e-07,15;UBERON:0001285,8.83e-07,15;UBERON:0007684,8.83e-07,15;UBERON:0004208,8.83e-07,15 | |||
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| |||
|short_description=p2@CD70 | |||
}} |
Revision as of 22:47, 11 September 2013
Short description: | p2@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD70_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 23bp_to_ENST00000423145_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | B4DPR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.71e-22 | 24 |
pro-B cell | 2.71e-22 | 24 |
lymphocyte | 4.61e-15 | 53 |
common lymphoid progenitor | 4.61e-15 | 53 |
lymphoid lineage restricted progenitor cell | 4.15e-14 | 52 |
B cell | 1.19e-09 | 14 |
kidney cell | 7.98e-09 | 17 |
kidney epithelial cell | 7.98e-09 | 17 |
epithelial cell of nephron | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.43e-13 | 9 |
kidney | 2.34e-08 | 26 |
kidney mesenchyme | 2.34e-08 | 26 |
upper urinary tract | 2.34e-08 | 26 |
kidney rudiment | 2.34e-08 | 26 |
kidney field | 2.34e-08 | 26 |
upper respiratory tract | 4.46e-07 | 19 |
nephron epithelium | 8.83e-07 | 15 |
renal tubule | 8.83e-07 | 15 |
nephron tubule | 8.83e-07 | 15 |
nephron | 8.83e-07 | 15 |
uriniferous tubule | 8.83e-07 | 15 |
nephrogenic mesenchyme | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.04e-13 | 239 |
cancer | 1.69e-12 | 235 |
lymphoma | 5.48e-10 | 10 |
hematologic cancer | 3.76e-09 | 51 |
immune system cancer | 3.76e-09 | 51 |
organ system cancer | 8.94e-08 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.