FFCP PHASE1:Hg19::chr2:162273032..162273042,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10716|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11590|TSSclassifier=W|UniProt=|association_with_transcript=190bp_to_ENST00000463544_5end|coexpression_cluster_id=C3|description=CAGE_peak_13_at_TBR1_5end|id=chr2:162273032..162273042,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.03e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!1.36e-97!22;UBERON:0001950!4.86e-97!20;UBERON:0000956!1.49e-94!25;UBERON:0000203!1.49e-94!25;UBERON:0001893!1.07e-90!34;UBERON:0001869!1.03e-88!32;UBERON:0002791!1.50e-85!33;UBERON:0002020!5.56e-76!34;UBERON:0003528!5.56e-76!34;UBERON:0002780!9.16e-75!41;UBERON:0001890!9.16e-75!41;UBERON:0006240!9.16e-75!41;UBERON:0003080!6.53e-73!42;UBERON:0000955!2.44e-54!69;UBERON:0006238!2.44e-54!69;UBERON:0001049!8.88e-53!57;UBERON:0005068!8.88e-53!57;UBERON:0006241!8.88e-53!57;UBERON:0007135!8.88e-53!57;UBERON:0001017!1.70e-52!82;UBERON:0002616!7.47e-51!59;UBERON:0005743!7.40e-50!86;UBERON:0003056!4.72e-49!61;UBERON:0000073!1.03e-44!94;UBERON:0001016!1.03e-44!94;UBERON:0003075!1.40e-36!86;UBERON:0007284!1.40e-36!86;UBERON:0000200!2.88e-35!6;UBERON:0002346!9.54e-35!90;UBERON:0000033!5.95e-31!123;UBERON:0002021!4.44e-30!5;UBERON:0001872!1.44e-29!5;UBERON:0000153!2.80e-29!129;UBERON:0007811!2.80e-29!129;UBERON:0001871!2.07e-25!7;UBERON:0007023!2.68e-24!115;UBERON:0004121!9.59e-23!169;UBERON:0000924!4.26e-22!173;UBERON:0006601!4.26e-22!173;UBERON:0002771!2.50e-18!3;UBERON:0001870!5.61e-13!2;UBERON:0000025!3.64e-12!194;UBERON:0000349!1.53e-10!5;UBERON:0000064!3.45e-09!219;UBERON:0004111!7.85e-09!241;UBERON:0002902!1.65e-07!1;UBERON:0009899!1.65e-07!1;UBERON:0000477!1.74e-07!286;UBERON:0002581!1.86e-07!1;UBERON:0002702!2.23e-07!1;UBERON:0007190!2.67e-07!1;UBERON:0002022!3.20e-07!1;UBERON:0003112!4.85e-07!1;UBERON:0000032!4.85e-07!1;UBERON:0005253!4.85e-07!1;UBERON:0003128!4.85e-07!1;UBERON:0002241!4.85e-07!1;UBERON:0001703!4.85e-07!1;UBERON:0004761!4.85e-07!1;UBERON:0009617!4.85e-07!1;UBERON:0001882!5.14e-07!1;UBERON:0005403!5.14e-07!1;UBERON:0000475!8.29e-07!365|ontology_enrichment_uberon_v019=UBERON:0001950;7.10e-119;20!UBERON:0002619;2.30e-108;22!UBERON:0000956;1.26e-95;25!UBERON:0000203;1.26e-95;25!UBERON:0001869;9.08e-73;32!UBERON:0001893;1.11e-71;34!UBERON:0002791;3.07e-63;32!UBERON:0003528;2.04e-60;34!UBERON:0002020;2.04e-60;34!UBERON:0000200;3.09e-59;6!UBERON:0001872;2.26e-49;5!UBERON:0002780;2.59e-42;41!UBERON:0001890;2.59e-42;41!UBERON:0002021;4.89e-33;5!UBERON:0001870;2.88e-30;3!UBERON:0000073;1.69e-27;53!UBERON:0002616;1.69e-27;53!UBERON:0000955;1.24e-23;68!UBERON:0002771;6.05e-21;2!UBERON:0002702;1.11e-20;2!UBERON:0001017;1.93e-20;75!UBERON:0001016;3.29e-14;83!UBERON:0001871;1.85e-13;6!UBERON:0002581;1.18e-11;1!UBERON:0002902;1.18e-11;1!UBERON:0009899;1.18e-11;1!UBERON:0002022;2.18e-11;1!UBERON:0007190;2.18e-11;1!UBERON:0007023;4.65e-08;114!UBERON:0011216;3.24e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.01e-119,20;UBERON:0002619,2.86e-108,22;UBERON:0000956,1.52e-95,25;UBERON:0000203,1.52e-95,25;UBERON:0001869,1.19e-84,32;UBERON:0001893,1.09e-79,34;UBERON:0002791,7.70e-75,32;UBERON:0003528,1.92e-70,34;UBERON:0002020,1.92e-70,34;UBERON:0002780,4.80e-66,41;UBERON:0001890,4.80e-66,41;UBERON:0003080,4.80e-66,41;UBERON:0006240,4.80e-66,41;UBERON:0000200,3.43e-59,6;UBERON:0000073,7.13e-51,53;UBERON:0002616,7.13e-51,53;UBERON:0001872,2.05e-49,5;UBERON:0000955,7.82e-49,68;UBERON:0006238,7.82e-49,68;UBERON:0001049,4.47e-48,56;UBERON:0005068,4.47e-48,56;UBERON:0006241,4.47e-48,56;UBERON:0007135,4.47e-48,56;UBERON:0003056,5.14e-44,61;UBERON:0001017,8.24e-41,81;UBERON:0001016,1.40e-36,89;UBERON:0002021,3.53e-33,5;UBERON:0003075,2.73e-32,82;UBERON:0007284,2.73e-32,82;UBERON:0002346,1.07e-30,86;UBERON:0001870,2.74e-30,3;UBERON:0010371,5.05e-25,104;UBERON:0007023,6.21e-23,114;UBERON:0002771,7.05e-21,2;UBERON:0002702,8.62e-21,2;UBERON:0010314,3.08e-19,132;UBERON:0004121,3.81e-18,171;UBERON:0000924,3.81e-18,171;UBERON:0006601,3.81e-18,171;UBERON:0001871,2.24e-13,6;UBERON:0011216,2.76e-13,223;UBERON:0000025,1.82e-12,192;UBERON:0002902,1.06e-11,1;UBERON:0009899,1.06e-11,1;UBERON:0002581,1.31e-11,1;UBERON:0007190,2.42e-11,1;UBERON:0002022,3.28e-11,1;UBERON:0004111,1.85e-09,240;UBERON:0000483,7.64e-07,306;UBERON:0000119,9.46e-07,309|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=190bp_to_ENST00000463544_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_TBR1_5end | |||
|id=chr2:162273032..162273042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.03e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@TBR1 | |||
}} |
Revision as of 14:21, 12 September 2013
Short description: | p13@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 190bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.