FFCP PHASE1:Hg19::chr2:162272970..162272981,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10716|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11590|TSSclassifier=S|UniProt=|association_with_transcript=128bp_to_ENST00000463544_5end|coexpression_cluster_id=C1619|description=CAGE_peak_10_at_TBR1_5end|id=chr2:162272970..162272981,+|ontology_enrichment_celltype=CL:0000047!7.23e-11!8;CL:0000540!2.26e-08!6;CL:0000031!2.26e-08!6;CL:0000404!2.26e-08!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,1.38e-08,8|ontology_enrichment_development_v019=UBERON:0006601;3.45e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!1.80e-89!22;UBERON:0001950!4.61e-89!20;UBERON:0000956!1.23e-78!25;UBERON:0000203!1.23e-78!25;UBERON:0001869!4.77e-74!32;UBERON:0001893!1.54e-69!34;UBERON:0002791!3.36e-65!33;UBERON:0002020!3.33e-63!34;UBERON:0003528!3.33e-63!34;UBERON:0002780!3.86e-57!41;UBERON:0001890!3.86e-57!41;UBERON:0006240!3.86e-57!41;UBERON:0005743!7.34e-56!86;UBERON:0003080!1.07e-55!42;UBERON:0001017!4.76e-55!82;UBERON:0000073!4.28e-50!94;UBERON:0001016!4.28e-50!94;UBERON:0000955!1.46e-45!69;UBERON:0006238!1.46e-45!69;UBERON:0001049!8.01e-44!57;UBERON:0005068!8.01e-44!57;UBERON:0006241!8.01e-44!57;UBERON:0007135!8.01e-44!57;UBERON:0002616!3.41e-42!59;UBERON:0003056!1.10e-40!61;UBERON:0003075!7.19e-33!86;UBERON:0007284!7.19e-33!86;UBERON:0000200!3.51e-32!6;UBERON:0002346!3.47e-31!90;UBERON:0000033!1.01e-27!123;UBERON:0002021!1.36e-27!5;UBERON:0001872!2.10e-27!5;UBERON:0000153!3.50e-26!129;UBERON:0007811!3.50e-26!129;UBERON:0004121!1.79e-25!169;UBERON:0007023!1.79e-25!115;UBERON:0000924!9.48e-25!173;UBERON:0006601!9.48e-25!173;UBERON:0001871!6.87e-24!7;UBERON:0002771!3.77e-17!3;UBERON:0001870!1.31e-11!2;UBERON:0000064!9.77e-10!219;UBERON:0000349!1.24e-09!5;UBERON:0000025!1.70e-09!194;UBERON:0002902!7.19e-07!1;UBERON:0009899!7.19e-07!1;UBERON:0002581!7.60e-07!1;UBERON:0003112!9.48e-07!1;UBERON:0000032!9.48e-07!1;UBERON:0005253!9.48e-07!1;UBERON:0003128!9.48e-07!1;UBERON:0002241!9.48e-07!1;UBERON:0001703!9.48e-07!1;UBERON:0004761!9.48e-07!1;UBERON:0009617!9.48e-07!1|ontology_enrichment_uberon_v019=UBERON:0001950;4.85e-107;20!UBERON:0002619;1.87e-97;22!UBERON:0000956;7.74e-86;25!UBERON:0000203;7.74e-86;25!UBERON:0001869;4.07e-65;32!UBERON:0001893;3.09e-61;34!UBERON:0002791;1.62e-57;32!UBERON:0003528;5.32e-54;34!UBERON:0002020;5.32e-54;34!UBERON:0000200;1.71e-42;6!UBERON:0002780;2.00e-38;41!UBERON:0001890;2.00e-38;41!UBERON:0002021;2.39e-36;5!UBERON:0001872;5.32e-36;5!UBERON:0000073;2.90e-24;53!UBERON:0002616;2.90e-24;53!UBERON:0001870;7.44e-22;3!UBERON:0000955;2.88e-21;68!UBERON:0001017;4.96e-21;75!UBERON:0001871;8.98e-17;6!UBERON:0001016;3.62e-16;83!UBERON:0002702;2.08e-15;2!UBERON:0002771;2.41e-15;2!UBERON:0002581;1.27e-08;1!UBERON:0002902;1.27e-08;1!UBERON:0009899;1.27e-08;1!UBERON:0003112;1.98e-08;1!UBERON:0011158;1.98e-08;1!UBERON:0007190;1.98e-08;1!UBERON:0003128;1.98e-08;1!UBERON:0001703;1.98e-08;1!UBERON:0002241;1.98e-08;1!UBERON:0002022;3.40e-08;1!UBERON:0011216;5.93e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.67e-107,20;UBERON:0002619,1.45e-97,22;UBERON:0000956,6.19e-86,25;UBERON:0000203,6.19e-86,25;UBERON:0001869,9.86e-75,32;UBERON:0001893,2.88e-70,34;UBERON:0002791,5.15e-67,32;UBERON:0003528,5.36e-63,34;UBERON:0002020,5.36e-63,34;UBERON:0002780,5.57e-58,41;UBERON:0001890,5.57e-58,41;UBERON:0003080,5.57e-58,41;UBERON:0006240,5.57e-58,41;UBERON:0001017,1.09e-49,81;UBERON:0000955,1.39e-45,68;UBERON:0006238,1.39e-45,68;UBERON:0001016,2.01e-44,89;UBERON:0000073,2.54e-44,53;UBERON:0002616,2.54e-44,53;UBERON:0000200,1.72e-42,6;UBERON:0001049,8.38e-42,56;UBERON:0005068,8.38e-42,56;UBERON:0006241,8.38e-42,56;UBERON:0007135,8.38e-42,56;UBERON:0003056,3.79e-38,61;UBERON:0002021,2.40e-36,5;UBERON:0001872,4.29e-36,5;UBERON:0003075,1.35e-27,82;UBERON:0007284,1.35e-27,82;UBERON:0002346,3.67e-26,86;UBERON:0001870,6.68e-22,3;UBERON:0004121,1.74e-21,171;UBERON:0000924,1.74e-21,171;UBERON:0006601,1.74e-21,171;UBERON:0010371,4.64e-21,104;UBERON:0011216,1.09e-18,223;UBERON:0010314,8.24e-18,132;UBERON:0001871,8.81e-17,6;UBERON:0007023,9.53e-17,114;UBERON:0002771,1.94e-15,2;UBERON:0002702,1.94e-15,2;UBERON:0000025,8.47e-10,192;UBERON:0002902,1.18e-08,1;UBERON:0009899,1.18e-08,1;UBERON:0002581,1.27e-08,1;UBERON:0003112,1.71e-08,1;UBERON:0011158,1.71e-08,1;UBERON:0003128,1.71e-08,1;UBERON:0001703,1.71e-08,1;UBERON:0002241,1.71e-08,1;UBERON:0004761,1.71e-08,1;UBERON:0009617,1.71e-08,1;UBERON:0007190,2.64e-08,1;UBERON:0002022,3.53e-08,1;UBERON:0004111,4.01e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=128bp_to_ENST00000463544_5end | |||
|coexpression_cluster_id=C1619 | |||
|description=CAGE_peak_10_at_TBR1_5end | |||
|id=chr2:162272970..162272981,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.23e-11!8;CL:0000540!2.26e-08!6;CL:0000031!2.26e-08!6;CL:0000404!2.26e-08!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.38e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.45e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.80e-89!22;UBERON:0001950!4.61e-89!20;UBERON:0000956!1.23e-78!25;UBERON:0000203!1.23e-78!25;UBERON:0001869!4.77e-74!32;UBERON:0001893!1.54e-69!34;UBERON:0002791!3.36e-65!33;UBERON:0002020!3.33e-63!34;UBERON:0003528!3.33e-63!34;UBERON:0002780!3.86e-57!41;UBERON:0001890!3.86e-57!41;UBERON:0006240!3.86e-57!41;UBERON:0005743!7.34e-56!86;UBERON:0003080!1.07e-55!42;UBERON:0001017!4.76e-55!82;UBERON:0000073!4.28e-50!94;UBERON:0001016!4.28e-50!94;UBERON:0000955!1.46e-45!69;UBERON:0006238!1.46e-45!69;UBERON:0001049!8.01e-44!57;UBERON:0005068!8.01e-44!57;UBERON:0006241!8.01e-44!57;UBERON:0007135!8.01e-44!57;UBERON:0002616!3.41e-42!59;UBERON:0003056!1.10e-40!61;UBERON:0003075!7.19e-33!86;UBERON:0007284!7.19e-33!86;UBERON:0000200!3.51e-32!6;UBERON:0002346!3.47e-31!90;UBERON:0000033!1.01e-27!123;UBERON:0002021!1.36e-27!5;UBERON:0001872!2.10e-27!5;UBERON:0000153!3.50e-26!129;UBERON:0007811!3.50e-26!129;UBERON:0004121!1.79e-25!169;UBERON:0007023!1.79e-25!115;UBERON:0000924!9.48e-25!173;UBERON:0006601!9.48e-25!173;UBERON:0001871!6.87e-24!7;UBERON:0002771!3.77e-17!3;UBERON:0001870!1.31e-11!2;UBERON:0000064!9.77e-10!219;UBERON:0000349!1.24e-09!5;UBERON:0000025!1.70e-09!194;UBERON:0002902!7.19e-07!1;UBERON:0009899!7.19e-07!1;UBERON:0002581!7.60e-07!1;UBERON:0003112!9.48e-07!1;UBERON:0000032!9.48e-07!1;UBERON:0005253!9.48e-07!1;UBERON:0003128!9.48e-07!1;UBERON:0002241!9.48e-07!1;UBERON:0001703!9.48e-07!1;UBERON:0004761!9.48e-07!1;UBERON:0009617!9.48e-07!1 | |||
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|short_description=p10@TBR1 | |||
}} |
Revision as of 14:21, 12 September 2013
Short description: | p10@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TBR1_5end |
Coexpression cluster: | C1619_medulloblastoma_occipital_duodenum_Neural_parietal_temporal_Neurons |
Association with transcript: | 128bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.38e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.