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FFCP PHASE1:Mm9::chr10:59569082..59569112,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=94214|HGNC=|MCL_coexpression_id=1|UniProt=Q9ER58|association_with_transcript=77bp_to_NM_052994,uc007fek.1,uc007fel.1_5end|description=CAGE_peak_5_at_Spock2_5end|id=chr10:59569082..59569112,+|ontology_enrichment_celltype=CL:0000117!1.51e-10!23;CL:0000337!1.51e-10!23;CL:0000540!1.49e-09!33;CL:0000047!1.49e-09!33;CL:0000031!1.49e-09!33;CL:0000404!1.49e-09!33;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!2.62e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-11,23;CL:0000337,4.02e-11,23;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0000221,5.75e-07,44;CL:0000133,5.75e-07,44;CL:0000393,7.82e-07,39;CL:0000211,7.82e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!1.53e-21!73;UBERON:0005743!1.53e-21!73;UBERON:0000073!2.16e-21!75;UBERON:0001016!2.16e-21!75;UBERON:0004121!2.46e-21!102;UBERON:0000924!2.46e-21!102;UBERON:0006601!2.46e-21!102;UBERON:0000033!2.37e-20!63;UBERON:0001049!1.44e-19!52;UBERON:0005068!1.44e-19!52;UBERON:0006241!1.44e-19!52;UBERON:0007135!1.44e-19!52;UBERON:0000955!2.55e-18!50;UBERON:0006238!2.55e-18!50;UBERON:0002616!8.61e-18!49;UBERON:0003056!1.81e-15!49;UBERON:0007811!2.25e-14!86;UBERON:0003080!9.32e-14!40;UBERON:0000153!2.12e-13!94;UBERON:0002020!3.80e-13!34;UBERON:0002780!3.87e-13!39;UBERON:0001890!3.87e-13!39;UBERON:0006240!3.87e-13!39;UBERON:0002791!3.75e-10!29;UBERON:0003528!3.75e-10!29;UBERON:0001893!3.75e-10!29;UBERON:0000468!9.44e-08!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-22,64;UBERON:0003075,2.49e-22,64;UBERON:0007284,2.49e-22,64;UBERON:0000073,1.04e-21,54;UBERON:0001017,1.54e-21,73;UBERON:0001016,4.97e-21,75;UBERON:0001049,4.02e-20,52;UBERON:0005068,4.02e-20,52;UBERON:0006241,4.02e-20,52;UBERON:0007135,4.02e-20,52;UBERON:0004121,9.46e-19,95;UBERON:0000924,9.46e-19,95;UBERON:0006601,9.46e-19,95;UBERON:0010371,1.11e-18,73;UBERON:0010314,2.70e-17,92;UBERON:0000955,1.41e-16,47;UBERON:0006238,1.41e-16,47;UBERON:0003056,4.67e-16,49;UBERON:0002616,4.93e-16,46;UBERON:0003080,3.14e-14,40;UBERON:0002780,1.41e-13,39;UBERON:0001890,1.41e-13,39;UBERON:0006240,1.41e-13,39;UBERON:0002020,1.45e-13,34;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0003076,9.90e-07,12;UBERON:0003057,9.90e-07,12|phase1_expression=23.7020293715095,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0.893618560807968,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,0.65407546914134,1.09843091367236,0.777719596297134,0.979904951377538,2.87505128729943,0,1.45072428402269,0,0,0.573066879877513,4.64104883049698,13.5552028775931,18.5146842745212,14.5781222806421,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,3.62913643079672,3.37514845829227,3.15487442027073,46.2754594734162,37.3267834208227,2.69479758272899,3.1629005436018,2.75765635983006,66.0695285996332,89.8918860119721,84.6371998241901,14.1118327871307,15.7358746996145,14.0646610050325,59.4659787872941,47.2720592426611,52.1042024918922,31.2306300602088,29.043822883017,20.1311401491325,0.908714319998209,4.30757892608677,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0,15.3519327556582,0,0,0,0,0,0,2.8545969929765,0,4.45326417194474,2.77576522825817,3.95805121805784,3.92046345335299,4.6724018571313,6.34979018532806,1.63366568728578,1.48316980640624,0.722996784599558,0,0.485300549842228,0.883366073841574,0.969750506270444,0,24.3008061519584,42.5176814831314,0.766371165625774,0,0,0,35.6501721783478,13.2675174817402,6.78533501409468,14.9488915365358,15.8543583544805,50.076918738854,31.1503225090095,5.39748628406676,1.8661045591514,0.758168275301024,3.36706969418358,2.47228841629137,3.21862946206862,4.32149111532838,5.12396380641431,6.46346741937615,4.99643509110914,6.8402258928602,11.9003550539947,0.862271971731369,1.89106080167819,1.93546236580344,1.09597866213787,2.22437799380478,4.52727816478817,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,0,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,1.86027155800326,1.87791380979733,3.97002164048376,1.31647879930784,0.820837320395476,1.37816976227955,2.63159977365598,0.658650345873152,2.41571553768669,18.2952255250791,10.0846520131699,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,10.4317345524195,7.65465034485183,5.63538678365402,7.94240178596726,5.81857461502877,7.01358198903186,0.822074982615345,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,15.1497615936616,1.32643988239339,0,1.01847051465113,0.469380496577004,4.85768146581266,13.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|EntrezGene=94214
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q9ER58
|association_with_transcript=77bp_to_NM_052994,uc007fek.1,uc007fel.1_5end
|description=CAGE_peak_5_at_Spock2_5end
|id=chr10:59569082..59569112,+
|ontology_enrichment_celltype=CL:0000117!1.51e-10!23;CL:0000337!1.51e-10!23;CL:0000540!1.49e-09!33;CL:0000047!1.49e-09!33;CL:0000031!1.49e-09!33;CL:0000404!1.49e-09!33;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!2.62e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-11,23;CL:0000337,4.02e-11,23;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0000221,5.75e-07,44;CL:0000133,5.75e-07,44;CL:0000393,7.82e-07,39;CL:0000211,7.82e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!1.53e-21!73;UBERON:0005743!1.53e-21!73;UBERON:0000073!2.16e-21!75;UBERON:0001016!2.16e-21!75;UBERON:0004121!2.46e-21!102;UBERON:0000924!2.46e-21!102;UBERON:0006601!2.46e-21!102;UBERON:0000033!2.37e-20!63;UBERON:0001049!1.44e-19!52;UBERON:0005068!1.44e-19!52;UBERON:0006241!1.44e-19!52;UBERON:0007135!1.44e-19!52;UBERON:0000955!2.55e-18!50;UBERON:0006238!2.55e-18!50;UBERON:0002616!8.61e-18!49;UBERON:0003056!1.81e-15!49;UBERON:0007811!2.25e-14!86;UBERON:0003080!9.32e-14!40;UBERON:0000153!2.12e-13!94;UBERON:0002020!3.80e-13!34;UBERON:0002780!3.87e-13!39;UBERON:0001890!3.87e-13!39;UBERON:0006240!3.87e-13!39;UBERON:0002791!3.75e-10!29;UBERON:0003528!3.75e-10!29;UBERON:0001893!3.75e-10!29;UBERON:0000468!9.44e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-22,64;UBERON:0003075,2.49e-22,64;UBERON:0007284,2.49e-22,64;UBERON:0000073,1.04e-21,54;UBERON:0001017,1.54e-21,73;UBERON:0001016,4.97e-21,75;UBERON:0001049,4.02e-20,52;UBERON:0005068,4.02e-20,52;UBERON:0006241,4.02e-20,52;UBERON:0007135,4.02e-20,52;UBERON:0004121,9.46e-19,95;UBERON:0000924,9.46e-19,95;UBERON:0006601,9.46e-19,95;UBERON:0010371,1.11e-18,73;UBERON:0010314,2.70e-17,92;UBERON:0000955,1.41e-16,47;UBERON:0006238,1.41e-16,47;UBERON:0003056,4.67e-16,49;UBERON:0002616,4.93e-16,46;UBERON:0003080,3.14e-14,40;UBERON:0002780,1.41e-13,39;UBERON:0001890,1.41e-13,39;UBERON:0006240,1.41e-13,39;UBERON:0002020,1.45e-13,34;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0003076,9.90e-07,12;UBERON:0003057,9.90e-07,12
|phase1_expression=23.7020293715095,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0.893618560807968,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,0.65407546914134,1.09843091367236,0.777719596297134,0.979904951377538,2.87505128729943,0,1.45072428402269,0,0,0.573066879877513,4.64104883049698,13.5552028775931,18.5146842745212,14.5781222806421,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,3.62913643079672,3.37514845829227,3.15487442027073,46.2754594734162,37.3267834208227,2.69479758272899,3.1629005436018,2.75765635983006,66.0695285996332,89.8918860119721,84.6371998241901,14.1118327871307,15.7358746996145,14.0646610050325,59.4659787872941,47.2720592426611,52.1042024918922,31.2306300602088,29.043822883017,20.1311401491325,0.908714319998209,4.30757892608677,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0,15.3519327556582,0,0,0,0,0,0,2.8545969929765,0,4.45326417194474,2.77576522825817,3.95805121805784,3.92046345335299,4.6724018571313,6.34979018532806,1.63366568728578,1.48316980640624,0.722996784599558,0,0.485300549842228,0.883366073841574,0.969750506270444,0,24.3008061519584,42.5176814831314,0.766371165625774,0,0,0,35.6501721783478,13.2675174817402,6.78533501409468,14.9488915365358,15.8543583544805,50.076918738854,31.1503225090095,5.39748628406676,1.8661045591514,0.758168275301024,3.36706969418358,2.47228841629137,3.21862946206862,4.32149111532838,5.12396380641431,6.46346741937615,4.99643509110914,6.8402258928602,11.9003550539947,0.862271971731369,1.89106080167819,1.93546236580344,1.09597866213787,2.22437799380478,4.52727816478817,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,0,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,1.86027155800326,1.87791380979733,3.97002164048376,1.31647879930784,0.820837320395476,1.37816976227955,2.63159977365598,0.658650345873152,2.41571553768669,18.2952255250791,10.0846520131699,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,10.4317345524195,7.65465034485183,5.63538678365402,7.94240178596726,5.81857461502877,7.01358198903186,0.822074982615345,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,15.1497615936616,1.32643988239339,0,1.01847051465113,0.469380496577004,4.85768146581266,13.5684875305028,19.1230974900643,14.1871629695572,17.4957104822532,21.0480294627883,13.4367918066905,20.2041428783098,19.6722719670856,0,0,0.491764273019036,0,35.8027815672776,35.5151410374376,0,3.53459298086122,2.83957397474631,2.73307121007647,5.17016154558717,0.238968797952552,0.891194696329576,1.13230612315533,2.83367491172426,2.92255857911312,3.16230222357219,16.3873871375122,6.67118400478862,3.38324646967785,5.37526965866801,5.44401405809367,0,1.69946445308487,2.11626489875326,0.754420319023592,1.77181135728464,1.53717573971964,3.35956781118687,2.54473610634254,2.13898427030833,1.8962205476149,1.05418608574999,0,16.3411010761818,1.26042765821917,3.10460841078611,3.42939256050548,4.78818630834139,12.664186049747,13.657568709976,20.7036165397928,0,0,1.98475558249466,0.65954501176592,1.45317984026315,0.844380948994182,0.477489376012546,0.328281799490123,1.7488850197791,46.3563255026274,0.170870880797853,2.06386867963222,0.740778109478847,0,0.27338845544205,0,0,0.419854356970974,0.552799895217695,0,0.316335993581135,0.813277868507395,1.29606408986162,1.04544148007234,1.52853794622324,0.674321731924103,0.909188012978695,1.04702376793612,1.03691978633434,1.24267862617385,5.6369293868419,3.43888055901151,5.79104716599842,9.13920585217024,11.1077448190849,14.0233584157346,17.1341568422801,21.6139278840957,19.6086974076079,11.3544536788223,7.20075015644664,3.79213344753814,10.9471616256689,10.1683847593179,8.70469513951227,6.08690765269437,3.57626438606277,3.36547258655913,2.36303243479324,1.61546319917036,2.97206545954499,0.907435666231565,1.75424185331554,1.44317762460494,1.5193997283604,0.453460767230423,0.221985953374065,0.0897138566094757,0.335769232728157,1.9318959403219,2.25218970541418,2.38097111547445,0.428736758158132,2.00628841614145,17.5073071211291,15.1907328047368,17.7597609166213,16.8416118696814,21.2375581128899,15.8632718451837,15.5255175053315,21.1650965515384,14.5005570874945,17.0860902878101,0.93408612825759,4.38927360741134,1.70733605754134,3.40349403895612,1.04806581313991,2.02227859295016,1.77797382241292,2.88449080134452,3.85103051510178,2.52697211763797,4.05566879824384,3.39527414494937,3.37109426891577,4.03358460150676,3.0440798546475,2.85776214769844,4.86714168968393,4.43691207066522,3.70877310722976,5.15196220470391,5.82877729055206,3.19456451086807,4.29185141905178,3.63366041580821,4.23492211868988,3.63842813934209,3.29270351170991,2.36762740294059,3.12349461845482,2.80571135828869,3.44041552560105,3.64466584789585,2.04615521584845,4.95797891795091,2.70069255373598,6.99469618226249,2.57324769289949,3.86767897286937,4.97349663378993,1.32354851471709,3.01428186306548
|short_description=p5@Spock2
}}

Revision as of 16:59, 12 September 2013

Short description:p5@Spock2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Spock2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 77bp_to_NM_052994, uc007fek.1, uc007fel.1_5end
EntrezGene:Spock2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Spock2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F146.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D366.07
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F389.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D784.64
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E459.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E547.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I652.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I242.52
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.65
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D514.95
cortex, neonate N30.CNhs11107.1392-42F215.85
diencephalon, adult.CNhs10482.20-12F250.08
diencephalon, neonate N30.CNhs11201.1388-42B231.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G86.84
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E818.30
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F87.65
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G77.01
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B115.15
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E514.19
lung, neonate N07.CNhs11111.715-19A317.50
lung, neonate N10.CNhs11219.750-23E621.05
lung, neonate N20.CNhs11109.822-18A413.44
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H219.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C235.80
medulla oblongata, neonate N30.CNhs11200.1396-42A335.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G816.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E920.70
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C946.36
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G59.14
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G514.02
testis, neonate N00.CNhs11189.1300-22B717.13
testis, neonate N07.CNhs11222.726-26I421.61
testis, neonate N10.CNhs11204.763-44D919.61
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I210.17
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.49e-2264
neural plate2.49e-2264
presumptive neural plate2.49e-2264
regional part of nervous system1.04e-2154
central nervous system1.54e-2173
nervous system4.97e-2175
neural tube4.02e-2052
neural rod4.02e-2052
future spinal cord4.02e-2052
neural keel4.02e-2052
ectoderm-derived structure9.46e-1995
ectoderm9.46e-1995
presumptive ectoderm9.46e-1995
ecto-epithelium1.11e-1873
structure with developmental contribution from neural crest2.70e-1792
brain1.41e-1647
future brain1.41e-1647
pre-chordal neural plate4.67e-1649
regional part of brain4.93e-1646
anterior neural tube3.14e-1440
regional part of forebrain1.41e-1339
forebrain1.41e-1339
future forebrain1.41e-1339
gray matter1.45e-1334
brain grey matter2.11e-1029
regional part of telencephalon2.11e-1029
telencephalon2.11e-1029
posterior neural tube9.90e-0712
chordal neural plate9.90e-0712







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