FFCP PHASE1:Mm9::chr10:114799559..114799584,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67226|HGNC=|UniProt=Q91W52|association_with_transcript=-241bp_to_ENSMUST00000092170,NM_133683,uc007hbd.1_5end|description=CAGE_peak_3_at_Tmem19_5end|id=chr10:114799559..114799584,-|ontology_enrichment_celltype=CL:0000117!1.54e-11!23;CL:0000337!1.54e-11!23;CL:0000540!8.89e-09!33;CL:0000047!8.89e-09!33;CL:0000031!8.89e-09!33;CL:0000404!8.89e-09!33;CL:0000221!1.44e-08!44;CL:0000133!1.44e-08!44;CL:0002319!4.36e-08!43;CL:0000393!2.10e-07!39;CL:0000211!2.10e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-13,23;CL:0000337,1.40e-13,23;CL:0000540,7.64e-10,33;CL:0000047,7.64e-10,33;CL:0000031,7.64e-10,33;CL:0000404,7.64e-10,33;CL:0000221,6.41e-09,44;CL:0000133,6.41e-09,44;CL:0000393,6.54e-09,39;CL:0000211,6.54e-09,39;CL:0002319,2.37e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.40e-22!73;UBERON:0005743!2.40e-22!73;UBERON:0000073!1.23e-21!75;UBERON:0001016!1.23e-21!75;UBERON:0001049!3.78e-21!52;UBERON:0005068!3.78e-21!52;UBERON:0006241!3.78e-21!52;UBERON:0007135!3.78e-21!52;UBERON:0000033!6.17e-21!63;UBERON:0000955!6.57e-20!50;UBERON:0006238!6.57e-20!50;UBERON:0002616!1.39e-19!49;UBERON:0002346!5.32e-19!71;UBERON:0003075!5.32e-19!71;UBERON:0007284!5.32e-19!71;UBERON:0003080!2.51e-18!40;UBERON:0004121!3.94e-18!102;UBERON:0000924!3.94e-18!102;UBERON:0006601!3.94e-18!102;UBERON:0002780!7.32e-18!39;UBERON:0001890!7.32e-18!39;UBERON:0006240!7.32e-18!39;UBERON:0003056!1.72e-17!49;UBERON:0002020!2.06e-17!34;UBERON:0007811!6.30e-15!86;UBERON:0002791!7.72e-15!29;UBERON:0003528!7.72e-15!29;UBERON:0001893!7.72e-15!29;UBERON:0000153!2.45e-13!94;UBERON:0004111!1.87e-11!122;UBERON:0000025!8.81e-11!114;UBERON:0000956!2.00e-10!21;UBERON:0001869!2.00e-10!21;UBERON:0000203!2.00e-10!21;UBERON:0002619!8.18e-10!17;UBERON:0000477!1.12e-07!154;UBERON:0002021!2.21e-07!10;UBERON:0000411!2.21e-07!10;UBERON:0001950!2.21e-07!10;UBERON:0000483!3.29e-07!181;UBERON:0000119!5.54e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.80e-27,54;UBERON:0001017,2.83e-26,73;UBERON:0001049,8.45e-26,52;UBERON:0005068,8.45e-26,52;UBERON:0006241,8.45e-26,52;UBERON:0007135,8.45e-26,52;UBERON:0001016,7.32e-25,75;UBERON:0002346,6.96e-24,64;UBERON:0003075,6.96e-24,64;UBERON:0007284,6.96e-24,64;UBERON:0000955,1.87e-22,47;UBERON:0006238,1.87e-22,47;UBERON:0002616,4.72e-22,46;UBERON:0003080,1.55e-21,40;UBERON:0004121,2.42e-21,95;UBERON:0000924,2.42e-21,95;UBERON:0006601,2.42e-21,95;UBERON:0002780,5.96e-21,39;UBERON:0001890,5.96e-21,39;UBERON:0006240,5.96e-21,39;UBERON:0010371,1.07e-20,73;UBERON:0010314,1.49e-20,92;UBERON:0002020,2.50e-20,34;UBERON:0003056,3.02e-20,49;UBERON:0003528,4.27e-17,29;UBERON:0002791,4.27e-17,29;UBERON:0001893,4.27e-17,29;UBERON:0004111,2.42e-14,122;UBERON:0000025,3.64e-13,114;UBERON:0000956,1.37e-11,21;UBERON:0001869,1.37e-11,21;UBERON:0000203,1.37e-11,21;UBERON:0002619,2.51e-11,17;UBERON:0002021,6.48e-09,10;UBERON:0000411,6.48e-09,10;UBERON:0001950,6.48e-09,10;UBERON:0000483,2.93e-08,174;UBERON:0000119,7.32e-08,176;UBERON:0002420,8.00e-07,8;UBERON:0007245,8.00e-07,8;UBERON:0010009,8.00e-07,8;UBERON:0010011,8.00e-07,8;UBERON:0000454,8.00e-07,8|phase1_expression=4.00372117761985,0.697950815278722,0,0.60492842261366,0.500895729946347,1.00727563147134,0.467225281191051,0.516493293766305,0.140788722151667,0.234064526321993,0.68487187290202,0.717949430958028,1.02720437958723,0.699363219351979,0,0.404950534779652,0.699561878128147,0.946386496074713,1.23402990245165,0.42438965179803,0.680346321208558,0.496454756004426,2.08959831311148,0.319984845586813,1.14704640533585,0,1.29228598847722,0.646413698057667,0.190023419456374,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0.837063261473815,0,1.57057123192139,0,1.36609096991689,0.485510353031154,0,0.304130793658544,1.10128051297009,0,1.30815093828268,0.878744730937887,2.72201858703997,0.839918529752175,5.75010257459886,1.67782606057736,0,1.34437519656986,1.28629718017973,1.71920063963254,0.515672092277442,3.03474691289397,5.28990979272033,2.53532561402472,0.338844532069132,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,0.599200221036809,1.15265491596466,2.17748185847803,1.21505344498522,0.841299845405528,3.99911378165325,2.42955395046775,1.34739879136449,2.39613677545591,3.67687514644008,3.30347642998166,3.31987079021488,1.22885226604995,2.50583946687368,4.11694396210843,5.73004707612436,3.07101298901519,2.8138130501584,2.75036845998258,2.65165726926301,1.85083185038834,1.86399445825301,0.832988126665025,0.604572480854284,0.289864488701678,0,0,0.539703191637817,0.649776417447669,1.34408066129201,2.10666630197628,1.70430322578058,0.779358013808606,1.06001872353102,3.23939865486365,0,0,0,0.649473123033642,1.26679932737549,0,0.91347103775248,0.258937883647172,1.03909497345377,0.867426633830679,0.608930956624282,0.922461989024234,0.60289056221049,1.17588707135705,0.753999547978053,0.247194967734374,0.144599356919912,0.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| ||
|EntrezGene=67226 | |||
|HGNC= | |||
|UniProt=Q91W52 | |||
|association_with_transcript=-241bp_to_ENSMUST00000092170,NM_133683,uc007hbd.1_5end | |||
|description=CAGE_peak_3_at_Tmem19_5end | |||
|id=chr10:114799559..114799584,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-11!23;CL:0000337!1.54e-11!23;CL:0000540!8.89e-09!33;CL:0000047!8.89e-09!33;CL:0000031!8.89e-09!33;CL:0000404!8.89e-09!33;CL:0000221!1.44e-08!44;CL:0000133!1.44e-08!44;CL:0002319!4.36e-08!43;CL:0000393!2.10e-07!39;CL:0000211!2.10e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-13,23;CL:0000337,1.40e-13,23;CL:0000540,7.64e-10,33;CL:0000047,7.64e-10,33;CL:0000031,7.64e-10,33;CL:0000404,7.64e-10,33;CL:0000221,6.41e-09,44;CL:0000133,6.41e-09,44;CL:0000393,6.54e-09,39;CL:0000211,6.54e-09,39;CL:0002319,2.37e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-22!73;UBERON:0005743!2.40e-22!73;UBERON:0000073!1.23e-21!75;UBERON:0001016!1.23e-21!75;UBERON:0001049!3.78e-21!52;UBERON:0005068!3.78e-21!52;UBERON:0006241!3.78e-21!52;UBERON:0007135!3.78e-21!52;UBERON:0000033!6.17e-21!63;UBERON:0000955!6.57e-20!50;UBERON:0006238!6.57e-20!50;UBERON:0002616!1.39e-19!49;UBERON:0002346!5.32e-19!71;UBERON:0003075!5.32e-19!71;UBERON:0007284!5.32e-19!71;UBERON:0003080!2.51e-18!40;UBERON:0004121!3.94e-18!102;UBERON:0000924!3.94e-18!102;UBERON:0006601!3.94e-18!102;UBERON:0002780!7.32e-18!39;UBERON:0001890!7.32e-18!39;UBERON:0006240!7.32e-18!39;UBERON:0003056!1.72e-17!49;UBERON:0002020!2.06e-17!34;UBERON:0007811!6.30e-15!86;UBERON:0002791!7.72e-15!29;UBERON:0003528!7.72e-15!29;UBERON:0001893!7.72e-15!29;UBERON:0000153!2.45e-13!94;UBERON:0004111!1.87e-11!122;UBERON:0000025!8.81e-11!114;UBERON:0000956!2.00e-10!21;UBERON:0001869!2.00e-10!21;UBERON:0000203!2.00e-10!21;UBERON:0002619!8.18e-10!17;UBERON:0000477!1.12e-07!154;UBERON:0002021!2.21e-07!10;UBERON:0000411!2.21e-07!10;UBERON:0001950!2.21e-07!10;UBERON:0000483!3.29e-07!181;UBERON:0000119!5.54e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.80e-27,54;UBERON:0001017,2.83e-26,73;UBERON:0001049,8.45e-26,52;UBERON:0005068,8.45e-26,52;UBERON:0006241,8.45e-26,52;UBERON:0007135,8.45e-26,52;UBERON:0001016,7.32e-25,75;UBERON:0002346,6.96e-24,64;UBERON:0003075,6.96e-24,64;UBERON:0007284,6.96e-24,64;UBERON:0000955,1.87e-22,47;UBERON:0006238,1.87e-22,47;UBERON:0002616,4.72e-22,46;UBERON:0003080,1.55e-21,40;UBERON:0004121,2.42e-21,95;UBERON:0000924,2.42e-21,95;UBERON:0006601,2.42e-21,95;UBERON:0002780,5.96e-21,39;UBERON:0001890,5.96e-21,39;UBERON:0006240,5.96e-21,39;UBERON:0010371,1.07e-20,73;UBERON:0010314,1.49e-20,92;UBERON:0002020,2.50e-20,34;UBERON:0003056,3.02e-20,49;UBERON:0003528,4.27e-17,29;UBERON:0002791,4.27e-17,29;UBERON:0001893,4.27e-17,29;UBERON:0004111,2.42e-14,122;UBERON:0000025,3.64e-13,114;UBERON:0000956,1.37e-11,21;UBERON:0001869,1.37e-11,21;UBERON:0000203,1.37e-11,21;UBERON:0002619,2.51e-11,17;UBERON:0002021,6.48e-09,10;UBERON:0000411,6.48e-09,10;UBERON:0001950,6.48e-09,10;UBERON:0000483,2.93e-08,174;UBERON:0000119,7.32e-08,176;UBERON:0002420,8.00e-07,8;UBERON:0007245,8.00e-07,8;UBERON:0010009,8.00e-07,8;UBERON:0010011,8.00e-07,8;UBERON:0000454,8.00e-07,8 | |||
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| |||
|short_description=p3@Tmem19 | |||
}} |
Revision as of 15:45, 12 September 2013
Short description: | p3@Tmem19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem19_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_ENSMUST00000092170, NM_133683, uc007hbd.1_5end |
EntrezGene: | Tmem19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-13 | 23 |
neuron | 7.64e-10 | 33 |
neuronal stem cell | 7.64e-10 | 33 |
neuroblast | 7.64e-10 | 33 |
electrically signaling cell | 7.64e-10 | 33 |
ectodermal cell | 6.41e-09 | 44 |
neurectodermal cell | 6.41e-09 | 44 |
electrically responsive cell | 6.54e-09 | 39 |
electrically active cell | 6.54e-09 | 39 |
neural cell | 2.37e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.