FFCP PHASE1:Hg19::chr2:20648924..20648935,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=388|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=668|TSSclassifier=N|UniProt=|association_with_transcript=303bp_to_BC062781_5end|description=CAGE_peak_8_at_RHOB_5end|id=chr2:20648924..20648935,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000159;4.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0000159,6.38e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.39e-10!115;UBERON:0001049!1.84e-08!57;UBERON:0005068!1.84e-08!57;UBERON:0006241!1.84e-08!57;UBERON:0007135!1.84e-08!57;UBERON:0000468!1.86e-08!659;UBERON:0000477!3.62e-08!286;UBERON:0002020!4.73e-08!34;UBERON:0003528!4.73e-08!34;UBERON:0004111!1.05e-07!241;UBERON:0002616!1.69e-07!59;UBERON:0000922!1.71e-07!612;UBERON:0001017!2.01e-07!82;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0002346!2.84e-07!90;UBERON:0000073!2.87e-07!94;UBERON:0001016!2.87e-07!94;UBERON:0000025!3.07e-07!194;UBERON:0001893!4.27e-07!34;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0005743!4.50e-07!86;UBERON:0000480!4.96e-07!626;UBERON:0002791!5.14e-07!33;UBERON:0000062!5.25e-07!511;UBERON:0000467!6.32e-07!625;UBERON:0000923!7.55e-07!604;UBERON:0005291!7.55e-07!604;UBERON:0006598!7.55e-07!604;UBERON:0002532!7.55e-07!604;UBERON:0002780!9.03e-07!41;UBERON:0001890!9.03e-07!41;UBERON:0006240!9.03e-07!41|ontology_enrichment_uberon_v019=UBERON:0003714;3.36e-07;2!UBERON:0003528;7.90e-07;34!UBERON:0002020;7.90e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-10,114;UBERON:0002346,1.69e-10,86;UBERON:0003075,3.93e-10,82;UBERON:0007284,3.93e-10,82;UBERON:0001049,3.03e-09,56;UBERON:0005068,3.03e-09,56;UBERON:0006241,3.03e-09,56;UBERON:0007135,3.03e-09,56;UBERON:0001016,1.13e-08,89;UBERON:0000073,1.35e-08,53;UBERON:0002616,1.35e-08,53;UBERON:0001017,5.94e-08,81;UBERON:0003528,1.02e-07,34;UBERON:0002020,1.02e-07,34;UBERON:0010371,5.44e-07,104;UBERON:0003714,5.49e-07,2;UBERON:0000955,6.41e-07,68;UBERON:0006238,6.41e-07,68;UBERON:0002081,6.97e-07,2;UBERON:0010227,6.97e-07,2|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0,2.59909341216098,0,0,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.684372125364421,1.25542639594803,0,0,0,0.786728553697808,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.868043482863407,0.447830948479849,0,0.515151135268373,0.145398238779565,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0.383587685530591,0.361439152384566,0,1.01392563272577,0,0,0.850813354476611,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,1.37559020970034,0,0,0,0.33472061276467,1.61131726843659,0.760272105718513,1.22031028774085,0.367663080345869,1.62028389576352,0.535798369704479,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0,0,0,0,0,0.74000264525148,0,0,0,0,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0.989067717114227,0,0,0.336672227908132,0,0,0,0.30648779579902,0,1.02088964844019,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,5.90789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0,1.44366447761074,5.55582615091933,2.09279567458058,0,0,0.246217006087397,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0.088048434013226,0,1.44119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.613457458595699,1.00034104211935,0,1.03985430765404,0.892144943985809,0.788512075169673,0.234282829985426,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0.647142602455851,0,0.606255142892519,0,0,0,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.965123526861645,0,0,0.355123450626254,0,0.519254429183621,0.23242075691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4495,1.41482032270754,0,2.05339980651169,0.0673520530145875,0.286888821570705,0.99798106963804,0,0.747091421144008,0,0,0,0,0.813792356631477,0,0.201273793591026,0|short_description=p8@RHOB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=388 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=668 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=303bp_to_BC062781_5end | |||
|description=CAGE_peak_8_at_RHOB_5end | |||
|id=chr2:20648924..20648935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000159;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,6.38e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-10!115;UBERON:0001049!1.84e-08!57;UBERON:0005068!1.84e-08!57;UBERON:0006241!1.84e-08!57;UBERON:0007135!1.84e-08!57;UBERON:0000468!1.86e-08!659;UBERON:0000477!3.62e-08!286;UBERON:0002020!4.73e-08!34;UBERON:0003528!4.73e-08!34;UBERON:0004111!1.05e-07!241;UBERON:0002616!1.69e-07!59;UBERON:0000922!1.71e-07!612;UBERON:0001017!2.01e-07!82;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0002346!2.84e-07!90;UBERON:0000073!2.87e-07!94;UBERON:0001016!2.87e-07!94;UBERON:0000025!3.07e-07!194;UBERON:0001893!4.27e-07!34;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0005743!4.50e-07!86;UBERON:0000480!4.96e-07!626;UBERON:0002791!5.14e-07!33;UBERON:0000062!5.25e-07!511;UBERON:0000467!6.32e-07!625;UBERON:0000923!7.55e-07!604;UBERON:0005291!7.55e-07!604;UBERON:0006598!7.55e-07!604;UBERON:0002532!7.55e-07!604;UBERON:0002780!9.03e-07!41;UBERON:0001890!9.03e-07!41;UBERON:0006240!9.03e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.36e-07;2!UBERON:0003528;7.90e-07;34!UBERON:0002020;7.90e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-10,114;UBERON:0002346,1.69e-10,86;UBERON:0003075,3.93e-10,82;UBERON:0007284,3.93e-10,82;UBERON:0001049,3.03e-09,56;UBERON:0005068,3.03e-09,56;UBERON:0006241,3.03e-09,56;UBERON:0007135,3.03e-09,56;UBERON:0001016,1.13e-08,89;UBERON:0000073,1.35e-08,53;UBERON:0002616,1.35e-08,53;UBERON:0001017,5.94e-08,81;UBERON:0003528,1.02e-07,34;UBERON:0002020,1.02e-07,34;UBERON:0010371,5.44e-07,104;UBERON:0003714,5.49e-07,2;UBERON:0000955,6.41e-07,68;UBERON:0006238,6.41e-07,68;UBERON:0002081,6.97e-07,2;UBERON:0010227,6.97e-07,2 | |||
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| |||
|short_description=p8@RHOB | |||
}} |
Revision as of 16:10, 12 September 2013
Short description: | p8@RHOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RHOB_5end |
Coexpression cluster: | NA |
Association with transcript: | 303bp_to_BC062781_5end |
EntrezGene: | RHOB |
HGNC: | 668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 6.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-10 | 114 |
neurectoderm | 1.69e-10 | 86 |
neural plate | 3.93e-10 | 82 |
presumptive neural plate | 3.93e-10 | 82 |
neural tube | 3.03e-09 | 56 |
neural rod | 3.03e-09 | 56 |
future spinal cord | 3.03e-09 | 56 |
neural keel | 3.03e-09 | 56 |
nervous system | 1.13e-08 | 89 |
regional part of nervous system | 1.35e-08 | 53 |
regional part of brain | 1.35e-08 | 53 |
central nervous system | 5.94e-08 | 81 |
brain grey matter | 1.02e-07 | 34 |
gray matter | 1.02e-07 | 34 |
ecto-epithelium | 5.44e-07 | 104 |
neural tissue | 5.49e-07 | 2 |
brain | 6.41e-07 | 68 |
future brain | 6.41e-07 | 68 |
cardiac atrium | 6.97e-07 | 2 |
future cardiac atrium | 6.97e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.