FFCP PHASE1:Hg19::chr1:201798251..201798253,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55705|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19425|TSSclassifier=S|UniProt=Q96P70|association_with_transcript=-15bp_to_ENST00000361565_5end|description=CAGE_peak_5_at_IPO9_5end|id=chr1:201798251..201798253,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0002367;2.59e-12;2!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4|ontology_enrichment_celltype_v019_2=CL:0002367,3.24e-12,2;CL:0000346,9.66e-09,3;CL:1000428,9.66e-09,3;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.81e-08!235;DOID:14566!2.18e-08!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005969;2.59e-12;2!UBERON:0003956;2.59e-12;2!UBERON:0000412;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0001801;3.14e-07;14!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.24e-12,2;UBERON:0003956,3.24e-12,2;UBERON:0000412,9.66e-09,3;UBERON:0001992,9.66e-09,3;UBERON:0001801,3.34e-07,14;UBERON:0005085,4.98e-07,31;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,0,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0.412210116953756,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0.132529768321485,0.348581828608555,0.518305275076852,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0.336255431980582,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0.413536052245775,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,1.13841952129715,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19425 | |||
|TSSclassifier=S | |||
|UniProt=Q96P70 | |||
|association_with_transcript=-15bp_to_ENST00000361565_5end | |||
|description=CAGE_peak_5_at_IPO9_5end | |||
|id=chr1:201798251..201798253,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0002367;2.59e-12;2!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,3.24e-12,2;CL:0000346,9.66e-09,3;CL:1000428,9.66e-09,3;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.81e-08!235;DOID:14566!2.18e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;2.59e-12;2!UBERON:0003956;2.59e-12;2!UBERON:0000412;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0001801;3.14e-07;14!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.24e-12,2;UBERON:0003956,3.24e-12,2;UBERON:0000412,9.66e-09,3;UBERON:0001992,9.66e-09,3;UBERON:0001801,3.34e-07,14;UBERON:0005085,4.98e-07,31;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4 | |||
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| |||
|short_description=p5@IPO9 | |||
}} |
Revision as of 02:47, 12 September 2013
Short description: | p5@IPO9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IPO9_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000361565_5end |
EntrezGene: | IPO9 |
HGNC: | 19425 |
UniProt: | Q96P70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 3.24e-12 | 2 |
hair follicle dermal papilla cell | 9.66e-09 | 3 |
stem cell of epidermis | 9.66e-09 | 3 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 3.24e-12 | 2 |
aqueous drainage system | 3.24e-12 | 2 |
dermal papilla | 9.66e-09 | 3 |
papillary layer of dermis | 9.66e-09 | 3 |
anterior segment of eyeball | 3.34e-07 | 14 |
ectodermal placode | 4.98e-07 | 31 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.