FFCP PHASE1:Hg19::chr20:43538756..43538769,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80336|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15797|TSSclassifier=S|UniProt=Q4VY17|association_with_transcript=0bp_to_ENST00000537323_5end|coexpression_cluster_id=C4040|description=CAGE_peak_2_at_PABPC1L_5end|id=chr20:43538756..43538769,+|ontology_enrichment_celltype=CL:0000066!9.59e-08!254|ontology_enrichment_celltype_v019=CL:0000039;6.08e-12;7!CL:0000586;6.08e-12;7!CL:0002322;3.16e-11;5|ontology_enrichment_celltype_v019_2=CL:0000039,3.87e-12,7;CL:0000586,3.87e-12,7;CL:0002322,1.01e-10,5;CL:0000066,1.10e-07,253|ontology_enrichment_development_v019=UBERON:0009497;1.31e-07;13!UBERON:0004161;6.76e-07;11|ontology_enrichment_disease=DOID:162!6.58e-25!235;DOID:14566!9.36e-25!239;DOID:0050687!7.21e-24!143;DOID:305!2.50e-18!106;DOID:0050686!7.23e-09!137;DOID:7!6.09e-07!39|ontology_enrichment_disease_v019=DOID:3119;2.25e-09;14!DOID:3095;7.95e-09;22!DOID:2994;7.95e-09;22!DOID:0050687;9.46e-07;143|ontology_enrichment_disease_v019_2=DOID:0050687,1.53e-20,143;DOID:305,2.00e-18,106;DOID:14566,1.60e-14,239;DOID:162,1.58e-13,235;DOID:3119,2.05e-09,14;DOID:3095,9.71e-09,22;DOID:2994,9.71e-09,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.547497700291537,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0,0.697204805222715,0.853015394924529,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0,0,0.473447805734733,0,0.445641827540694,0,0,0.270803863765016,0.384273959177026,0,0,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0.403213486449465,0,0.434473211648397,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0.472674085820339,1.33037638477538,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,2.51577443545116,2.0078563452417,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,0,0,0.468642863667593,0,0,0,0.23486899728753,0,0.280901613404497,0.204154171254893,0.61417158655884,0.309977343527296,0,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0,0.717558542755448,0,0,0,0.309157587715317,1.03056216018252,0.18611685633159,0.506328996723799,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0.286804595389004,1.09776335516636,3.5783037446801,1.04574548582567,1.24393266018445,1.26160425437814,1.45990943630332,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.614942192715568,0.343135620597051,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.358234090811393,0,0,0.492663237895943,0,0,0,0,0.253991577168676,0,1.17217447210047,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0.87192013766656,0.22001485746285,0.387815147273333,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.179060963239896,1.2329365839288,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.713715955188647,0.946214490203608,0.35142424497814,0.300946099727719,0,0,1.32845119707087,0.553107505625109,0,0,0,0.413536052245775,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0.241718899183244,0.200506470303285,0.184161977871793,0.114814448164607,0.728364672026868,0.655622074797121,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0,0.183138929636687,0.660075999364704,0.574265537996172,0,0,0.773365746336976,0.308097234229289,0,0.137836572484531,0.429680979473094,0.435050081742686,0.596586391912706,0.178064071293475,0.165284915360978,0.960950336825531,1.27612712494584,1.0115778085555,0,1.88887408098384,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0.65589475204663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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15797 | |||
|TSSclassifier=S | |||
|UniProt=Q4VY17 | |||
|association_with_transcript=0bp_to_ENST00000537323_5end | |||
|coexpression_cluster_id=C4040 | |||
|description=CAGE_peak_2_at_PABPC1L_5end | |||
|id=chr20:43538756..43538769,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.59e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.08e-12;7!CL:0000586;6.08e-12;7!CL:0002322;3.16e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.87e-12,7;CL:0000586,3.87e-12,7;CL:0002322,1.01e-10,5;CL:0000066,1.10e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.31e-07;13!UBERON:0004161;6.76e-07;11 | |||
|ontology_enrichment_disease=DOID:162!6.58e-25!235;DOID:14566!9.36e-25!239;DOID:0050687!7.21e-24!143;DOID:305!2.50e-18!106;DOID:0050686!7.23e-09!137;DOID:7!6.09e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.25e-09;14!DOID:3095;7.95e-09;22!DOID:2994;7.95e-09;22!DOID:0050687;9.46e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.53e-20,143;DOID:305,2.00e-18,106;DOID:14566,1.60e-14,239;DOID:162,1.58e-13,235;DOID:3119,2.05e-09,14;DOID:3095,9.71e-09,22;DOID:2994,9.71e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@PABPC1L | |||
}} |
Revision as of 08:37, 12 September 2013
Short description: | p2@PABPC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PABPC1L_5end |
Coexpression cluster: | C4040_testicular_granulocyte_hepatoblastoma_somatostatinoma_smallcell_tubular_extraskeletal |
Association with transcript: | 0bp_to_ENST00000537323_5end |
EntrezGene: | PABPC1L |
HGNC: | 15797 |
UniProt: | Q4VY17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.87e-12 | 7 |
germ cell | 3.87e-12 | 7 |
embryonic stem cell | 1.01e-10 | 5 |
epithelial cell | 1.10e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.53e-20 | 143 |
carcinoma | 2.00e-18 | 106 |
disease of cellular proliferation | 1.60e-14 | 239 |
cancer | 1.58e-13 | 235 |
gastrointestinal system cancer | 2.05e-09 | 14 |
germ cell and embryonal cancer | 9.71e-09 | 22 |
germ cell cancer | 9.71e-09 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.