FFCP PHASE1:Mm9::chr11:104442953..104443000,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17896|HGNC=|MCL_coexpression_id=1942|UniProt=|association_with_transcript=-352bp_to_ENSMUST00000155271_5end|description=CAGE_peak_3_at_Myl4_5end|id=chr11:104442953..104443000,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,4.43e-19,32;CL:0002032,4.43e-19,32;CL:0000037,4.43e-19,32;CL:0000837,4.43e-19,32;CL:0002031,2.63e-12,25;CL:0000838,2.94e-12,12;CL:0002320,4.94e-12,46;CL:0000134,4.94e-12,46;CL:0000542,3.31e-11,13;CL:0000051,3.31e-11,13;CL:0000084,3.76e-10,11;CL:0000827,3.76e-10,11;CL:0000219,1.16e-09,54;CL:0000049,2.71e-09,19;CL:0000738,3.07e-08,17;CL:0002087,3.07e-08,17;CL:0000553,2.70e-07,6;CL:0000556,2.70e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.04e-11!42;UBERON:0000065!2.96e-11!41;UBERON:0002048!2.52e-09!14;UBERON:0000117!2.52e-09!14;UBERON:0000171!2.52e-09!14;UBERON:0000170!2.52e-09!14;UBERON:0005597!2.52e-09!14;UBERON:0000118!2.52e-09!14;UBERON:0002193!5.05e-09!48;UBERON:0002390!7.67e-08!45;UBERON:0003061!7.67e-08!45;UBERON:0005153!9.88e-08!17;UBERON:0004177!2.70e-07!29;UBERON:0001041!8.00e-07!92;UBERON:0003408!8.99e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.78e-14,48;UBERON:0002405,5.78e-14,48;UBERON:0002390,1.59e-13,45;UBERON:0003061,1.59e-13,45;UBERON:0000065,9.24e-13,41;UBERON:0001004,2.30e-12,42;UBERON:0002384,4.94e-12,46;UBERON:0004177,1.71e-09,29;UBERON:0005057,1.71e-09,29;UBERON:0002370,1.23e-08,23;UBERON:0000974,1.23e-08,23;UBERON:0004807,1.23e-08,23;UBERON:0005058,1.23e-08,23;UBERON:0003351,1.23e-08,23;UBERON:0009113,1.23e-08,23;UBERON:0003295,1.23e-08,23;UBERON:0009722,1.23e-08,23;UBERON:0005562,1.23e-08,23;UBERON:0007690,1.23e-08,23;UBERON:0006562,3.38e-08,24;UBERON:0003408,3.38e-08,24;UBERON:0001557,3.38e-08,24;UBERON:0001042,3.38e-08,24;UBERON:0008814,3.38e-08,24;UBERON:0009145,3.38e-08,24;UBERON:0000077,1.92e-07,35;UBERON:0000072,4.48e-07,27;UBERON:0002048,4.58e-07,14;UBERON:0000117,4.58e-07,14;UBERON:0000171,4.58e-07,14;UBERON:0000170,4.58e-07,14;UBERON:0005597,4.58e-07,14;UBERON:0000118,4.58e-07,14|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0,0,0,2.9104124088305,1.13646523144697,0.333109761815663,1.41732687172878,0.699561878128147,8.51747846467242,6.30726394586398,11.8829102503448,0.17008658030214,3.77305614563364,7.57479388502913,0.319984845586813,0.45881856213434,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5903910906766,5.07753499407941,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0.520455980298408,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.510914110417183,2.75574786363617,4.79922184794726,2.41433431438823,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.02939162845886,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,1.10851914099963,1.13694847062291,0.814824882210129,1.35796068620151,0.704070744865506,1.00503754465089,0.714130922658041,0.195133647857799,0.945810864637146,0.664394068946325,0.797273843287435,2.13022309130459,2.76295970985433,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0.874442509889552,0,2.05045056957423,0,0,0.565105371014073,0.683471138605126,1.83022538565218,1.35982743995084,1.53946597556024,1.93479963326193,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.576060012515731,0.948033361884535,4.05450430580328,6.16265742988964,3.63778304337826,2.32734704367726,1.39076948346885,1.08175904567972,2.06765338044408,1.31256384932592,0.762068066549998,0.806609481094724,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p3@Myl4}} | ||
|EntrezGene=17896 | |||
|HGNC= | |||
|MCL_coexpression_id=1942 | |||
|UniProt= | |||
|association_with_transcript=-352bp_to_ENSMUST00000155271_5end | |||
|description=CAGE_peak_3_at_Myl4_5end | |||
|id=chr11:104442953..104443000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.43e-19,32;CL:0002032,4.43e-19,32;CL:0000037,4.43e-19,32;CL:0000837,4.43e-19,32;CL:0002031,2.63e-12,25;CL:0000838,2.94e-12,12;CL:0002320,4.94e-12,46;CL:0000134,4.94e-12,46;CL:0000542,3.31e-11,13;CL:0000051,3.31e-11,13;CL:0000084,3.76e-10,11;CL:0000827,3.76e-10,11;CL:0000219,1.16e-09,54;CL:0000049,2.71e-09,19;CL:0000738,3.07e-08,17;CL:0002087,3.07e-08,17;CL:0000553,2.70e-07,6;CL:0000556,2.70e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.04e-11!42;UBERON:0000065!2.96e-11!41;UBERON:0002048!2.52e-09!14;UBERON:0000117!2.52e-09!14;UBERON:0000171!2.52e-09!14;UBERON:0000170!2.52e-09!14;UBERON:0005597!2.52e-09!14;UBERON:0000118!2.52e-09!14;UBERON:0002193!5.05e-09!48;UBERON:0002390!7.67e-08!45;UBERON:0003061!7.67e-08!45;UBERON:0005153!9.88e-08!17;UBERON:0004177!2.70e-07!29;UBERON:0001041!8.00e-07!92;UBERON:0003408!8.99e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.78e-14,48;UBERON:0002405,5.78e-14,48;UBERON:0002390,1.59e-13,45;UBERON:0003061,1.59e-13,45;UBERON:0000065,9.24e-13,41;UBERON:0001004,2.30e-12,42;UBERON:0002384,4.94e-12,46;UBERON:0004177,1.71e-09,29;UBERON:0005057,1.71e-09,29;UBERON:0002370,1.23e-08,23;UBERON:0000974,1.23e-08,23;UBERON:0004807,1.23e-08,23;UBERON:0005058,1.23e-08,23;UBERON:0003351,1.23e-08,23;UBERON:0009113,1.23e-08,23;UBERON:0003295,1.23e-08,23;UBERON:0009722,1.23e-08,23;UBERON:0005562,1.23e-08,23;UBERON:0007690,1.23e-08,23;UBERON:0006562,3.38e-08,24;UBERON:0003408,3.38e-08,24;UBERON:0001557,3.38e-08,24;UBERON:0001042,3.38e-08,24;UBERON:0008814,3.38e-08,24;UBERON:0009145,3.38e-08,24;UBERON:0000077,1.92e-07,35;UBERON:0000072,4.48e-07,27;UBERON:0002048,4.58e-07,14;UBERON:0000117,4.58e-07,14;UBERON:0000171,4.58e-07,14;UBERON:0000170,4.58e-07,14;UBERON:0005597,4.58e-07,14;UBERON:0000118,4.58e-07,14 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0,0,0,2.9104124088305,1.13646523144697,0.333109761815663,1.41732687172878,0.699561878128147,8.51747846467242,6.30726394586398,11.8829102503448,0.17008658030214,3.77305614563364,7.57479388502913,0.319984845586813,0.45881856213434,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5903910906766,5.07753499407941,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0.520455980298408,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.510914110417183,2.75574786363617,4.79922184794726,2.41433431438823,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.02939162845886,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,1.10851914099963,1.13694847062291,0.814824882210129,1.35796068620151,0.704070744865506,1.00503754465089,0.714130922658041,0.195133647857799,0.945810864637146,0.664394068946325,0.797273843287435,2.13022309130459,2.76295970985433,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0.874442509889552,0,2.05045056957423,0,0,0.565105371014073,0.683471138605126,1.83022538565218,1.35982743995084,1.53946597556024,1.93479963326193,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.576060012515731,0.948033361884535,4.05450430580328,6.16265742988964,3.63778304337826,2.32734704367726,1.39076948346885,1.08175904567972,2.06765338044408,1.31256384932592,0.762068066549998,0.806609481094724,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p3@Myl4 | |||
}} |
Revision as of 18:28, 12 September 2013
Short description: | p3@Myl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Myl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1942 |
Association with transcript: | -352bp_to_ENSMUST00000155271_5end |
EntrezGene: | Myl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.43e-19 | 32 |
hematopoietic oligopotent progenitor cell | 4.43e-19 | 32 |
hematopoietic stem cell | 4.43e-19 | 32 |
hematopoietic multipotent progenitor cell | 4.43e-19 | 32 |
hematopoietic lineage restricted progenitor cell | 2.63e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.94e-12 | 12 |
connective tissue cell | 4.94e-12 | 46 |
mesenchymal cell | 4.94e-12 | 46 |
lymphocyte | 3.31e-11 | 13 |
common lymphoid progenitor | 3.31e-11 | 13 |
T cell | 3.76e-10 | 11 |
pro-T cell | 3.76e-10 | 11 |
motile cell | 1.16e-09 | 54 |
common myeloid progenitor | 2.71e-09 | 19 |
leukocyte | 3.07e-08 | 17 |
nongranular leukocyte | 3.07e-08 | 17 |
megakaryocyte progenitor cell | 2.70e-07 | 6 |
megakaryocyte | 2.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.78e-14 | 48 |
immune system | 5.78e-14 | 48 |
hematopoietic system | 1.59e-13 | 45 |
blood island | 1.59e-13 | 45 |
respiratory tract | 9.24e-13 | 41 |
respiratory system | 2.30e-12 | 42 |
connective tissue | 4.94e-12 | 46 |
hemopoietic organ | 1.71e-09 | 29 |
immune organ | 1.71e-09 | 29 |
thymus | 1.23e-08 | 23 |
neck | 1.23e-08 | 23 |
respiratory system epithelium | 1.23e-08 | 23 |
hemolymphoid system gland | 1.23e-08 | 23 |
pharyngeal epithelium | 1.23e-08 | 23 |
thymic region | 1.23e-08 | 23 |
pharyngeal gland | 1.23e-08 | 23 |
entire pharyngeal arch endoderm | 1.23e-08 | 23 |
thymus primordium | 1.23e-08 | 23 |
early pharyngeal endoderm | 1.23e-08 | 23 |
pharynx | 3.38e-08 | 24 |
gland of gut | 3.38e-08 | 24 |
upper respiratory tract | 3.38e-08 | 24 |
chordate pharynx | 3.38e-08 | 24 |
pharyngeal arch system | 3.38e-08 | 24 |
pharyngeal region of foregut | 3.38e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 1.92e-07 | 35 |
segment of respiratory tract | 4.48e-07 | 27 |
lung | 4.58e-07 | 14 |
respiratory tube | 4.58e-07 | 14 |
respiration organ | 4.58e-07 | 14 |
pair of lungs | 4.58e-07 | 14 |
lung primordium | 4.58e-07 | 14 |
lung bud | 4.58e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.