FFCP PHASE1:Hg19::chr1:112282444..112282464,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100506343|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000430373,NR_038951,NR_038952,uc001ebq.1_5end|description=CAGE_peak_1_at_LOC100506343_5end|id=chr1:112282444..112282464,+|ontology_enrichment_celltype=CL:0000133!8.58e-07!59|ontology_enrichment_celltype_v019=CL:0002577;3.01e-09;3|ontology_enrichment_celltype_v019_2=CL:0002577,7.51e-10,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000924!1.44e-15!173;UBERON:0006601!1.44e-15!173;UBERON:0004121!1.68e-15!169;UBERON:0000073!3.52e-15!94;UBERON:0001016!3.52e-15!94;UBERON:0001869!2.27e-13!32;UBERON:0001017!3.62e-13!82;UBERON:0001893!1.23e-12!34;UBERON:0000955!1.41e-12!69;UBERON:0006238!1.41e-12!69;UBERON:0002020!4.11e-12!34;UBERON:0003528!4.11e-12!34;UBERON:0002791!4.42e-12!33;UBERON:0005743!5.66e-12!86;UBERON:0000956!1.03e-11!25;UBERON:0000203!1.03e-11!25;UBERON:0002619!2.94e-11!22;UBERON:0002616!4.84e-11!59;UBERON:0002780!7.77e-11!41;UBERON:0001890!7.77e-11!41;UBERON:0006240!7.77e-11!41;UBERON:0001049!1.77e-10!57;UBERON:0005068!1.77e-10!57;UBERON:0006241!1.77e-10!57;UBERON:0007135!1.77e-10!57;UBERON:0000033!2.39e-10!123;UBERON:0003080!2.79e-10!42;UBERON:0001950!5.88e-10!20;UBERON:0000468!7.96e-10!659;UBERON:0000153!1.17e-09!129;UBERON:0007811!1.17e-09!129;UBERON:0000064!2.95e-09!219;UBERON:0002346!1.19e-08!90;UBERON:0003075!1.23e-08!86;UBERON:0007284!1.23e-08!86;UBERON:0003056!1.81e-08!61;UBERON:0007023!1.94e-08!115;UBERON:0000467!1.75e-07!625;UBERON:0000480!2.32e-07!626;UBERON:0000922!5.96e-07!612;UBERON:0000475!9.81e-07!365|ontology_enrichment_uberon_v019=UBERON:0002619;6.22e-25;22!UBERON:0001950;5.40e-24;20!UBERON:0000956;1.31e-21;25!UBERON:0000203;1.31e-21;25!UBERON:0002791;7.69e-20;32!UBERON:0001869;2.51e-19;32!UBERON:0001893;1.40e-17;34!UBERON:0003528;1.42e-17;34!UBERON:0002020;1.42e-17;34!UBERON:0002780;2.20e-10;41!UBERON:0001890;2.20e-10;41!UBERON:0001870;1.15e-09;3!UBERON:0002021;2.02e-09;5!UBERON:0000955;2.40e-08;68!UBERON:0000010;2.74e-08;8!UBERON:0000073;6.22e-08;53!UBERON:0002616;6.22e-08;53!UBERON:0001016;6.52e-08;83!UBERON:0001017;3.89e-07;75!UBERON:0002702;3.93e-07;2!UBERON:0001987;4.98e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.18e-25,22;UBERON:0001950,1.42e-24,20;UBERON:0000956,3.07e-22,25;UBERON:0000203,3.07e-22,25;UBERON:0002791,1.16e-21,32;UBERON:0001869,1.16e-21,32;UBERON:0003528,3.64e-20,34;UBERON:0002020,3.64e-20,34;UBERON:0001893,3.64e-20,34;UBERON:0001016,7.93e-18,89;UBERON:0002780,4.59e-16,41;UBERON:0001890,4.59e-16,41;UBERON:0003080,4.59e-16,41;UBERON:0006240,4.59e-16,41;UBERON:0000955,1.35e-14,68;UBERON:0006238,1.35e-14,68;UBERON:0003056,1.15e-13,61;UBERON:0000073,4.72e-13,53;UBERON:0002616,4.72e-13,53;UBERON:0001017,1.11e-12,81;UBERON:0001049,3.96e-12,56;UBERON:0005068,3.96e-12,56;UBERON:0006241,3.96e-12,56;UBERON:0007135,3.96e-12,56;UBERON:0004121,1.13e-11,171;UBERON:0000924,1.13e-11,171;UBERON:0006601,1.13e-11,171;UBERON:0002346,1.52e-10,86;UBERON:0003075,4.93e-10,82;UBERON:0007284,4.93e-10,82;UBERON:0001870,8.71e-10,3;UBERON:0002021,1.13e-09,5;UBERON:0010371,9.80e-09,104;UBERON:0000010,1.67e-08,8;UBERON:0002702,1.65e-07,2;UBERON:0001987,1.79e-07,4;UBERON:0004340,1.79e-07,4;UBERON:0011216,7.19e-07,223;UBERON:0003124,7.20e-07,7;UBERON:0005631,7.60e-07,14;UBERON:0000158,7.60e-07,14;UBERON:0007023,8.28e-07,114|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,1.58260186937072,0.37129905888014,0.994192127183747,0,0.602694528023977,1.46062018077475,0,0.123121058076788,0.816002764977012,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.458426764241994,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0.516833518338658,1.06729878806013,0.66944122552934,0,0,1.70843440283719,0.367663080345869,0,0.535798369704479,0.44905874525234,0.450445921933289,0,0,0,0,3.87780264148325,0.872188104285069,1.98788780678127,0.12663051166458,0.264818361626438,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.817309515567294,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0.298897361103602,0.822041490506354,0.323745888736263,0.280901613404497,0,0.368502951935304,0.413303124703062,0,0.494533858557114,1.82032272387605,0.718618141816238,0.505008341862199,0.375355559615893,0,0,0.612975591598039,0.600952235626387,0.340296549480063,0.3587792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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100506343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000430373,NR_038951,NR_038952,uc001ebq.1_5end | |||
|description=CAGE_peak_1_at_LOC100506343_5end | |||
|id=chr1:112282444..112282464,+ | |||
|ontology_enrichment_celltype=CL:0000133!8.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.51e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;6.22e-25;22!UBERON:0001950;5.40e-24;20!UBERON:0000956;1.31e-21;25!UBERON:0000203;1.31e-21;25!UBERON:0002791;7.69e-20;32!UBERON:0001869;2.51e-19;32!UBERON:0001893;1.40e-17;34!UBERON:0003528;1.42e-17;34!UBERON:0002020;1.42e-17;34!UBERON:0002780;2.20e-10;41!UBERON:0001890;2.20e-10;41!UBERON:0001870;1.15e-09;3!UBERON:0002021;2.02e-09;5!UBERON:0000955;2.40e-08;68!UBERON:0000010;2.74e-08;8!UBERON:0000073;6.22e-08;53!UBERON:0002616;6.22e-08;53!UBERON:0001016;6.52e-08;83!UBERON:0001017;3.89e-07;75!UBERON:0002702;3.93e-07;2!UBERON:0001987;4.98e-07;4 | |||
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| |||
|short_description=p1@LOC100506343 | |||
}} |
Revision as of 23:33, 11 September 2013
Short description: | p1@LOC100506343 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100506343_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000430373, NR_038951, NR_038952, uc001ebq.1_5end |
EntrezGene: | LOC100506343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.51e-10 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.