FFCP PHASE1:Mm9::chr11:3831508..3831547,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=181|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:3831508..3831547,-|id=chr11:3831508..3831547,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.07e-19!66;UBERON:0005172!3.40e-17!49;UBERON:0005173!3.40e-17!49;UBERON:0002417!3.40e-17!49;UBERON:0000916!3.40e-17!49;UBERON:0005177!2.89e-14!85;UBERON:0002100!1.53e-10!98;UBERON:0002365!3.54e-09!25;UBERON:0002330!3.54e-09!25;UBERON:0002107!1.01e-07!22;UBERON:0007499!1.01e-07!22;UBERON:0006925!1.01e-07!22;UBERON:0009497!1.01e-07!22;UBERON:0000015!1.01e-07!22;UBERON:0002423!1.01e-07!22;UBERON:0006235!1.01e-07!22;UBERON:0008835!1.01e-07!22;UBERON:0003894!1.01e-07!22;UBERON:0004161!1.01e-07!22;UBERON:0008836!1.01e-07!22;UBERON:0009854!1.24e-07!23;UBERON:0009856!1.24e-07!23;UBERON:0000466!4.81e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0009569,5.82e-20,66;UBERON:0005172,1.77e-17,49;UBERON:0005173,1.77e-17,49;UBERON:0002417,1.77e-17,49;UBERON:0000916,1.77e-17,49;UBERON:0005177,1.71e-16,79;UBERON:0002100,1.07e-12,90;UBERON:0003104,2.03e-10,61;UBERON:0009142,2.03e-10,61;UBERON:0002365,8.67e-10,25;UBERON:0002330,8.67e-10,25;UBERON:0002107,3.65e-08,22;UBERON:0007499,3.65e-08,22;UBERON:0006925,3.65e-08,22;UBERON:0009497,3.65e-08,22;UBERON:0000015,3.65e-08,22;UBERON:0002423,3.65e-08,22;UBERON:0006235,3.65e-08,22;UBERON:0008835,3.65e-08,22;UBERON:0003894,3.65e-08,22;UBERON:0004161,3.65e-08,22;UBERON:0008836,3.65e-08,22;UBERON:0009854,4.50e-08,23;UBERON:0009856,4.50e-08,23|phase1_expression=0.160148847104794,6.63053274514786,5.91499011206397,2.41971369045464,2.00358291978539,0.16787927191189,0,0.516493293766305,0,0,0,0,0,0,3.66420737997229,4.85940641735582,1.39912375625629,0,0.137114433605739,1.69755860719212,87.2544156949976,0,0,1.91990907352088,1.14704640533585,0.57423196411502,2.58457197695445,2.37018355954478,11.7814520062952,4.78857246543868,2.88249663851896,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0.101376931219515,0.183546752161682,5.47673941043627,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0.335565212115473,0,0,1.54355661621568,1.14613375975503,0,0.202316460859598,0,0,0.338844532069132,0,4.49949858640699,6.92206453796882,3.5524005747305,0.299600110518405,2.30530983192933,0,0.270011876663381,0,1.42825492201902,1.10434270475807,0,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.457438218012048,0,2.23346399201105,0.56276261003168,1.5279824777681,0,0.284743361598206,0.186399445825301,0.151452386666368,0.529000920747499,385.519769973231,113.575951761543,1.3599426674155,1.61910957491345,7.14754059192436,4.03224198387602,53.790212910461,0.340860645156116,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,59.8323529727874,39.8764340816644,24.0476265285016,3.12273588179045,21.617048960162,24.2146272118861,29.8430828294193,39.1570394761897,23.8766523526383,21.0115722574218,5.35017620603673,8.84610551949874,3.88240439873782,9.93786833071771,13.091631834651,1.86391761218122,0.585561594023094,1.46612694769419,4.34276993854605,0.239630249011841,0,0.127070227073065,1.19832511523858,0.457500602818626,0.125654352112864,0.347648640384553,1.53429274398198,0.62336413367868,2.75810147215188,0.81471491080253,12.5651040316194,0.758168275301024,1.68353484709179,0.390361328888111,0,0,0.60281927134286,1.49680298132921,0.512454881139399,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0.657587197282725,0.278047249225598,0,0.411564272815887,0.995171334092466,0,0.257347907114715,1.70498099637356,0.414251545071004,1.17263029990548,0.720248245844059,1.18372367792605,1.57411385397923,2.62254091908543,2.55787339225449,2.14618721119695,5.95503246072564,0.987359099480883,1.14917224855367,3.08061476274252,3.07019973593198,1.97595103761946,9.5286557319864,0.420579897128254,2.05809224758569,9.25172592354634,5.02456076660734,0.213288250535234,0.464473343720877,0.128867461322093,1.21010114774006,0.667134131534611,3.04361001780095,6.16887780007865,6.25856027951241,2.76468729680296,5.57078121715222,2.9244613067868,6.29173586057955,4.10662294761919,5.97423819763102,0.758671603812327,2.39921876480431,6.76246414038483,10.1825663922657,17.8436288194216,29.7375876334951,94.6650960750132,148.3481987195,210.378295307442,258.023469760485,38.2423888942422,0.667380422864376,2.35870794135844,1.57403478669398,2.23146133527353,6.02942899381042,8.91190481234969,11.5078454980324,19.1319567594542,14.5517548989683,10.0637744569148,21.5841749647732,20.594486425561,23.4898356490814,27.0890094418087,38.5954817090694,83.3236887651387,0.568474235311454,0.488894929326078,1.35796068620151,2.11221223459652,7.37027532743989,39.9913316688503,79.4193946781241,10.8768249433272,16.1669223443606,16.7427507090361,93.5659527026864,53.1869744146958,181.968515695542,0,1.087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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=181 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:3831508..3831547,- | |||
|id=chr11:3831508..3831547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.07e-19!66;UBERON:0005172!3.40e-17!49;UBERON:0005173!3.40e-17!49;UBERON:0002417!3.40e-17!49;UBERON:0000916!3.40e-17!49;UBERON:0005177!2.89e-14!85;UBERON:0002100!1.53e-10!98;UBERON:0002365!3.54e-09!25;UBERON:0002330!3.54e-09!25;UBERON:0002107!1.01e-07!22;UBERON:0007499!1.01e-07!22;UBERON:0006925!1.01e-07!22;UBERON:0009497!1.01e-07!22;UBERON:0000015!1.01e-07!22;UBERON:0002423!1.01e-07!22;UBERON:0006235!1.01e-07!22;UBERON:0008835!1.01e-07!22;UBERON:0003894!1.01e-07!22;UBERON:0004161!1.01e-07!22;UBERON:0008836!1.01e-07!22;UBERON:0009854!1.24e-07!23;UBERON:0009856!1.24e-07!23;UBERON:0000466!4.81e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,5.82e-20,66;UBERON:0005172,1.77e-17,49;UBERON:0005173,1.77e-17,49;UBERON:0002417,1.77e-17,49;UBERON:0000916,1.77e-17,49;UBERON:0005177,1.71e-16,79;UBERON:0002100,1.07e-12,90;UBERON:0003104,2.03e-10,61;UBERON:0009142,2.03e-10,61;UBERON:0002365,8.67e-10,25;UBERON:0002330,8.67e-10,25;UBERON:0002107,3.65e-08,22;UBERON:0007499,3.65e-08,22;UBERON:0006925,3.65e-08,22;UBERON:0009497,3.65e-08,22;UBERON:0000015,3.65e-08,22;UBERON:0002423,3.65e-08,22;UBERON:0006235,3.65e-08,22;UBERON:0008835,3.65e-08,22;UBERON:0003894,3.65e-08,22;UBERON:0004161,3.65e-08,22;UBERON:0008836,3.65e-08,22;UBERON:0009854,4.50e-08,23;UBERON:0009856,4.50e-08,23 | |||
|phase1_expression=0.160148847104794,6.63053274514786,5.91499011206397,2.41971369045464,2.00358291978539,0.16787927191189,0,0.516493293766305,0,0,0,0,0,0,3.66420737997229,4.85940641735582,1.39912375625629,0,0.137114433605739,1.69755860719212,87.2544156949976,0,0,1.91990907352088,1.14704640533585,0.57423196411502,2.58457197695445,2.37018355954478,11.7814520062952,4.78857246543868,2.88249663851896,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0,0.101376931219515,0.183546752161682,5.47673941043627,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0.335565212115473,0,0,1.54355661621568,1.14613375975503,0,0.202316460859598,0,0,0.338844532069132,0,4.49949858640699,6.92206453796882,3.5524005747305,0.299600110518405,2.30530983192933,0,0.270011876663381,0,1.42825492201902,1.10434270475807,0,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.457438218012048,0,2.23346399201105,0.56276261003168,1.5279824777681,0,0.284743361598206,0.186399445825301,0.151452386666368,0.529000920747499,385.519769973231,113.575951761543,1.3599426674155,1.61910957491345,7.14754059192436,4.03224198387602,53.790212910461,0.340860645156116,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,59.8323529727874,39.8764340816644,24.0476265285016,3.12273588179045,21.617048960162,24.2146272118861,29.8430828294193,39.1570394761897,23.8766523526383,21.0115722574218,5.35017620603673,8.84610551949874,3.88240439873782,9.93786833071771,13.091631834651,1.86391761218122,0.585561594023094,1.46612694769419,4.34276993854605,0.239630249011841,0,0.127070227073065,1.19832511523858,0.457500602818626,0.125654352112864,0.347648640384553,1.53429274398198,0.62336413367868,2.75810147215188,0.81471491080253,12.5651040316194,0.758168275301024,1.68353484709179,0.390361328888111,0,0,0.60281927134286,1.49680298132921,0.512454881139399,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0.657587197282725,0.278047249225598,0,0.411564272815887,0.995171334092466,0,0.257347907114715,1.70498099637356,0.414251545071004,1.17263029990548,0.720248245844059,1.18372367792605,1.57411385397923,2.62254091908543,2.55787339225449,2.14618721119695,5.95503246072564,0.987359099480883,1.14917224855367,3.08061476274252,3.07019973593198,1.97595103761946,9.5286557319864,0.420579897128254,2.05809224758569,9.25172592354634,5.02456076660734,0.213288250535234,0.464473343720877,0.128867461322093,1.21010114774006,0.667134131534611,3.04361001780095,6.16887780007865,6.25856027951241,2.76468729680296,5.57078121715222,2.9244613067868,6.29173586057955,4.10662294761919,5.97423819763102,0.758671603812327,2.39921876480431,6.76246414038483,10.1825663922657,17.8436288194216,29.7375876334951,94.6650960750132,148.3481987195,210.378295307442,258.023469760485,38.2423888942422,0.667380422864376,2.35870794135844,1.57403478669398,2.23146133527353,6.02942899381042,8.91190481234969,11.5078454980324,19.1319567594542,14.5517548989683,10.0637744569148,21.5841749647732,20.594486425561,23.4898356490814,27.0890094418087,38.5954817090694,83.3236887651387,0.568474235311454,0.488894929326078,1.35796068620151,2.11221223459652,7.37027532743989,39.9913316688503,79.4193946781241,10.8768249433272,16.1669223443606,16.7427507090361,93.5659527026864,53.1869744146958,181.968515695542,0,1.08781136763742,50.6517201209607,5.24279817978992,0.642202359951168,4.33683240391152,0,5.55436039849621,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,2.41298144854057,1.06839362200353,0.977321756121456,1.64970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,3.10113951801865,0.727067458955011,1.78248689192361,2.21225730555071,3.16255825724996,3.09406629744561,3.74483566329167,0.900305470156551,0.388076051348264,0.428674070063185,1.24138163549592,3.21063871683727,4.60737257685939,13.0919928119278,33.0887108369832,14.192748747876,0.661585194164886,0.65954501176592,2.9063596805263,0.72375509913787,0.238744688006273,0.328281799490123,5.24665505933731,0.741701208042039,12.815316059839,4.33412422722767,12.4080333337707,13.1857919903284,7.65487675237741,11.4389086603261,0,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,0.609958401380546,0.216010681643603,0,1.9652630737156,0.674321731924103,1.98368293740806,0,1.16653475962614,118.675808799603,1.12738587736838,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0.104859344425711,0.241584120826006,1.15212002503146,0.316011120628178,0,0.718976700153791,0.51968329191118,0.895133478337407,0.596044064343795,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.487289403698762,0.288635524920988,0.467507608726276,3.62768613784338,0,0.269141569828427,0.503653849092235,3.09103350451505,5.44279178808428,0.549454872801795,1.07184189539533,1.00314420807073,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| |||
|short_description=p@chr11:3831508..3831547,- | |||
}} |
Revision as of 19:36, 12 September 2013
Short description: | p@chr11:3831508..3831547, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:3831508..3831547, - |
Coexpression cluster: | MCL_coexpression_mm9:181 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 5.82e-20 | 66 |
abdomen element | 1.77e-17 | 49 |
abdominal segment element | 1.77e-17 | 49 |
abdominal segment of trunk | 1.77e-17 | 49 |
abdomen | 1.77e-17 | 49 |
trunk region element | 1.71e-16 | 79 |
trunk | 1.07e-12 | 90 |
mesenchyme | 2.03e-10 | 61 |
entire embryonic mesenchyme | 2.03e-10 | 61 |
exocrine gland | 8.67e-10 | 25 |
exocrine system | 8.67e-10 | 25 |
liver | 3.65e-08 | 22 |
epithelial sac | 3.65e-08 | 22 |
digestive gland | 3.65e-08 | 22 |
epithelium of foregut-midgut junction | 3.65e-08 | 22 |
anatomical boundary | 3.65e-08 | 22 |
hepatobiliary system | 3.65e-08 | 22 |
foregut-midgut junction | 3.65e-08 | 22 |
hepatic diverticulum | 3.65e-08 | 22 |
liver primordium | 3.65e-08 | 22 |
septum transversum | 3.65e-08 | 22 |
liver bud | 3.65e-08 | 22 |
digestive tract diverticulum | 4.50e-08 | 23 |
sac | 4.50e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.