FFCP PHASE1:Hg19::chr1:207083310..207083326,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14315|TSSclassifier=S|UniProt=|association_with_transcript=-20bp_to_ENST00000474041_5end|coexpression_cluster_id=C88|description=CAGE_peak_6_at_FAIM3_5end|id=chr1:207083310..207083326,-|ontology_enrichment_celltype=CL:0002077!7.08e-09!33;CL:0000066!7.92e-08!254;CL:0000148!9.34e-07!10;CL:0000541!9.34e-07!10|ontology_enrichment_celltype_v019=CL:0000148;3.64e-23;10!CL:0000147;2.98e-16;14!CL:0002567;2.38e-15;3!CL:0000710;4.62e-11;20!CL:0000075;6.35e-08;27!CL:0002077;3.27e-07;34|ontology_enrichment_celltype_v019_2=CL:0000148,3.67e-23,10;CL:0000541,3.67e-23,10;CL:0000147,3.00e-16,14;CL:0002567,2.34e-15,3;CL:0000710,4.64e-11,20;CL:0000066,1.12e-08,253;CL:0000075,6.36e-08,27;CL:0002077,9.58e-08,34|ontology_enrichment_development_v019=UBERON:0008947;9.08e-14;29!UBERON:0007123;2.29e-08;5|ontology_enrichment_disease=DOID:0050687!5.22e-08!143;DOID:305!3.17e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.29e-09,106;DOID:0050687,6.10e-08,143|ontology_enrichment_uberon=UBERON:0004119!9.16e-14!169;UBERON:0000925!9.16e-14!169;UBERON:0006595!9.16e-14!169;UBERON:0001007!6.52e-13!155;UBERON:0001555!6.52e-13!155;UBERON:0007026!6.52e-13!155;UBERON:0001737!3.22e-12!9;UBERON:0001004!1.47e-10!72;UBERON:0001828!2.26e-08!8;UBERON:0001048!2.90e-08!168;UBERON:0000065!5.34e-08!53;UBERON:0000077!5.77e-08!130;UBERON:0003102!1.63e-07!95;UBERON:0001557!2.17e-07!19;UBERON:0004921!2.95e-07!129;UBERON:0004185!2.95e-07!129;UBERON:0008947!5.17e-07!38;UBERON:0003258!5.17e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;1.29e-39;9!UBERON:0001557;1.29e-39;9!UBERON:0000072;3.72e-11;37!UBERON:0000065;2.72e-09;44!UBERON:0002046;2.29e-08;5!UBERON:0001004;3.45e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.28e-39,9;UBERON:0001557,4.78e-22,19;UBERON:0008947,3.77e-12,38;UBERON:0003258,3.77e-12,38;UBERON:0000072,2.93e-11,47;UBERON:0001007,8.40e-11,145;UBERON:0001555,8.40e-11,145;UBERON:0007026,8.40e-11,145;UBERON:0001041,1.42e-09,87;UBERON:0000065,1.74e-09,54;UBERON:0004119,2.54e-09,160;UBERON:0000925,2.54e-09,160;UBERON:0006595,2.54e-09,160;UBERON:0001004,8.12e-09,74;UBERON:0002046,1.99e-08,5;UBERON:0004117,1.99e-08,5;UBERON:0007689,1.99e-08,5;UBERON:0007123,1.99e-08,5;UBERON:0003091,1.99e-08,5;UBERON:0004921,4.37e-08,118;UBERON:0001048,1.79e-07,160|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.261958150995425,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.516628905878827,1.18800285728205,2.71993622206413,0,0,0,0,0.831192346452549,0.438977620880838,0,0.600952235626387,0.113432183160021,0.179389635688862,0,0,0,0.309157587715317,0,0.37223371266318,0.337552664482532,0.194874010322397,0,0.184099797284599,0,0,0,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,1.30137480043828,3.37169380156203,1.68707720918437,2.20587945464788,3.05031221729369,2.13543557199987,2.42696354688296,2.5508790466295,1.53898862778556,0,0,0,0,0,2.94848165003288,0,0,0,0,0.219500570817251,1.1240175325762,0.603173834469785,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0.283550194484773,0.53735113621709,0,0.766765358330422,0,0,0,0,0,4.19086102328316,16.0435138734477,4.68869788840188,5.13217338068116,17.9948112230816,6.9078903304101,7.71731368102561,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.473107245101804,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0.644566922551274,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.768760269460425,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,1.31178950409327,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0.311039587661807,2.51631383212515,0.179021174675609,0,0.0986434056369336,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000474041_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_FAIM3_5end | |||
|id=chr1:207083310..207083326,- | |||
|ontology_enrichment_celltype=CL:0002077!7.08e-09!33;CL:0000066!7.92e-08!254;CL:0000148!9.34e-07!10;CL:0000541!9.34e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.64e-23;10!CL:0000147;2.98e-16;14!CL:0002567;2.38e-15;3!CL:0000710;4.62e-11;20!CL:0000075;6.35e-08;27!CL:0002077;3.27e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.67e-23,10;CL:0000541,3.67e-23,10;CL:0000147,3.00e-16,14;CL:0002567,2.34e-15,3;CL:0000710,4.64e-11,20;CL:0000066,1.12e-08,253;CL:0000075,6.36e-08,27;CL:0002077,9.58e-08,34 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.08e-14;29!UBERON:0007123;2.29e-08;5 | |||
|ontology_enrichment_disease=DOID:0050687!5.22e-08!143;DOID:305!3.17e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.29e-09,106;DOID:0050687,6.10e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.16e-14!169;UBERON:0000925!9.16e-14!169;UBERON:0006595!9.16e-14!169;UBERON:0001007!6.52e-13!155;UBERON:0001555!6.52e-13!155;UBERON:0007026!6.52e-13!155;UBERON:0001737!3.22e-12!9;UBERON:0001004!1.47e-10!72;UBERON:0001828!2.26e-08!8;UBERON:0001048!2.90e-08!168;UBERON:0000065!5.34e-08!53;UBERON:0000077!5.77e-08!130;UBERON:0003102!1.63e-07!95;UBERON:0001557!2.17e-07!19;UBERON:0004921!2.95e-07!129;UBERON:0004185!2.95e-07!129;UBERON:0008947!5.17e-07!38;UBERON:0003258!5.17e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.29e-39;9!UBERON:0001557;1.29e-39;9!UBERON:0000072;3.72e-11;37!UBERON:0000065;2.72e-09;44!UBERON:0002046;2.29e-08;5!UBERON:0001004;3.45e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.28e-39,9;UBERON:0001557,4.78e-22,19;UBERON:0008947,3.77e-12,38;UBERON:0003258,3.77e-12,38;UBERON:0000072,2.93e-11,47;UBERON:0001007,8.40e-11,145;UBERON:0001555,8.40e-11,145;UBERON:0007026,8.40e-11,145;UBERON:0001041,1.42e-09,87;UBERON:0000065,1.74e-09,54;UBERON:0004119,2.54e-09,160;UBERON:0000925,2.54e-09,160;UBERON:0006595,2.54e-09,160;UBERON:0001004,8.12e-09,74;UBERON:0002046,1.99e-08,5;UBERON:0004117,1.99e-08,5;UBERON:0007689,1.99e-08,5;UBERON:0007123,1.99e-08,5;UBERON:0003091,1.99e-08,5;UBERON:0004921,4.37e-08,118;UBERON:0001048,1.79e-07,160 | |||
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|short_description=p6@FAIM3 | |||
}} |
Revision as of 03:11, 12 September 2013
Short description: | p6@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_FAIM3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -20bp_to_ENST00000474041_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.67e-23 | 10 |
melanoblast | 3.67e-23 | 10 |
pigment cell | 3.00e-16 | 14 |
light melanocyte | 2.34e-15 | 3 |
neurecto-epithelial cell | 4.64e-11 | 20 |
epithelial cell | 1.12e-08 | 253 |
columnar/cuboidal epithelial cell | 6.36e-08 | 27 |
ecto-epithelial cell | 9.58e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.28e-39 | 9 |
upper respiratory tract | 4.78e-22 | 19 |
respiratory primordium | 3.77e-12 | 38 |
endoderm of foregut | 3.77e-12 | 38 |
segment of respiratory tract | 2.93e-11 | 47 |
digestive system | 8.40e-11 | 145 |
digestive tract | 8.40e-11 | 145 |
primitive gut | 8.40e-11 | 145 |
foregut | 1.42e-09 | 87 |
respiratory tract | 1.74e-09 | 54 |
endoderm-derived structure | 2.54e-09 | 160 |
endoderm | 2.54e-09 | 160 |
presumptive endoderm | 2.54e-09 | 160 |
respiratory system | 8.12e-09 | 74 |
thyroid gland | 1.99e-08 | 5 |
pharyngeal pouch | 1.99e-08 | 5 |
thyroid diverticulum | 1.99e-08 | 5 |
pharyngeal pouch 2 | 1.99e-08 | 5 |
thyroid primordium | 1.99e-08 | 5 |
subdivision of digestive tract | 4.37e-08 | 118 |
primordium | 1.79e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.29e-09 | 106 |
cell type cancer | 6.10e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.