FFCP PHASE1:Mm9::chr10:75034298..75034331,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14598|HGNC=|MCL_coexpression_id=11|UniProt=|association_with_transcript=0bp_to_ENSMUST00000148447_5end|description=CAGE_peak_3_at_Ggt1_5end|id=chr10:75034298..75034331,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!7.33e-12!14;UBERON:0003918!7.33e-12!14;UBERON:0005095!7.33e-12!14;UBERON:0007687!7.33e-12!14;UBERON:0000955!1.70e-11!50;UBERON:0006238!1.70e-11!50;UBERON:0002616!7.38e-11!49;UBERON:0001049!1.43e-10!52;UBERON:0005068!1.43e-10!52;UBERON:0006241!1.43e-10!52;UBERON:0007135!1.43e-10!52;UBERON:0000489!3.08e-10!21;UBERON:0003080!8.05e-10!40;UBERON:0006554!9.92e-10!16;UBERON:0002791!1.38e-09!29;UBERON:0003528!1.38e-09!29;UBERON:0001893!1.38e-09!29;UBERON:0002020!2.01e-09!34;UBERON:0002780!2.41e-09!39;UBERON:0001890!2.41e-09!39;UBERON:0006240!2.41e-09!39;UBERON:0001008!7.31e-09!17;UBERON:0000033!5.12e-08!63;UBERON:0003056!1.34e-07!49;UBERON:0001017!1.40e-07!73;UBERON:0005743!1.40e-07!73;UBERON:0000073!4.42e-07!75;UBERON:0001016!4.42e-07!75;UBERON:0000956!8.80e-07!21;UBERON:0001869!8.80e-07!21;UBERON:0000203!8.80e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0006554,6.35e-23,18;UBERON:0002113,5.19e-22,14;UBERON:0003918,5.19e-22,14;UBERON:0011143,5.19e-22,14;UBERON:0005095,5.19e-22,14;UBERON:0007687,5.19e-22,14;UBERON:0001008,1.60e-21,19;UBERON:0000489,1.14e-13,21;UBERON:0004175,1.18e-08,9;UBERON:0005631,9.12e-08,3;UBERON:0000478,9.12e-08,3;UBERON:0000158,9.12e-08,3;UBERON:0001301,2.85e-07,3;UBERON:0006555,2.85e-07,3;UBERON:0005103,2.85e-07,3;UBERON:0000083,2.85e-07,3;UBERON:0009201,2.85e-07,3;UBERON:0004819,2.85e-07,3;UBERON:0006553,2.85e-07,3;UBERON:0003074,2.85e-07,3;UBERON:0003060,2.85e-07,3;UBERON:0004871,3.14e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9438961633905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0.919218786610021,0,1.78762273319263,1.68967186581868,0.131886287730194,0.182975287204819,0,1.95428099300967,3.37657566019008,1.06958773443767,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,25.9822177243741,0,0,0,0,0,0,0,0,0,0,42.5905871352094,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.748953197024114,0.915001205637253,0.376963056338593,1.39059456153821,1.79000820131231,0.83115217823824,0.162241263067758,3.05518091550949,3.4833951770826,15.1633655060205,0,0.130120442962704,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0,0,1.11189021922435,2.28270751335071,0,1.4822905925161,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.569003702859245,3.88444942873078,14.6520056375005,23.6235540300565,40.1481648436985,50.3575186812487,59.0629256740563,107.903018173089,111.783094223059,117.103908561789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,83.3084563626172,42.366414172764,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.387479470433193,0,0.234714477291508,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0.335769232728157,0,9.00875882165674,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,3.0215755895588,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,0,0,0,0,0,1.33348036680969,0.206035057238894,1.60459604795908,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.960377286073039,0.689225627467359,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.47198920134397,0.342869252385415,0.177475806159338,1.66905332963125,0,0.658765662907314,0.423073039458382,0.73171189149109,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,0.464810523557898,0.578719832943424,0,1.16965804222704,0.859484216193193,0,0,0|short_description=p3@Ggt1}} | ||
|EntrezGene=14598 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000148447_5end | |||
|description=CAGE_peak_3_at_Ggt1_5end | |||
|id=chr10:75034298..75034331,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.33e-12!14;UBERON:0003918!7.33e-12!14;UBERON:0005095!7.33e-12!14;UBERON:0007687!7.33e-12!14;UBERON:0000955!1.70e-11!50;UBERON:0006238!1.70e-11!50;UBERON:0002616!7.38e-11!49;UBERON:0001049!1.43e-10!52;UBERON:0005068!1.43e-10!52;UBERON:0006241!1.43e-10!52;UBERON:0007135!1.43e-10!52;UBERON:0000489!3.08e-10!21;UBERON:0003080!8.05e-10!40;UBERON:0006554!9.92e-10!16;UBERON:0002791!1.38e-09!29;UBERON:0003528!1.38e-09!29;UBERON:0001893!1.38e-09!29;UBERON:0002020!2.01e-09!34;UBERON:0002780!2.41e-09!39;UBERON:0001890!2.41e-09!39;UBERON:0006240!2.41e-09!39;UBERON:0001008!7.31e-09!17;UBERON:0000033!5.12e-08!63;UBERON:0003056!1.34e-07!49;UBERON:0001017!1.40e-07!73;UBERON:0005743!1.40e-07!73;UBERON:0000073!4.42e-07!75;UBERON:0001016!4.42e-07!75;UBERON:0000956!8.80e-07!21;UBERON:0001869!8.80e-07!21;UBERON:0000203!8.80e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,6.35e-23,18;UBERON:0002113,5.19e-22,14;UBERON:0003918,5.19e-22,14;UBERON:0011143,5.19e-22,14;UBERON:0005095,5.19e-22,14;UBERON:0007687,5.19e-22,14;UBERON:0001008,1.60e-21,19;UBERON:0000489,1.14e-13,21;UBERON:0004175,1.18e-08,9;UBERON:0005631,9.12e-08,3;UBERON:0000478,9.12e-08,3;UBERON:0000158,9.12e-08,3;UBERON:0001301,2.85e-07,3;UBERON:0006555,2.85e-07,3;UBERON:0005103,2.85e-07,3;UBERON:0000083,2.85e-07,3;UBERON:0009201,2.85e-07,3;UBERON:0004819,2.85e-07,3;UBERON:0006553,2.85e-07,3;UBERON:0003074,2.85e-07,3;UBERON:0003060,2.85e-07,3;UBERON:0004871,3.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.9438961633905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0.919218786610021,0,1.78762273319263,1.68967186581868,0.131886287730194,0.182975287204819,0,1.95428099300967,3.37657566019008,1.06958773443767,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,25.9822177243741,0,0,0,0,0,0,0,0,0,0,42.5905871352094,0,0,0,0,0,0,0,0,10.3821886448437,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.748953197024114,0.915001205637253,0.376963056338593,1.39059456153821,1.79000820131231,0.83115217823824,0.162241263067758,3.05518091550949,3.4833951770826,15.1633655060205,0,0.130120442962704,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0,0,1.11189021922435,2.28270751335071,0,1.4822905925161,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.569003702859245,3.88444942873078,14.6520056375005,23.6235540300565,40.1481648436985,50.3575186812487,59.0629256740563,107.903018173089,111.783094223059,117.103908561789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0.712262414669021,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,83.3084563626172,42.366414172764,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.387479470433193,0,0.234714477291508,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0.335769232728157,0,9.00875882165674,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,3.0215755895588,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,0,0,0,0,0,1.33348036680969,0.206035057238894,1.60459604795908,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.960377286073039,0.689225627467359,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.47198920134397,0.342869252385415,0.177475806159338,1.66905332963125,0,0.658765662907314,0.423073039458382,0.73171189149109,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,0.464810523557898,0.578719832943424,0,1.16965804222704,0.859484216193193,0,0,0 | |||
|short_description=p3@Ggt1 | |||
}} |
Revision as of 17:21, 12 September 2013
Short description: | p3@Ggt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ggt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000148447_5end |
EntrezGene: | Ggt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 6.35e-23 | 18 |
kidney | 5.19e-22 | 14 |
kidney mesenchyme | 5.19e-22 | 14 |
upper urinary tract | 5.19e-22 | 14 |
kidney rudiment | 5.19e-22 | 14 |
kidney field | 5.19e-22 | 14 |
renal system | 1.60e-21 | 19 |
cavitated compound organ | 1.14e-13 | 21 |
internal genitalia | 1.18e-08 | 9 |
extraembryonic membrane | 9.12e-08 | 3 |
extraembryonic structure | 9.12e-08 | 3 |
membranous layer | 9.12e-08 | 3 |
epididymis | 2.85e-07 | 3 |
excretory tube | 2.85e-07 | 3 |
mesonephric epithelium | 2.85e-07 | 3 |
mesonephric tubule | 2.85e-07 | 3 |
nephric duct | 2.85e-07 | 3 |
kidney epithelium | 2.85e-07 | 3 |
renal duct | 2.85e-07 | 3 |
mesonephric duct | 2.85e-07 | 3 |
pronephric duct | 2.85e-07 | 3 |
somatic layer of lateral plate mesoderm | 3.14e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.