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FFCP PHASE1:Mm9::chr10:57814692..57814719,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=110829|HGNC=|MCL_coexpression_id=3|UniProt=Q99JW4|association_with_transcript=-146bp_to_ENSMUST00000171162,uc011xeb.1_5end|description=CAGE_peak_7_at_Lims1_5end|id=chr10:57814692..57814719,+|ontology_enrichment_celltype=CL:0000988!2.84e-10!32;CL:0002032!2.84e-10!32;CL:0000037!2.84e-10!32;CL:0000566!2.84e-10!32;CL:0000837!2.84e-10!32;CL:0002031!1.03e-07!25;CL:0000049!6.08e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-18,32;CL:0002032,4.24e-18,32;CL:0000037,4.24e-18,32;CL:0000837,4.24e-18,32;CL:0000049,3.57e-13,19;CL:0002031,6.86e-13,25;CL:0002320,4.36e-11,46;CL:0000134,4.36e-11,46;CL:0000763,4.32e-10,16;CL:0000738,4.27e-09,17;CL:0002087,4.27e-09,17;CL:0000219,2.92e-08,54;CL:0000557,1.31e-07,7;CL:0000553,2.95e-07,6;CL:0000556,2.95e-07,6;CL:0000839,3.07e-07,13;CL:0000838,5.70e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.97e-14!48;UBERON:0002390!2.68e-12!45;UBERON:0003061!2.68e-12!45;UBERON:0002405!3.29e-10!70;UBERON:0002371!1.20e-08!16;UBERON:0001474!3.01e-08!22;UBERON:0004765!3.01e-08!22;UBERON:0001434!3.01e-08!22;UBERON:0002204!3.33e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.51e-19,48;UBERON:0002405,1.51e-19,48;UBERON:0002390,6.33e-17,45;UBERON:0003061,6.33e-17,45;UBERON:0001474,7.56e-12,22;UBERON:0004765,7.56e-12,22;UBERON:0001434,7.56e-12,22;UBERON:0002371,8.55e-12,16;UBERON:0002384,4.36e-11,46;UBERON:0002204,2.03e-10,32;UBERON:0003081,5.84e-08,87;UBERON:0004177,3.02e-07,29;UBERON:0005057,3.02e-07,29;UBERON:0002106,9.83e-07,6;UBERON:0004457,9.83e-07,6;UBERON:0000042,9.83e-07,6;UBERON:0004854,9.83e-07,6;UBERON:0009034,9.83e-07,6;UBERON:0002095,9.83e-07,6;UBERON:0004782,9.83e-07,6;UBERON:0003281,9.83e-07,6;UBERON:0009664,9.83e-07,6;UBERON:0002296,9.83e-07,6;UBERON:0005602,9.83e-07,6;UBERON:0001179,9.83e-07,6;UBERON:0006293,9.83e-07,6|phase1_expression=0,0,0,0,0,0.16787927191189,0,6.97265946584512,1.12630977721333,1.17032263160997,3.93801326918661,3.66951931378547,1.02720437958723,0.34968160967599,2.6648780945253,5.26435695213547,2.09868563438444,15.2999150198745,17.4135330679288,12.7316895539409,0.935476191661768,9.63122226648587,3.91799683708403,4.31979541542198,4.35877634027623,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,84.9619210395923,48.4427913604756,84.8108465237553,69.9995470756907,71.0367304356784,73.7975736607354,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,12.2481302422148,0.725362142011344,1.68046899571232,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0.988866362566974,2.8419204597844,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,1.25602267690966,8.80388804400384,0.593768556259299,0.173485326766136,0,0,0,0.23517741427141,0.628332956648377,0.494389935468748,1.01219549843938,6.19227386364912,0.647067399789637,5.52103796150984,4.363877278217,5.59175283654366,0.292780797011547,0,0.510914110417183,17.972268675888,5.39912457894067,15.1213570216947,0.299581278809645,0.915001205637253,0.376963056338593,0.521472960576829,0.255715457330331,0.83115217823824,0.324482526135515,0,6.09594155989456,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,7.02213187313235,6.17634977075316,12.7873574728017,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0,1.3173006917463,0,0,0.308713837137853,2.64335026387038,0.264450566663544,0,0.232236671860439,1.41754207454303,0,0.889512175379481,0.760902504450237,1.42358718463353,0.494096864172033,1.75934646160189,1.79060824837036,1.55971269695296,0.898819408654221,3.02593269824572,3.18626037206988,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.252946148497029,0.295220295959204,0.156998727841375,0.246794327843601,0,0.83422552858047,0,0.899448449539415,1.21716072833102,1.20588579876208,1.01850340712568,2.5892652370573,2.91843408195064,0.823684239564244,2.87536413054709,1.86070473834252,0.936113019343682,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,1.7339865851681,0.664394068946325,0.956728611944923,1.3109065177259,2.93564469172023,1.3018415272336,10.5553898757491,14.1415477792864,1.47529281905711,0.827810238914197,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.469343416127421,0,0.441056796109924,0.49465875882444,0.484393280087717,0.180938774784468,0.119372344003136,0.492422699235184,0.874442509889552,0.370850604021019,6.83483523191411,2.06386867963222,4.25947412950337,4.89757988212197,5.33107488111998,5.0331198105435,9.17883521966819,7.41742697315387,9.81219814011409,0,0,0,0.432021363287205,0.209088296014469,0,0.134864346384821,0.495920734352016,0,1.68499465279331,1.24267862617385,0,0.299033092087958,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0,0.483168241652012,0,1.58005560314089,0.608175645870493,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,1.20195449519969,0.590758108698309,1.00966449948148,1.143102099825,1.51239277705261,1.16949456887703,1.82802499116626,1.8700304349051,0,0,0,0,0.386379188064381,1.87682475451182,2.74727436400898,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0.51776031175182,0.31136204275253,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.320125762024346,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.914639864363863,0.526139422875686,0.271608227691724,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0.964533054905707,0.499621155875892,0.467863216890817,0.214871054048298,0,0.882365676478062,2.08681052058379|short_description=p7@Lims1}}
|EntrezGene=110829
|HGNC=
|MCL_coexpression_id=3
|UniProt=Q99JW4
|association_with_transcript=-146bp_to_ENSMUST00000171162,uc011xeb.1_5end
|description=CAGE_peak_7_at_Lims1_5end
|id=chr10:57814692..57814719,+
|ontology_enrichment_celltype=CL:0000988!2.84e-10!32;CL:0002032!2.84e-10!32;CL:0000037!2.84e-10!32;CL:0000566!2.84e-10!32;CL:0000837!2.84e-10!32;CL:0002031!1.03e-07!25;CL:0000049!6.08e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-18,32;CL:0002032,4.24e-18,32;CL:0000037,4.24e-18,32;CL:0000837,4.24e-18,32;CL:0000049,3.57e-13,19;CL:0002031,6.86e-13,25;CL:0002320,4.36e-11,46;CL:0000134,4.36e-11,46;CL:0000763,4.32e-10,16;CL:0000738,4.27e-09,17;CL:0002087,4.27e-09,17;CL:0000219,2.92e-08,54;CL:0000557,1.31e-07,7;CL:0000553,2.95e-07,6;CL:0000556,2.95e-07,6;CL:0000839,3.07e-07,13;CL:0000838,5.70e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!6.97e-14!48;UBERON:0002390!2.68e-12!45;UBERON:0003061!2.68e-12!45;UBERON:0002405!3.29e-10!70;UBERON:0002371!1.20e-08!16;UBERON:0001474!3.01e-08!22;UBERON:0004765!3.01e-08!22;UBERON:0001434!3.01e-08!22;UBERON:0002204!3.33e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.51e-19,48;UBERON:0002405,1.51e-19,48;UBERON:0002390,6.33e-17,45;UBERON:0003061,6.33e-17,45;UBERON:0001474,7.56e-12,22;UBERON:0004765,7.56e-12,22;UBERON:0001434,7.56e-12,22;UBERON:0002371,8.55e-12,16;UBERON:0002384,4.36e-11,46;UBERON:0002204,2.03e-10,32;UBERON:0003081,5.84e-08,87;UBERON:0004177,3.02e-07,29;UBERON:0005057,3.02e-07,29;UBERON:0002106,9.83e-07,6;UBERON:0004457,9.83e-07,6;UBERON:0000042,9.83e-07,6;UBERON:0004854,9.83e-07,6;UBERON:0009034,9.83e-07,6;UBERON:0002095,9.83e-07,6;UBERON:0004782,9.83e-07,6;UBERON:0003281,9.83e-07,6;UBERON:0009664,9.83e-07,6;UBERON:0002296,9.83e-07,6;UBERON:0005602,9.83e-07,6;UBERON:0001179,9.83e-07,6;UBERON:0006293,9.83e-07,6
|phase1_expression=0,0,0,0,0,0.16787927191189,0,6.97265946584512,1.12630977721333,1.17032263160997,3.93801326918661,3.66951931378547,1.02720437958723,0.34968160967599,2.6648780945253,5.26435695213547,2.09868563438444,15.2999150198745,17.4135330679288,12.7316895539409,0.935476191661768,9.63122226648587,3.91799683708403,4.31979541542198,4.35877634027623,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,84.9619210395923,48.4427913604756,84.8108465237553,69.9995470756907,71.0367304356784,73.7975736607354,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,12.2481302422148,0.725362142011344,1.68046899571232,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0.988866362566974,2.8419204597844,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,1.25602267690966,8.80388804400384,0.593768556259299,0.173485326766136,0,0,0,0.23517741427141,0.628332956648377,0.494389935468748,1.01219549843938,6.19227386364912,0.647067399789637,5.52103796150984,4.363877278217,5.59175283654366,0.292780797011547,0,0.510914110417183,17.972268675888,5.39912457894067,15.1213570216947,0.299581278809645,0.915001205637253,0.376963056338593,0.521472960576829,0.255715457330331,0.83115217823824,0.324482526135515,0,6.09594155989456,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,7.02213187313235,6.17634977075316,12.7873574728017,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0,1.3173006917463,0,0,0.308713837137853,2.64335026387038,0.264450566663544,0,0.232236671860439,1.41754207454303,0,0.889512175379481,0.760902504450237,1.42358718463353,0.494096864172033,1.75934646160189,1.79060824837036,1.55971269695296,0.898819408654221,3.02593269824572,3.18626037206988,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.252946148497029,0.295220295959204,0.156998727841375,0.246794327843601,0,0.83422552858047,0,0.899448449539415,1.21716072833102,1.20588579876208,1.01850340712568,2.5892652370573,2.91843408195064,0.823684239564244,2.87536413054709,1.86070473834252,0.936113019343682,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,1.7339865851681,0.664394068946325,0.956728611944923,1.3109065177259,2.93564469172023,1.3018415272336,10.5553898757491,14.1415477792864,1.47529281905711,0.827810238914197,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.469343416127421,0,0.441056796109924,0.49465875882444,0.484393280087717,0.180938774784468,0.119372344003136,0.492422699235184,0.874442509889552,0.370850604021019,6.83483523191411,2.06386867963222,4.25947412950337,4.89757988212197,5.33107488111998,5.0331198105435,9.17883521966819,7.41742697315387,9.81219814011409,0,0,0,0.432021363287205,0.209088296014469,0,0.134864346384821,0.495920734352016,0,1.68499465279331,1.24267862617385,0,0.299033092087958,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0,0.483168241652012,0,1.58005560314089,0.608175645870493,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,1.20195449519969,0.590758108698309,1.00966449948148,1.143102099825,1.51239277705261,1.16949456887703,1.82802499116626,1.8700304349051,0,0,0,0,0.386379188064381,1.87682475451182,2.74727436400898,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0.51776031175182,0.31136204275253,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.320125762024346,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.914639864363863,0.526139422875686,0.271608227691724,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0.964533054905707,0.499621155875892,0.467863216890817,0.214871054048298,0,0.882365676478062,2.08681052058379
|short_description=p7@Lims1
}}

Revision as of 16:56, 12 September 2013

Short description:p7@Lims1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Lims1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: -146bp_to_ENSMUST00000171162, uc011xeb.1_5end
EntrezGene:Lims1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Lims1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G884.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H148.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H384.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G970.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H271.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H473.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.12
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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