FFCP PHASE1:Mm9::chr10:92587157..92587200,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=36|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:92587157..92587200,-|id=chr10:92587157..92587200,-|ontology_enrichment_celltype=CL:0000838!5.09e-10!12;CL:0000084!2.30e-09!11;CL:0000827!2.30e-09!11;CL:0000542!7.16e-09!13;CL:0000051!7.16e-09!13;CL:0002031!1.03e-08!25;CL:0000988!5.34e-08!32;CL:0002032!5.34e-08!32;CL:0000037!5.34e-08!32;CL:0000566!5.34e-08!32;CL:0000837!5.34e-08!32;CL:0000791!7.19e-08!9;CL:0000789!7.19e-08!9;CL:0002420!7.19e-08!9;CL:0002419!7.19e-08!9;CL:0000790!7.19e-08!9;CL:0000624!3.96e-07!8;CL:0000738!7.50e-07!17;CL:0002087!7.50e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,6.85e-17,12;CL:0000542,1.97e-15,13;CL:0000051,1.97e-15,13;CL:0000084,3.05e-15,11;CL:0000827,3.05e-15,11;CL:0002031,5.67e-12,25;CL:0000988,1.04e-11,32;CL:0002032,1.04e-11,32;CL:0000037,1.04e-11,32;CL:0000837,1.04e-11,32;CL:0000791,1.36e-11,9;CL:0000789,1.36e-11,9;CL:0002420,1.36e-11,9;CL:0002419,1.36e-11,9;CL:0000790,1.36e-11,9;CL:0000738,2.55e-11,17;CL:0002087,2.55e-11,17;CL:0000624,8.19e-10,8;CL:0002320,3.72e-07,46;CL:0000134,3.72e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.52e-07,3;DOID:4045,2.52e-07,3|ontology_enrichment_uberon=UBERON:0004177!9.41e-17!29;UBERON:0002193!3.18e-16!48;UBERON:0002390!5.26e-15!45;UBERON:0003061!5.26e-15!45;UBERON:0003408!7.10e-14!24;UBERON:0006562!8.37e-14!24;UBERON:0001557!8.37e-14!24;UBERON:0001042!8.37e-14!24;UBERON:0008814!8.37e-14!24;UBERON:0009145!8.37e-14!24;UBERON:0002370!2.46e-13!23;UBERON:0000974!2.46e-13!23;UBERON:0004807!2.46e-13!23;UBERON:0005058!2.46e-13!23;UBERON:0003351!2.46e-13!23;UBERON:0009113!2.46e-13!23;UBERON:0003295!2.46e-13!23;UBERON:0009722!2.46e-13!23;UBERON:0005562!2.46e-13!23;UBERON:0007690!2.46e-13!23;UBERON:0002405!6.83e-12!70;UBERON:0001004!1.02e-11!42;UBERON:0000072!3.00e-11!27;UBERON:0000065!3.25e-11!41;UBERON:0003081!1.13e-10!88;UBERON:0005057!2.42e-10!51;UBERON:0000063!3.37e-08!35;UBERON:0001041!1.07e-07!92;UBERON:0000077!1.61e-07!97;UBERON:0003104!4.20e-07!131;UBERON:0009142!4.20e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.86e-25,29;UBERON:0005057,7.86e-25,29;UBERON:0002370,3.41e-23,23;UBERON:0000974,3.41e-23,23;UBERON:0004807,3.41e-23,23;UBERON:0005058,3.41e-23,23;UBERON:0003351,3.41e-23,23;UBERON:0009113,3.41e-23,23;UBERON:0003295,3.41e-23,23;UBERON:0009722,3.41e-23,23;UBERON:0005562,3.41e-23,23;UBERON:0007690,3.41e-23,23;UBERON:0006562,4.65e-22,24;UBERON:0003408,4.65e-22,24;UBERON:0001557,4.65e-22,24;UBERON:0001042,4.65e-22,24;UBERON:0008814,4.65e-22,24;UBERON:0009145,4.65e-22,24;UBERON:0002193,4.88e-20,48;UBERON:0002405,4.88e-20,48;UBERON:0000077,9.41e-20,35;UBERON:0002390,1.67e-19,45;UBERON:0003061,1.67e-19,45;UBERON:0000072,3.70e-19,27;UBERON:0007811,2.26e-13,36;UBERON:0000065,2.88e-11,41;UBERON:0001004,6.61e-11,42;UBERON:0000153,1.46e-10,43;UBERON:0003081,1.72e-10,87;UBERON:0000490,1.76e-08,66;UBERON:0000926,2.02e-08,120;UBERON:0004120,2.02e-08,120;UBERON:0006603,2.02e-08,120;UBERON:0003929,1.93e-07,55;UBERON:0002384,3.72e-07,46|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,6.89864738543167,0.936258105287974,2.73948749160808,0.478632953972018,5.9920255475922,2.01066925563694,0.333109761815663,0.607425802169478,0,1.10411757875383,2.33094537129756,0.84877930359606,0.0850432901510698,2.6808556824239,2.87319768052829,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,4.60384793810598,1.5626706890476,4.18818995179039,12.9410927366823,12.294818729252,6.79714494243615,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,6.99132285847364,0,0,0,0,0.150722640552623,0,0,0,0.86759614151947,2.65383165584962,0.323533699894818,1.32504911076236,3.39412677194655,0,0,0,0.510914110417183,0.479260498023681,0,1.14363204365758,0,0,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.870848794270651,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0,0.899448449539415,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,1.48155621895769,0.941842285023455,1.6403307326523,1.83022538565218,0.509935289981566,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0,0,13.5884781870117,0.608175645870493,1.54066435747241,0.909445760844565,2.14832034800978,6.35780335300048,4.80781798079875,5.90758108698309,6.5628192466296,6.55378537232999,5.94874492307359,4.0932309910696,10.4870907387959,12.3889516312463,0.453460767230423,0,0,0,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421|short_description=p@chr10:92587157..92587200,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:92587157..92587200,- | |||
|id=chr10:92587157..92587200,- | |||
|ontology_enrichment_celltype=CL:0000838!5.09e-10!12;CL:0000084!2.30e-09!11;CL:0000827!2.30e-09!11;CL:0000542!7.16e-09!13;CL:0000051!7.16e-09!13;CL:0002031!1.03e-08!25;CL:0000988!5.34e-08!32;CL:0002032!5.34e-08!32;CL:0000037!5.34e-08!32;CL:0000566!5.34e-08!32;CL:0000837!5.34e-08!32;CL:0000791!7.19e-08!9;CL:0000789!7.19e-08!9;CL:0002420!7.19e-08!9;CL:0002419!7.19e-08!9;CL:0000790!7.19e-08!9;CL:0000624!3.96e-07!8;CL:0000738!7.50e-07!17;CL:0002087!7.50e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.85e-17,12;CL:0000542,1.97e-15,13;CL:0000051,1.97e-15,13;CL:0000084,3.05e-15,11;CL:0000827,3.05e-15,11;CL:0002031,5.67e-12,25;CL:0000988,1.04e-11,32;CL:0002032,1.04e-11,32;CL:0000037,1.04e-11,32;CL:0000837,1.04e-11,32;CL:0000791,1.36e-11,9;CL:0000789,1.36e-11,9;CL:0002420,1.36e-11,9;CL:0002419,1.36e-11,9;CL:0000790,1.36e-11,9;CL:0000738,2.55e-11,17;CL:0002087,2.55e-11,17;CL:0000624,8.19e-10,8;CL:0002320,3.72e-07,46;CL:0000134,3.72e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.52e-07,3;DOID:4045,2.52e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.41e-17!29;UBERON:0002193!3.18e-16!48;UBERON:0002390!5.26e-15!45;UBERON:0003061!5.26e-15!45;UBERON:0003408!7.10e-14!24;UBERON:0006562!8.37e-14!24;UBERON:0001557!8.37e-14!24;UBERON:0001042!8.37e-14!24;UBERON:0008814!8.37e-14!24;UBERON:0009145!8.37e-14!24;UBERON:0002370!2.46e-13!23;UBERON:0000974!2.46e-13!23;UBERON:0004807!2.46e-13!23;UBERON:0005058!2.46e-13!23;UBERON:0003351!2.46e-13!23;UBERON:0009113!2.46e-13!23;UBERON:0003295!2.46e-13!23;UBERON:0009722!2.46e-13!23;UBERON:0005562!2.46e-13!23;UBERON:0007690!2.46e-13!23;UBERON:0002405!6.83e-12!70;UBERON:0001004!1.02e-11!42;UBERON:0000072!3.00e-11!27;UBERON:0000065!3.25e-11!41;UBERON:0003081!1.13e-10!88;UBERON:0005057!2.42e-10!51;UBERON:0000063!3.37e-08!35;UBERON:0001041!1.07e-07!92;UBERON:0000077!1.61e-07!97;UBERON:0003104!4.20e-07!131;UBERON:0009142!4.20e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.86e-25,29;UBERON:0005057,7.86e-25,29;UBERON:0002370,3.41e-23,23;UBERON:0000974,3.41e-23,23;UBERON:0004807,3.41e-23,23;UBERON:0005058,3.41e-23,23;UBERON:0003351,3.41e-23,23;UBERON:0009113,3.41e-23,23;UBERON:0003295,3.41e-23,23;UBERON:0009722,3.41e-23,23;UBERON:0005562,3.41e-23,23;UBERON:0007690,3.41e-23,23;UBERON:0006562,4.65e-22,24;UBERON:0003408,4.65e-22,24;UBERON:0001557,4.65e-22,24;UBERON:0001042,4.65e-22,24;UBERON:0008814,4.65e-22,24;UBERON:0009145,4.65e-22,24;UBERON:0002193,4.88e-20,48;UBERON:0002405,4.88e-20,48;UBERON:0000077,9.41e-20,35;UBERON:0002390,1.67e-19,45;UBERON:0003061,1.67e-19,45;UBERON:0000072,3.70e-19,27;UBERON:0007811,2.26e-13,36;UBERON:0000065,2.88e-11,41;UBERON:0001004,6.61e-11,42;UBERON:0000153,1.46e-10,43;UBERON:0003081,1.72e-10,87;UBERON:0000490,1.76e-08,66;UBERON:0000926,2.02e-08,120;UBERON:0004120,2.02e-08,120;UBERON:0006603,2.02e-08,120;UBERON:0003929,1.93e-07,55;UBERON:0002384,3.72e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,6.89864738543167,0.936258105287974,2.73948749160808,0.478632953972018,5.9920255475922,2.01066925563694,0.333109761815663,0.607425802169478,0,1.10411757875383,2.33094537129756,0.84877930359606,0.0850432901510698,2.6808556824239,2.87319768052829,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,4.60384793810598,1.5626706890476,4.18818995179039,12.9410927366823,12.294818729252,6.79714494243615,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,6.99132285847364,0,0,0,0,0.150722640552623,0,0,0,0.86759614151947,2.65383165584962,0.323533699894818,1.32504911076236,3.39412677194655,0,0,0,0.510914110417183,0.479260498023681,0,1.14363204365758,0,0,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0,0.870848794270651,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0,0.899448449539415,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,1.48155621895769,0.941842285023455,1.6403307326523,1.83022538565218,0.509935289981566,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0,0,13.5884781870117,0.608175645870493,1.54066435747241,0.909445760844565,2.14832034800978,6.35780335300048,4.80781798079875,5.90758108698309,6.5628192466296,6.55378537232999,5.94874492307359,4.0932309910696,10.4870907387959,12.3889516312463,0.453460767230423,0,0,0,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr10:92587157..92587200,- | |||
}} |
Revision as of 17:59, 12 September 2013
Short description: | p@chr10:92587157..92587200, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:92587157..92587200, - |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.85e-17 | 12 |
lymphocyte | 1.97e-15 | 13 |
common lymphoid progenitor | 1.97e-15 | 13 |
T cell | 3.05e-15 | 11 |
pro-T cell | 3.05e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 5.67e-12 | 25 |
hematopoietic cell | 1.04e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.04e-11 | 32 |
hematopoietic stem cell | 1.04e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.04e-11 | 32 |
mature alpha-beta T cell | 1.36e-11 | 9 |
alpha-beta T cell | 1.36e-11 | 9 |
immature T cell | 1.36e-11 | 9 |
mature T cell | 1.36e-11 | 9 |
immature alpha-beta T cell | 1.36e-11 | 9 |
leukocyte | 2.55e-11 | 17 |
nongranular leukocyte | 2.55e-11 | 17 |
CD4-positive, alpha-beta T cell | 8.19e-10 | 8 |
connective tissue cell | 3.72e-07 | 46 |
mesenchymal cell | 3.72e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.52e-07 | 3 |
muscle cancer | 2.52e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.