FFCP PHASE1:Hg19::chr2:200323212..200323223,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23314|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21637|TSSclassifier=S|UniProt=C9JR56|association_with_transcript=244bp_to_ENST00000443023_5end|description=CAGE_peak_8_at_SATB2_5end|id=chr2:200323212..200323223,-|ontology_enrichment_celltype=CL:0002620!2.75e-09!23;CL:0000057!3.24e-09!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.05e-15!143;DOID:305!4.81e-12!106;DOID:14566!2.27e-11!239;DOID:162!4.62e-11!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!6.60e-16!20;UBERON:0002619!1.96e-15!22;UBERON:0000956!1.12e-14!25;UBERON:0000203!1.12e-14!25;UBERON:0001869!4.00e-12!32;UBERON:0001893!1.66e-11!34;UBERON:0002020!5.52e-11!34;UBERON:0003528!5.52e-11!34;UBERON:0002791!8.89e-11!33;UBERON:0002097!4.72e-09!40;UBERON:0002780!6.11e-08!41;UBERON:0001890!6.11e-08!41;UBERON:0006240!6.11e-08!41;UBERON:0003080!1.53e-07!42;UBERON:0003102!1.77e-07!95;UBERON:0000475!3.19e-07!365;UBERON:0000062!4.61e-07!511;UBERON:0001049!4.92e-07!57;UBERON:0005068!4.92e-07!57;UBERON:0006241!4.92e-07!57;UBERON:0007135!4.92e-07!57;UBERON:0002199!5.23e-07!45;UBERON:0002416!5.23e-07!45;UBERON:0000200!5.78e-07!6|ontology_enrichment_uberon_v019=UBERON:0001950;1.11e-34;20!UBERON:0002619;2.27e-31;22!UBERON:0000956;2.31e-27;25!UBERON:0000203;2.31e-27;25!UBERON:0000200;1.12e-24;6!UBERON:0001869;5.14e-21;32!UBERON:0001893;5.26e-20;34!UBERON:0002791;2.17e-18;32!UBERON:0003528;8.39e-16;34!UBERON:0002020;8.39e-16;34!UBERON:0001870;4.23e-13;3!UBERON:0002021;4.36e-13;5!UBERON:0002780;3.28e-12;41!UBERON:0001890;3.28e-12;41!UBERON:0002702;1.16e-09;2!UBERON:0002771;1.62e-09;2!UBERON:0000073;1.31e-08;53!UBERON:0002616;1.31e-08;53!UBERON:0001872;5.85e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.18e-35,20;UBERON:0002619,1.90e-31,22;UBERON:0000956,1.99e-27,25;UBERON:0000203,1.99e-27,25;UBERON:0000200,1.07e-24,6;UBERON:0001869,3.30e-24,32;UBERON:0001893,1.29e-22,34;UBERON:0002791,6.72e-21,32;UBERON:0003528,1.63e-19,34;UBERON:0002020,1.63e-19,34;UBERON:0002780,3.06e-18,41;UBERON:0001890,3.06e-18,41;UBERON:0003080,3.06e-18,41;UBERON:0006240,3.06e-18,41;UBERON:0000073,2.24e-15,53;UBERON:0002616,2.24e-15,53;UBERON:0001049,2.30e-14,56;UBERON:0005068,2.30e-14,56;UBERON:0006241,2.30e-14,56;UBERON:0007135,2.30e-14,56;UBERON:0001870,2.74e-13,3;UBERON:0002021,5.65e-13,5;UBERON:0003056,5.68e-13,61;UBERON:0000955,1.61e-12,68;UBERON:0006238,1.61e-12,68;UBERON:0003075,4.91e-10,82;UBERON:0007284,4.91e-10,82;UBERON:0001017,6.12e-10,81;UBERON:0002702,1.15e-09,2;UBERON:0002771,1.41e-09,2;UBERON:0002346,2.14e-09,86;UBERON:0001016,1.36e-08,89;UBERON:0010371,4.09e-08,104;UBERON:0001872,6.62e-08,5;UBERON:0011216,8.67e-08,223|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0.624320153660641,0.570471821544449,0.298897361103602,0.23486899728753,0,0.280901613404497,0.204154171254893,0.245668634623536,0.619954687054593,1.18800285728205,0.741800787835671,0,1.43723628363248,0.336672227908132,0.250237039743928,1.6623846929051,1.75591048352335,0.612975591598039,0.901428353439581,0,0.538168907066586,0.213557388818567,0.211931901159562,0.600182192168805,0.412210116953756,1.28820270022815,0.37223371266318,0.506328996723799,0.292311015483596,1.26216887122057,0.276149695926898,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0,0,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,1.53512174720011,0.321707842287215,0,0,0,0.328508624055237,0.519254429183621,0,0.120859449591622,0,1.10497186723076,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.190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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21637 | |||
|TSSclassifier=S | |||
|UniProt=C9JR56 | |||
|association_with_transcript=244bp_to_ENST00000443023_5end | |||
|description=CAGE_peak_8_at_SATB2_5end | |||
|id=chr2:200323212..200323223,- | |||
|ontology_enrichment_celltype=CL:0002620!2.75e-09!23;CL:0000057!3.24e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.05e-15!143;DOID:305!4.81e-12!106;DOID:14566!2.27e-11!239;DOID:162!4.62e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!6.60e-16!20;UBERON:0002619!1.96e-15!22;UBERON:0000956!1.12e-14!25;UBERON:0000203!1.12e-14!25;UBERON:0001869!4.00e-12!32;UBERON:0001893!1.66e-11!34;UBERON:0002020!5.52e-11!34;UBERON:0003528!5.52e-11!34;UBERON:0002791!8.89e-11!33;UBERON:0002097!4.72e-09!40;UBERON:0002780!6.11e-08!41;UBERON:0001890!6.11e-08!41;UBERON:0006240!6.11e-08!41;UBERON:0003080!1.53e-07!42;UBERON:0003102!1.77e-07!95;UBERON:0000475!3.19e-07!365;UBERON:0000062!4.61e-07!511;UBERON:0001049!4.92e-07!57;UBERON:0005068!4.92e-07!57;UBERON:0006241!4.92e-07!57;UBERON:0007135!4.92e-07!57;UBERON:0002199!5.23e-07!45;UBERON:0002416!5.23e-07!45;UBERON:0000200!5.78e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.11e-34;20!UBERON:0002619;2.27e-31;22!UBERON:0000956;2.31e-27;25!UBERON:0000203;2.31e-27;25!UBERON:0000200;1.12e-24;6!UBERON:0001869;5.14e-21;32!UBERON:0001893;5.26e-20;34!UBERON:0002791;2.17e-18;32!UBERON:0003528;8.39e-16;34!UBERON:0002020;8.39e-16;34!UBERON:0001870;4.23e-13;3!UBERON:0002021;4.36e-13;5!UBERON:0002780;3.28e-12;41!UBERON:0001890;3.28e-12;41!UBERON:0002702;1.16e-09;2!UBERON:0002771;1.62e-09;2!UBERON:0000073;1.31e-08;53!UBERON:0002616;1.31e-08;53!UBERON:0001872;5.85e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.18e-35,20;UBERON:0002619,1.90e-31,22;UBERON:0000956,1.99e-27,25;UBERON:0000203,1.99e-27,25;UBERON:0000200,1.07e-24,6;UBERON:0001869,3.30e-24,32;UBERON:0001893,1.29e-22,34;UBERON:0002791,6.72e-21,32;UBERON:0003528,1.63e-19,34;UBERON:0002020,1.63e-19,34;UBERON:0002780,3.06e-18,41;UBERON:0001890,3.06e-18,41;UBERON:0003080,3.06e-18,41;UBERON:0006240,3.06e-18,41;UBERON:0000073,2.24e-15,53;UBERON:0002616,2.24e-15,53;UBERON:0001049,2.30e-14,56;UBERON:0005068,2.30e-14,56;UBERON:0006241,2.30e-14,56;UBERON:0007135,2.30e-14,56;UBERON:0001870,2.74e-13,3;UBERON:0002021,5.65e-13,5;UBERON:0003056,5.68e-13,61;UBERON:0000955,1.61e-12,68;UBERON:0006238,1.61e-12,68;UBERON:0003075,4.91e-10,82;UBERON:0007284,4.91e-10,82;UBERON:0001017,6.12e-10,81;UBERON:0002702,1.15e-09,2;UBERON:0002771,1.41e-09,2;UBERON:0002346,2.14e-09,86;UBERON:0001016,1.36e-08,89;UBERON:0010371,4.09e-08,104;UBERON:0001872,6.62e-08,5;UBERON:0011216,8.67e-08,223 | |||
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| |||
|short_description=p8@SATB2 | |||
}} |
Revision as of 15:55, 12 September 2013
Short description: | p8@SATB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SATB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 244bp_to_ENST00000443023_5end |
EntrezGene: | SATB2 |
HGNC: | 21637 |
UniProt: | C9JR56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 9.18e-35 | 20 |
regional part of cerebral cortex | 1.90e-31 | 22 |
cerebral cortex | 1.99e-27 | 25 |
pallium | 1.99e-27 | 25 |
gyrus | 1.07e-24 | 6 |
cerebral hemisphere | 3.30e-24 | 32 |
telencephalon | 1.29e-22 | 34 |
regional part of telencephalon | 6.72e-21 | 32 |
brain grey matter | 1.63e-19 | 34 |
gray matter | 1.63e-19 | 34 |
regional part of forebrain | 3.06e-18 | 41 |
forebrain | 3.06e-18 | 41 |
anterior neural tube | 3.06e-18 | 41 |
future forebrain | 3.06e-18 | 41 |
regional part of nervous system | 2.24e-15 | 53 |
regional part of brain | 2.24e-15 | 53 |
neural tube | 2.30e-14 | 56 |
neural rod | 2.30e-14 | 56 |
future spinal cord | 2.30e-14 | 56 |
neural keel | 2.30e-14 | 56 |
frontal cortex | 2.74e-13 | 3 |
occipital lobe | 5.65e-13 | 5 |
pre-chordal neural plate | 5.68e-13 | 61 |
brain | 1.61e-12 | 68 |
future brain | 1.61e-12 | 68 |
neural plate | 4.91e-10 | 82 |
presumptive neural plate | 4.91e-10 | 82 |
central nervous system | 6.12e-10 | 81 |
middle frontal gyrus | 1.15e-09 | 2 |
middle temporal gyrus | 1.41e-09 | 2 |
neurectoderm | 2.14e-09 | 86 |
nervous system | 1.36e-08 | 89 |
ecto-epithelium | 4.09e-08 | 104 |
parietal lobe | 6.62e-08 | 5 |
organ system subdivision | 8.67e-08 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.