FFCP PHASE1:Hg19::chr1:162954730..162954735,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:162954730..162954735,+|id=chr1:162954730..162954735,+|ontology_enrichment_celltype=CL:0000359!3.79e-33!32;CL:0000192!3.84e-24!42;CL:0000514!3.84e-24!42;CL:0000187!9.32e-18!54;CL:0000222!4.44e-17!119;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000183!7.19e-16!59;CL:0000393!1.57e-15!60;CL:0000211!1.57e-15!60;CL:0002594!3.15e-15!4;CL:1000306!3.92e-15!4;CL:0002547!3.92e-15!4;CL:0002592!1.37e-11!3;CL:1000413!7.56e-10!9;CL:0002544!1.02e-09!6;CL:0000055!1.33e-09!180;CL:0002539!2.90e-09!10;CL:0002589!7.92e-09!2;CL:0002596!2.17e-08!2;CL:0000220!2.87e-07!246;CL:0002321!3.74e-07!248|ontology_enrichment_celltype_v019=CL:0002589;3.93e-29;2!CL:0000359;7.81e-27;32!CL:0000192;1.28e-16;43!CL:0002581;1.78e-15;1!CL:1000306;2.65e-15;4!CL:0002547;2.65e-15;4!CL:0002594;4.23e-15;4!CL:0000187;7.55e-09;55!CL:0002596;2.15e-08;2!CL:0000393;8.40e-08;61!CL:0000211;8.40e-08;61|ontology_enrichment_celltype_v019_2=CL:0002589,4.55e-29,2;CL:0000359,1.25e-27,32;CL:0000192,2.06e-20,43;CL:0000514,2.06e-20,43;CL:0000187,8.03e-16,55;CL:0002581,1.54e-15,1;CL:1000306,1.92e-15,4;CL:0002547,1.92e-15,4;CL:0002594,4.23e-15,4;CL:0000680,5.72e-15,58;CL:0000056,5.72e-15,58;CL:0000355,5.72e-15,58;CL:0000393,3.36e-14,61;CL:0000211,3.36e-14,61;CL:0002596,1.73e-08,2;CL:0000222,8.66e-07,121|ontology_enrichment_development_v019=CL:0000514;1.28e-16;43!CL:0000355;1.33e-07;58|ontology_enrichment_disease=DOID:2394!1.90e-15!14;DOID:120!3.61e-09!27;DOID:193!2.01e-08!29|ontology_enrichment_disease_v019=DOID:2394;1.07e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14|ontology_enrichment_uberon=UBERON:0001637!5.06e-53!42;UBERON:0003509!5.06e-53!42;UBERON:0004572!5.06e-53!42;UBERON:0004573!4.36e-44!33;UBERON:0004571!4.36e-44!33;UBERON:0001981!4.84e-35!60;UBERON:0007500!4.84e-35!60;UBERON:0004537!4.84e-35!60;UBERON:0006965!4.84e-35!60;UBERON:0000055!1.41e-29!69;UBERON:0004872!3.04e-27!84;UBERON:0002049!4.02e-27!79;UBERON:0007798!4.02e-27!79;UBERON:0000947!9.36e-27!21;UBERON:0010191!9.36e-27!21;UBERON:0004535!1.03e-20!110;UBERON:0001009!5.73e-20!113;UBERON:0003914!2.49e-17!118;UBERON:0001310!3.15e-15!4;UBERON:0001134!3.34e-15!61;UBERON:0002036!3.34e-15!61;UBERON:0003082!3.34e-15!61;UBERON:0000415!3.92e-15!4;UBERON:0007240!3.92e-15!4;UBERON:0005742!3.92e-15!4;UBERON:0005734!3.92e-15!4;UBERON:0004664!3.92e-15!4;UBERON:0004663!3.92e-15!4;UBERON:0002385!1.41e-14!63;UBERON:0001015!1.41e-14!63;UBERON:0000383!1.41e-14!63;UBERON:0004290!2.44e-14!70;UBERON:0000914!2.85e-14!83;UBERON:0002329!2.85e-14!83;UBERON:0003077!2.85e-14!83;UBERON:0003059!2.85e-14!83;UBERON:0007282!2.85e-14!83;UBERON:0009618!2.85e-14!83;UBERON:0007285!2.85e-14!83;UBERON:0001621!1.37e-11!3;UBERON:0000486!1.47e-11!82;UBERON:0000490!3.27e-10!138;UBERON:0003915!7.56e-10!9;UBERON:0004700!7.56e-10!9;UBERON:0001917!7.56e-10!9;UBERON:0000992!1.59e-09!13;UBERON:0004237!2.90e-09!10;UBERON:0004695!2.90e-09!10;UBERON:0002111!2.90e-09!10;UBERON:0004178!2.90e-09!10;UBERON:0001529!7.92e-09!2;UBERON:0007204!7.92e-09!2;UBERON:0002119!9.99e-09!4;UBERON:0004531!9.99e-09!4;UBERON:0000025!1.25e-08!194;UBERON:0005396!2.17e-08!2;UBERON:0002118!3.70e-07!5;UBERON:0004532!3.70e-07!5;UBERON:0003498!4.11e-07!5;UBERON:0005985!4.11e-07!5|ontology_enrichment_uberon_v019=UBERON:0001529;3.93e-29;2!UBERON:0007204;3.93e-29;2!UBERON:0001637;2.77e-25;42!UBERON:0003509;2.77e-25;42!UBERON:0004572;2.77e-25;42!UBERON:0004573;3.09e-25;33!UBERON:0004571;3.09e-25;33!UBERON:0004797;2.65e-15;4!UBERON:0000415;2.65e-15;4!UBERON:0007240;2.65e-15;4!UBERON:0005742;2.65e-15;4!UBERON:0005734;2.65e-15;4!UBERON:0004664;2.65e-15;4!UBERON:0004663;2.65e-15;4!UBERON:0001310;4.23e-15;4!UBERON:0000947;3.27e-11;21!UBERON:0010191;3.27e-11;21!UBERON:0007500;5.82e-11;56!UBERON:0001981;5.82e-11;56!UBERON:0004537;5.82e-11;56!UBERON:0003914;2.41e-09;74!UBERON:0000055;9.90e-09;65!UBERON:0005406;2.15e-08;2!UBERON:0005396;2.15e-08;2!UBERON:0002049;2.49e-08;75!UBERON:0007798;2.49e-08;75!UBERON:0010260;3.24e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.57e-33,42;UBERON:0003509,8.57e-33,42;UBERON:0004572,8.57e-33,42;UBERON:0001529,4.55e-29,2;UBERON:0007204,4.55e-29,2;UBERON:0004573,6.12e-27,33;UBERON:0004571,6.12e-27,33;UBERON:0007500,4.32e-23,59;UBERON:0001981,4.32e-23,59;UBERON:0004537,4.32e-23,59;UBERON:0006965,4.32e-23,59;UBERON:0000055,6.54e-20,68;UBERON:0002049,3.10e-17,78;UBERON:0007798,3.10e-17,78;UBERON:0004872,3.89e-16,83;UBERON:0000415,1.92e-15,4;UBERON:0007240,1.92e-15,4;UBERON:0005742,1.92e-15,4;UBERON:0005734,1.92e-15,4;UBERON:0004664,1.92e-15,4;UBERON:0004663,1.92e-15,4;UBERON:0001310,4.23e-15,4;UBERON:0001134,5.84e-14,62;UBERON:0002036,5.84e-14,62;UBERON:0003082,5.84e-14,62;UBERON:0002385,1.67e-13,64;UBERON:0001015,1.67e-13,64;UBERON:0000383,1.67e-13,64;UBERON:0002329,4.20e-12,71;UBERON:0003059,4.20e-12,71;UBERON:0007282,4.20e-12,71;UBERON:0004290,4.20e-12,71;UBERON:0009618,4.20e-12,71;UBERON:0004535,4.83e-12,109;UBERON:0003077,6.33e-12,72;UBERON:0007285,6.33e-12,72;UBERON:0007524,9.43e-12,73;UBERON:0001009,1.08e-11,112;UBERON:0000947,3.36e-11,21;UBERON:0010191,3.36e-11,21;UBERON:0003914,3.81e-11,117;UBERON:0007503,5.94e-11,78;UBERON:0000486,3.00e-10,83;UBERON:0004797,3.17e-09,7;UBERON:0005396,1.73e-08,2;UBERON:0005406,2.00e-08,2;UBERON:0010260,3.24e-07,9;UBERON:0005256,9.99e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0.835979866147242,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.25326102332916,2.91300197789081,1.72101972449288,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20368642781448,0,0.616067160352178,0.532306030317022,0,1.48259375283136,1.43124886741991,0,0.316379424718726,0,0,0,0.318203247925937,1.56989728039846,0,0,0,0.202182481573316,3.17020642346017,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,1.54911749049875,1.40847801266121,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.443565449968902,0.796483835818512,0,0.155262956876259,1.24411862352257,0,0,0.300515217994437,1.90402606084398,1.22061219961398,0,0.429642228169954,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:162954730..162954735,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:162954730..162954735,+ | |||
|id=chr1:162954730..162954735,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.79e-33!32;CL:0000192!3.84e-24!42;CL:0000514!3.84e-24!42;CL:0000187!9.32e-18!54;CL:0000222!4.44e-17!119;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000183!7.19e-16!59;CL:0000393!1.57e-15!60;CL:0000211!1.57e-15!60;CL:0002594!3.15e-15!4;CL:1000306!3.92e-15!4;CL:0002547!3.92e-15!4;CL:0002592!1.37e-11!3;CL:1000413!7.56e-10!9;CL:0002544!1.02e-09!6;CL:0000055!1.33e-09!180;CL:0002539!2.90e-09!10;CL:0002589!7.92e-09!2;CL:0002596!2.17e-08!2;CL:0000220!2.87e-07!246;CL:0002321!3.74e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002589;3.93e-29;2!CL:0000359;7.81e-27;32!CL:0000192;1.28e-16;43!CL:0002581;1.78e-15;1!CL:1000306;2.65e-15;4!CL:0002547;2.65e-15;4!CL:0002594;4.23e-15;4!CL:0000187;7.55e-09;55!CL:0002596;2.15e-08;2!CL:0000393;8.40e-08;61!CL:0000211;8.40e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,4.55e-29,2;CL:0000359,1.25e-27,32;CL:0000192,2.06e-20,43;CL:0000514,2.06e-20,43;CL:0000187,8.03e-16,55;CL:0002581,1.54e-15,1;CL:1000306,1.92e-15,4;CL:0002547,1.92e-15,4;CL:0002594,4.23e-15,4;CL:0000680,5.72e-15,58;CL:0000056,5.72e-15,58;CL:0000355,5.72e-15,58;CL:0000393,3.36e-14,61;CL:0000211,3.36e-14,61;CL:0002596,1.73e-08,2;CL:0000222,8.66e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-16;43!CL:0000355;1.33e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.90e-15!14;DOID:120!3.61e-09!27;DOID:193!2.01e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001529;3.93e-29;2!UBERON:0007204;3.93e-29;2!UBERON:0001637;2.77e-25;42!UBERON:0003509;2.77e-25;42!UBERON:0004572;2.77e-25;42!UBERON:0004573;3.09e-25;33!UBERON:0004571;3.09e-25;33!UBERON:0004797;2.65e-15;4!UBERON:0000415;2.65e-15;4!UBERON:0007240;2.65e-15;4!UBERON:0005742;2.65e-15;4!UBERON:0005734;2.65e-15;4!UBERON:0004664;2.65e-15;4!UBERON:0004663;2.65e-15;4!UBERON:0001310;4.23e-15;4!UBERON:0000947;3.27e-11;21!UBERON:0010191;3.27e-11;21!UBERON:0007500;5.82e-11;56!UBERON:0001981;5.82e-11;56!UBERON:0004537;5.82e-11;56!UBERON:0003914;2.41e-09;74!UBERON:0000055;9.90e-09;65!UBERON:0005406;2.15e-08;2!UBERON:0005396;2.15e-08;2!UBERON:0002049;2.49e-08;75!UBERON:0007798;2.49e-08;75!UBERON:0010260;3.24e-07;9 | |||
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|short_description=p@chr1:162954730..162954735,+ | |||
}} |
Revision as of 01:27, 12 September 2013
Short description: | p@chr1:162954730..162954735, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:162954730..162954735, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 4.55e-29 | 2 |
vascular associated smooth muscle cell | 1.25e-27 | 32 |
smooth muscle cell | 2.06e-20 | 43 |
smooth muscle myoblast | 2.06e-20 | 43 |
muscle cell | 8.03e-16 | 55 |
perirenal preadipocyte | 1.54e-15 | 1 |
fibroblast of tunica adventitia of artery | 1.92e-15 | 4 |
fibroblast of the aortic adventitia | 1.92e-15 | 4 |
smooth muscle cell of the umbilical artery | 4.23e-15 | 4 |
muscle precursor cell | 5.72e-15 | 58 |
myoblast | 5.72e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.72e-15 | 58 |
electrically responsive cell | 3.36e-14 | 61 |
electrically active cell | 3.36e-14 | 61 |
smooth muscle cell of the carotid artery | 1.73e-08 | 2 |
mesodermal cell | 8.66e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.14e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.