FFCP PHASE1:Mm9::chr11:101108274..101108295,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54409|HGNC=|MCL_coexpression_id=259|UniProt=|association_with_transcript=27bp_to_ENSMUST00000138229_5end|description=CAGE_peak_4_at_Ramp2_5end|id=chr11:101108274..101108295,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.93e-13!147;UBERON:0009569!8.32e-12!66;UBERON:0003914!6.89e-11!47;UBERON:0000466!4.27e-10!79;UBERON:0005177!1.37e-09!85;UBERON:0007100!1.56e-09!18;UBERON:0000948!1.56e-09!18;UBERON:0005498!1.56e-09!18;UBERON:0004140!1.56e-09!18;UBERON:0009881!1.56e-09!18;UBERON:0004141!1.56e-09!18;UBERON:0003084!1.56e-09!18;UBERON:0007005!1.56e-09!18;UBERON:0004139!1.56e-09!18;UBERON:0004291!1.56e-09!18;UBERON:0000926!3.69e-09!193;UBERON:0004120!3.69e-09!193;UBERON:0006603!3.69e-09!193;UBERON:0005172!7.66e-08!49;UBERON:0005173!7.66e-08!49;UBERON:0002417!7.66e-08!49;UBERON:0000916!7.66e-08!49;UBERON:0004872!9.93e-08!33;UBERON:0004535!1.20e-07!23;UBERON:0001009!1.20e-07!23;UBERON:0002048!2.73e-07!14;UBERON:0000117!2.73e-07!14;UBERON:0000171!2.73e-07!14;UBERON:0000170!2.73e-07!14;UBERON:0005597!2.73e-07!14;UBERON:0000118!2.73e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.64e-16,47;UBERON:0001048,6.69e-16,134;UBERON:0007100,1.45e-15,18;UBERON:0000948,1.45e-15,18;UBERON:0005498,1.45e-15,18;UBERON:0004140,1.45e-15,18;UBERON:0009881,1.45e-15,18;UBERON:0004141,1.45e-15,18;UBERON:0003084,1.45e-15,18;UBERON:0007005,1.45e-15,18;UBERON:0004139,1.45e-15,18;UBERON:0004291,1.45e-15,18;UBERON:0004535,3.17e-13,23;UBERON:0001009,3.17e-13,23;UBERON:0009569,3.76e-10,66;UBERON:0005177,4.29e-10,79;UBERON:0004872,6.14e-10,33;UBERON:0000025,4.53e-08,114;UBERON:0002100,7.95e-08,90;UBERON:0002107,3.48e-07,22;UBERON:0007499,3.48e-07,22;UBERON:0006925,3.48e-07,22;UBERON:0009497,3.48e-07,22;UBERON:0000015,3.48e-07,22;UBERON:0002423,3.48e-07,22;UBERON:0006235,3.48e-07,22;UBERON:0008835,3.48e-07,22;UBERON:0003894,3.48e-07,22;UBERON:0004161,3.48e-07,22;UBERON:0008836,3.48e-07,22;UBERON:0004111,6.48e-07,122;UBERON:0002048,6.88e-07,14;UBERON:0000117,6.88e-07,14;UBERON:0000171,6.88e-07,14;UBERON:0000170,6.88e-07,14;UBERON:0005597,6.88e-07,14;UBERON:0000118,6.88e-07,14;UBERON:0009854,9.64e-07,23;UBERON:0009856,9.64e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.279972843250725,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0.0755715601067855,22.3195656300292,12.9063581547208,0,0,0,0.448026887097336,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.91347103775248,0.517875767294343,0.148442139064825,1.21439728736295,0.913396434936424,1.15307748628029,0.60289056221049,1.41106448562846,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.611036183101898,0.124406970610093,0,1.47309299120532,0.260240885925407,0.459804208866946,0.540186389416048,0.452114453507145,1.90502197623718,1.2811372028485,1.59292931751539,4.13925393182425,1.07783996466421,0,0,0.43839146485515,0,0.696504333044333,0.411564272815887,2.38841120182192,0,0,0,5.59239585845855,7.97388603935727,4.14142741360334,5.44512891845984,2.75469924446365,3.70241070929708,1.86027155800326,2.95100741539581,4.32031766758527,1.48103864922132,1.47750717671186,1.37816976227955,1.60819986167866,1.09775057645525,1.61047702512446,0,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.760902504450237,0,0.494096864172033,0,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0,1.70701110857774,1.37098215131675,0,0.407302655690628,1.35766741017338,0.841629838683823,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,5.63259991465583,1.16791574001266,0.589676985339609,0.674586337154561,0.202860121388503,0.964708639009667,0.25462585178142,1.43848068725405,1.78348749452539,1.64736847912849,0,7.07067800570156,1.24815069245824,2.27320990152401,1.61457672169721,2.8946611281802,2.21703828199926,0.947457058852424,0.488894929326078,0.509235257325564,1.64283173801951,1.17254380209271,0.476087281772027,6.63454402716516,2.20689201748667,2.43611158613652,1.43509291791738,2.29408640602033,0.863424909329478,1.73578870297814,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,2.13678724400706,0.162886959353576,0,0,0.242780636154981,0,0,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0.540183282093931,0.905510786479282,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,1.45317984026315,0.180938774784468,0.477489376012546,0,0,0,0.170870880797853,1.03193433981611,1.29636169158798,0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| ||
|EntrezGene=54409 | |||
|HGNC= | |||
|MCL_coexpression_id=259 | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENSMUST00000138229_5end | |||
|description=CAGE_peak_4_at_Ramp2_5end | |||
|id=chr11:101108274..101108295,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.93e-13!147;UBERON:0009569!8.32e-12!66;UBERON:0003914!6.89e-11!47;UBERON:0000466!4.27e-10!79;UBERON:0005177!1.37e-09!85;UBERON:0007100!1.56e-09!18;UBERON:0000948!1.56e-09!18;UBERON:0005498!1.56e-09!18;UBERON:0004140!1.56e-09!18;UBERON:0009881!1.56e-09!18;UBERON:0004141!1.56e-09!18;UBERON:0003084!1.56e-09!18;UBERON:0007005!1.56e-09!18;UBERON:0004139!1.56e-09!18;UBERON:0004291!1.56e-09!18;UBERON:0000926!3.69e-09!193;UBERON:0004120!3.69e-09!193;UBERON:0006603!3.69e-09!193;UBERON:0005172!7.66e-08!49;UBERON:0005173!7.66e-08!49;UBERON:0002417!7.66e-08!49;UBERON:0000916!7.66e-08!49;UBERON:0004872!9.93e-08!33;UBERON:0004535!1.20e-07!23;UBERON:0001009!1.20e-07!23;UBERON:0002048!2.73e-07!14;UBERON:0000117!2.73e-07!14;UBERON:0000171!2.73e-07!14;UBERON:0000170!2.73e-07!14;UBERON:0005597!2.73e-07!14;UBERON:0000118!2.73e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.64e-16,47;UBERON:0001048,6.69e-16,134;UBERON:0007100,1.45e-15,18;UBERON:0000948,1.45e-15,18;UBERON:0005498,1.45e-15,18;UBERON:0004140,1.45e-15,18;UBERON:0009881,1.45e-15,18;UBERON:0004141,1.45e-15,18;UBERON:0003084,1.45e-15,18;UBERON:0007005,1.45e-15,18;UBERON:0004139,1.45e-15,18;UBERON:0004291,1.45e-15,18;UBERON:0004535,3.17e-13,23;UBERON:0001009,3.17e-13,23;UBERON:0009569,3.76e-10,66;UBERON:0005177,4.29e-10,79;UBERON:0004872,6.14e-10,33;UBERON:0000025,4.53e-08,114;UBERON:0002100,7.95e-08,90;UBERON:0002107,3.48e-07,22;UBERON:0007499,3.48e-07,22;UBERON:0006925,3.48e-07,22;UBERON:0009497,3.48e-07,22;UBERON:0000015,3.48e-07,22;UBERON:0002423,3.48e-07,22;UBERON:0006235,3.48e-07,22;UBERON:0008835,3.48e-07,22;UBERON:0003894,3.48e-07,22;UBERON:0004161,3.48e-07,22;UBERON:0008836,3.48e-07,22;UBERON:0004111,6.48e-07,122;UBERON:0002048,6.88e-07,14;UBERON:0000117,6.88e-07,14;UBERON:0000171,6.88e-07,14;UBERON:0000170,6.88e-07,14;UBERON:0005597,6.88e-07,14;UBERON:0000118,6.88e-07,14;UBERON:0009854,9.64e-07,23;UBERON:0009856,9.64e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.279972843250725,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0.0755715601067855,22.3195656300292,12.9063581547208,0,0,0,0.448026887097336,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.91347103775248,0.517875767294343,0.148442139064825,1.21439728736295,0.913396434936424,1.15307748628029,0.60289056221049,1.41106448562846,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.611036183101898,0.124406970610093,0,1.47309299120532,0.260240885925407,0.459804208866946,0.540186389416048,0.452114453507145,1.90502197623718,1.2811372028485,1.59292931751539,4.13925393182425,1.07783996466421,0,0,0.43839146485515,0,0.696504333044333,0.411564272815887,2.38841120182192,0,0,0,5.59239585845855,7.97388603935727,4.14142741360334,5.44512891845984,2.75469924446365,3.70241070929708,1.86027155800326,2.95100741539581,4.32031766758527,1.48103864922132,1.47750717671186,1.37816976227955,1.60819986167866,1.09775057645525,1.61047702512446,0,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.760902504450237,0,0.494096864172033,0,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0,1.70701110857774,1.37098215131675,0,0.407302655690628,1.35766741017338,0.841629838683823,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,5.63259991465583,1.16791574001266,0.589676985339609,0.674586337154561,0.202860121388503,0.964708639009667,0.25462585178142,1.43848068725405,1.78348749452539,1.64736847912849,0,7.07067800570156,1.24815069245824,2.27320990152401,1.61457672169721,2.8946611281802,2.21703828199926,0.947457058852424,0.488894929326078,0.509235257325564,1.64283173801951,1.17254380209271,0.476087281772027,6.63454402716516,2.20689201748667,2.43611158613652,1.43509291791738,2.29408640602033,0.863424909329478,1.73578870297814,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,2.13678724400706,0.162886959353576,0,0,0.242780636154981,0,0,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0.540183282093931,0.905510786479282,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,1.45317984026315,0.180938774784468,0.477489376012546,0,0,0,0.170870880797853,1.03193433981611,1.29636169158798,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0.316335993581135,1.01659733563424,0.972048067396211,0.627264888043406,1.09181281873089,0.269728692769641,0.743881101528023,0.523511883968059,0.129614973291793,0.621339313086926,0,5.08356256549528,3.64008679005615,0.972255941720238,1.6790777052105,0.844780627453891,1.17357238645754,0.5208175393758,0.209718688851422,0,0,0,0.810900861160657,0.205421914329655,0.389762468933385,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,1.28206136987086,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.320125762024346,0.287177344778066,0.476293691283074,0.463537303779422,0,0.824171801606613,0.294397840268795,0.685738504770831,0,0.476872379894642,0.436039249896986,0.282328141245992,0.338458431566706,0.73171189149109,0.526139422875686,0.135804113845862,0,0.474540072496697,0.394017929502254,0.818462086339379,0.154936841185966,0.771626443924566,0.249810577937946,1.40358965067245,1.28922632428979,0.57386499620653,1.76473135295612,0.231867835620421 | |||
|short_description=p4@Ramp2 | |||
}} |
Revision as of 18:14, 12 September 2013
Short description: | p4@Ramp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ramp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | 27bp_to_ENSMUST00000138229_5end |
EntrezGene: | Ramp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.