FFCP PHASE1:Mm9::chr10:127151089..127151100,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=757|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127151089..127151100,+|id=chr10:127151089..127151100,+|ontology_enrichment_celltype=CL:0000239!5.37e-12!6;CL:0000677!5.37e-12!6;CL:0000212!5.37e-12!6;CL:0000584!5.37e-12!6;CL:0002563!2.60e-10!9;CL:0002251!2.60e-10!9;CL:0000075!3.61e-10!7;CL:0000473!5.40e-07!3;CL:0000627!5.40e-07!3;CL:0000682!5.40e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.55e-23!43;UBERON:0000344!1.71e-21!15;UBERON:0005409!1.80e-21!59;UBERON:0001242!1.12e-17!13;UBERON:0000060!1.12e-17!13;UBERON:0001262!1.12e-17!13;UBERON:0004786!1.12e-17!13;UBERON:0004923!3.22e-12!24;UBERON:0003350!2.60e-10!9;UBERON:0004808!2.60e-10!9;UBERON:0001277!2.60e-10!9;UBERON:0001007!1.89e-08!128;UBERON:0001555!1.89e-08!128;UBERON:0007026!1.89e-08!128;UBERON:0000485!3.13e-08!11;UBERON:0004119!3.31e-08!130;UBERON:0000925!3.31e-08!130;UBERON:0006595!3.31e-08!130;UBERON:0000331!2.93e-07!3;UBERON:0002116!2.93e-07!3;UBERON:0001204!2.93e-07!3;UBERON:0001168!2.93e-07!3;UBERON:0004921!4.97e-07!126;UBERON:0004185!4.97e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-24,31;UBERON:0005409,2.13e-18,47;UBERON:0000344,2.92e-17,15;UBERON:0002108,4.29e-13,4;UBERON:0001962,9.34e-12,2;UBERON:0001961,9.34e-12,2;UBERON:0001744,9.34e-12,2;UBERON:0004923,1.44e-10,24;UBERON:0001242,1.60e-10,13;UBERON:0001262,1.60e-10,13;UBERON:0004786,1.60e-10,13;UBERON:0001007,6.21e-09,116;UBERON:0001555,6.21e-09,116;UBERON:0007026,6.21e-09,116;UBERON:0004119,9.52e-09,118;UBERON:0000925,9.52e-09,118;UBERON:0006595,9.52e-09,118;UBERON:0000331,2.37e-08,3;UBERON:0002116,2.37e-08,3;UBERON:0001204,2.37e-08,3;UBERON:0001168,2.37e-08,3;UBERON:0002465,3.92e-08,3;UBERON:0003199,8.98e-07,1|phase1_expression=0,0.348975407639361,0.909998478779072,2.11724947914781,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,0.57423196411502,0.430761996159075,2.80112602491656,6.84084310042946,0.504060259519861,1.10865255327652,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,2.11560453330835,0,0,0,0.80673409849337,0,0.570676878337677,4.74529061544512,0.823494773620054,0.502670417600539,0,0.38992817423824,2.69645822596266,3.24207074812041,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,1.68499465279331,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr10:127151089..127151100,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=757 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127151089..127151100,+ | |||
|id=chr10:127151089..127151100,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.37e-12!6;CL:0000677!5.37e-12!6;CL:0000212!5.37e-12!6;CL:0000584!5.37e-12!6;CL:0002563!2.60e-10!9;CL:0002251!2.60e-10!9;CL:0000075!3.61e-10!7;CL:0000473!5.40e-07!3;CL:0000627!5.40e-07!3;CL:0000682!5.40e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.55e-23!43;UBERON:0000344!1.71e-21!15;UBERON:0005409!1.80e-21!59;UBERON:0001242!1.12e-17!13;UBERON:0000060!1.12e-17!13;UBERON:0001262!1.12e-17!13;UBERON:0004786!1.12e-17!13;UBERON:0004923!3.22e-12!24;UBERON:0003350!2.60e-10!9;UBERON:0004808!2.60e-10!9;UBERON:0001277!2.60e-10!9;UBERON:0001007!1.89e-08!128;UBERON:0001555!1.89e-08!128;UBERON:0007026!1.89e-08!128;UBERON:0000485!3.13e-08!11;UBERON:0004119!3.31e-08!130;UBERON:0000925!3.31e-08!130;UBERON:0006595!3.31e-08!130;UBERON:0000331!2.93e-07!3;UBERON:0002116!2.93e-07!3;UBERON:0001204!2.93e-07!3;UBERON:0001168!2.93e-07!3;UBERON:0004921!4.97e-07!126;UBERON:0004185!4.97e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-24,31;UBERON:0005409,2.13e-18,47;UBERON:0000344,2.92e-17,15;UBERON:0002108,4.29e-13,4;UBERON:0001962,9.34e-12,2;UBERON:0001961,9.34e-12,2;UBERON:0001744,9.34e-12,2;UBERON:0004923,1.44e-10,24;UBERON:0001242,1.60e-10,13;UBERON:0001262,1.60e-10,13;UBERON:0004786,1.60e-10,13;UBERON:0001007,6.21e-09,116;UBERON:0001555,6.21e-09,116;UBERON:0007026,6.21e-09,116;UBERON:0004119,9.52e-09,118;UBERON:0000925,9.52e-09,118;UBERON:0006595,9.52e-09,118;UBERON:0000331,2.37e-08,3;UBERON:0002116,2.37e-08,3;UBERON:0001204,2.37e-08,3;UBERON:0001168,2.37e-08,3;UBERON:0002465,3.92e-08,3;UBERON:0003199,8.98e-07,1 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,2.11724947914781,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,0.57423196411502,0.430761996159075,2.80112602491656,6.84084310042946,0.504060259519861,1.10865255327652,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,2.11560453330835,0,0,0,0.80673409849337,0,0.570676878337677,4.74529061544512,0.823494773620054,0.502670417600539,0,0.38992817423824,2.69645822596266,3.24207074812041,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,1.68499465279331,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:127151089..127151100,+ | |||
}} |
Revision as of 16:04, 12 September 2013
Short description: | p@chr10:127151089..127151100, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127151089..127151100, + |
Coexpression cluster: | MCL_coexpression_mm9:757 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.82e-24 | 31 |
gastrointestinal system | 2.13e-18 | 47 |
mucosa | 2.92e-17 | 15 |
small intestine | 4.29e-13 | 4 |
gut-associated lymphoid tissue | 9.34e-12 | 2 |
mucosa-associated lymphoid tissue | 9.34e-12 | 2 |
lymphoid tissue | 9.34e-12 | 2 |
organ component layer | 1.44e-10 | 24 |
intestinal mucosa | 1.60e-10 | 13 |
wall of intestine | 1.60e-10 | 13 |
gastrointestinal system mucosa | 1.60e-10 | 13 |
digestive system | 6.21e-09 | 116 |
digestive tract | 6.21e-09 | 116 |
primitive gut | 6.21e-09 | 116 |
endoderm-derived structure | 9.52e-09 | 118 |
endoderm | 9.52e-09 | 118 |
presumptive endoderm | 9.52e-09 | 118 |
ileal mucosa | 2.37e-08 | 3 |
ileum | 2.37e-08 | 3 |
mucosa of small intestine | 2.37e-08 | 3 |
wall of small intestine | 2.37e-08 | 3 |
lymphoid system | 3.92e-08 | 3 |
egg chamber | 8.98e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.