FFCP PHASE1:Mm9::chr11:59263632..59263642,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=194952|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=9bp_to_ENSMUST00000126158_5end|description=CAGE_peak_3_at_Jmjd4_5end|id=chr11:59263632..59263642,+|ontology_enrichment_celltype=CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-15,23;CL:0000337,4.42e-15,23;CL:0002612,8.26e-11,3;CL:0000540,6.85e-10,33;CL:0000047,6.85e-10,33;CL:0000031,6.85e-10,33;CL:0000404,6.85e-10,33;CL:0000393,4.66e-08,39;CL:0000211,4.66e-08,39;CL:0002611,1.46e-07,2;CL:0002319,4.02e-07,43;CL:0000221,6.47e-07,44;CL:0000133,6.47e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.41e-14!52;UBERON:0005068!1.41e-14!52;UBERON:0006241!1.41e-14!52;UBERON:0007135!1.41e-14!52;UBERON:0000955!3.32e-13!50;UBERON:0006238!3.32e-13!50;UBERON:0002616!9.95e-13!49;UBERON:0001017!2.94e-12!73;UBERON:0005743!2.94e-12!73;UBERON:0000073!9.90e-12!75;UBERON:0001016!9.90e-12!75;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0002020!3.35e-11!34;UBERON:0000033!3.76e-11!63;UBERON:0003080!1.21e-10!40;UBERON:0004121!2.16e-10!102;UBERON:0000924!2.16e-10!102;UBERON:0006601!2.16e-10!102;UBERON:0002780!3.66e-10!39;UBERON:0001890!3.66e-10!39;UBERON:0006240!3.66e-10!39;UBERON:0003056!3.70e-09!49;UBERON:0002791!4.42e-08!29;UBERON:0003528!4.42e-08!29;UBERON:0001893!4.42e-08!29;UBERON:0000153!3.01e-07!94;UBERON:0007811!5.00e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.34e-28,34;UBERON:0000073,5.70e-23,54;UBERON:0002021,1.71e-20,10;UBERON:0000411,1.71e-20,10;UBERON:0001950,1.71e-20,10;UBERON:0001017,1.31e-19,73;UBERON:0001049,3.37e-19,52;UBERON:0005068,3.37e-19,52;UBERON:0006241,3.37e-19,52;UBERON:0007135,3.37e-19,52;UBERON:0001016,5.71e-19,75;UBERON:0001948,9.84e-17,5;UBERON:0002315,9.84e-17,5;UBERON:0003528,1.40e-16,29;UBERON:0002791,1.40e-16,29;UBERON:0001893,1.40e-16,29;UBERON:0002346,7.13e-15,64;UBERON:0003075,7.13e-15,64;UBERON:0007284,7.13e-15,64;UBERON:0002619,1.56e-14,17;UBERON:0000956,4.58e-14,21;UBERON:0001869,4.58e-14,21;UBERON:0000203,4.58e-14,21;UBERON:0004121,4.91e-14,95;UBERON:0000924,4.91e-14,95;UBERON:0006601,4.91e-14,95;UBERON:0002240,6.66e-14,6;UBERON:0005174,6.66e-14,6;UBERON:0001137,6.66e-14,6;UBERON:0002780,9.92e-14,39;UBERON:0001890,9.92e-14,39;UBERON:0006240,9.92e-14,39;UBERON:0003080,2.57e-13,40;UBERON:0010371,1.46e-12,73;UBERON:0002616,3.27e-11,46;UBERON:0000955,6.50e-11,47;UBERON:0006238,6.50e-11,47;UBERON:0002257,8.26e-11,3;UBERON:0010314,2.30e-10,92;UBERON:0003056,2.36e-10,49;UBERON:0000025,1.39e-07,114;UBERON:0002256,1.46e-07,2;UBERON:0004111,8.06e-07,122;UBERON:0003076,8.45e-07,12;UBERON:0003057,8.45e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,2.28520787523043,1.32521124570968,0.489963196859816,0.191690942036473,0,2.20231761998777,1.40456071893706,0.921639199537461,1.05509030184155,1.28082701043374,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,3.24091444021034,1.56608848879013,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0,0.11981512450592,0,0,0.748953197024114,0.457500602818626,2.26177833803156,1.21677024134594,1.53429274398198,1.87009240103604,0.973447578406546,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0.136072998302656,0.896796041993948,0.374806898238915,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0,1.3173006917463,0,1.47202963994889,0.514523061896422,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.280543279561274,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0,0.405720242777006,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768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| ||
|EntrezGene=194952 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000126158_5end | |||
|description=CAGE_peak_3_at_Jmjd4_5end | |||
|id=chr11:59263632..59263642,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-15,23;CL:0000337,4.42e-15,23;CL:0002612,8.26e-11,3;CL:0000540,6.85e-10,33;CL:0000047,6.85e-10,33;CL:0000031,6.85e-10,33;CL:0000404,6.85e-10,33;CL:0000393,4.66e-08,39;CL:0000211,4.66e-08,39;CL:0002611,1.46e-07,2;CL:0002319,4.02e-07,43;CL:0000221,6.47e-07,44;CL:0000133,6.47e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.41e-14!52;UBERON:0005068!1.41e-14!52;UBERON:0006241!1.41e-14!52;UBERON:0007135!1.41e-14!52;UBERON:0000955!3.32e-13!50;UBERON:0006238!3.32e-13!50;UBERON:0002616!9.95e-13!49;UBERON:0001017!2.94e-12!73;UBERON:0005743!2.94e-12!73;UBERON:0000073!9.90e-12!75;UBERON:0001016!9.90e-12!75;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0002020!3.35e-11!34;UBERON:0000033!3.76e-11!63;UBERON:0003080!1.21e-10!40;UBERON:0004121!2.16e-10!102;UBERON:0000924!2.16e-10!102;UBERON:0006601!2.16e-10!102;UBERON:0002780!3.66e-10!39;UBERON:0001890!3.66e-10!39;UBERON:0006240!3.66e-10!39;UBERON:0003056!3.70e-09!49;UBERON:0002791!4.42e-08!29;UBERON:0003528!4.42e-08!29;UBERON:0001893!4.42e-08!29;UBERON:0000153!3.01e-07!94;UBERON:0007811!5.00e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.34e-28,34;UBERON:0000073,5.70e-23,54;UBERON:0002021,1.71e-20,10;UBERON:0000411,1.71e-20,10;UBERON:0001950,1.71e-20,10;UBERON:0001017,1.31e-19,73;UBERON:0001049,3.37e-19,52;UBERON:0005068,3.37e-19,52;UBERON:0006241,3.37e-19,52;UBERON:0007135,3.37e-19,52;UBERON:0001016,5.71e-19,75;UBERON:0001948,9.84e-17,5;UBERON:0002315,9.84e-17,5;UBERON:0003528,1.40e-16,29;UBERON:0002791,1.40e-16,29;UBERON:0001893,1.40e-16,29;UBERON:0002346,7.13e-15,64;UBERON:0003075,7.13e-15,64;UBERON:0007284,7.13e-15,64;UBERON:0002619,1.56e-14,17;UBERON:0000956,4.58e-14,21;UBERON:0001869,4.58e-14,21;UBERON:0000203,4.58e-14,21;UBERON:0004121,4.91e-14,95;UBERON:0000924,4.91e-14,95;UBERON:0006601,4.91e-14,95;UBERON:0002240,6.66e-14,6;UBERON:0005174,6.66e-14,6;UBERON:0001137,6.66e-14,6;UBERON:0002780,9.92e-14,39;UBERON:0001890,9.92e-14,39;UBERON:0006240,9.92e-14,39;UBERON:0003080,2.57e-13,40;UBERON:0010371,1.46e-12,73;UBERON:0002616,3.27e-11,46;UBERON:0000955,6.50e-11,47;UBERON:0006238,6.50e-11,47;UBERON:0002257,8.26e-11,3;UBERON:0010314,2.30e-10,92;UBERON:0003056,2.36e-10,49;UBERON:0000025,1.39e-07,114;UBERON:0002256,1.46e-07,2;UBERON:0004111,8.06e-07,122;UBERON:0003076,8.45e-07,12;UBERON:0003057,8.45e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,2.28520787523043,1.32521124570968,0.489963196859816,0.191690942036473,0,2.20231761998777,1.40456071893706,0.921639199537461,1.05509030184155,1.28082701043374,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,3.24091444021034,1.56608848879013,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0,0.11981512450592,0,0,0.748953197024114,0.457500602818626,2.26177833803156,1.21677024134594,1.53429274398198,1.87009240103604,0.973447578406546,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0.136072998302656,0.896796041993948,0.374806898238915,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0,1.3173006917463,0,1.47202963994889,0.514523061896422,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.280543279561274,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0,0.405720242777006,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.963303539926752,0.586058432961016,0.163934945376675,0.504941854408746,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.141940085208269,0.534196811001766,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0.291480836629851,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.448549638131936,0.66183396182839,0.194451188344048,0.258319646955462,0,0.117357238645754,0.5208175393758,0.419437377702843,0.483168241652012,0.576060012515731,0.316011120628178,0,0,0.51968329191118,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,1.10992976687032,0.538283139656854,0.335769232728157,0.19318959403219,0,0,0,0,2.25900737046827,2.76195141904306,2.86447756719698,2.06223818812425,0,1.5107877947794,3.37511250115903,0,1.35942722695261,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0,0,0,0.206035057238894,0.962757628775446,0,0.760437899670719,0.188626341386076,0.187283014939765,0,0.287177344778066,0.476293691283074,0.347652977834566,0.77163688185482,0,0.588795680537589,1.02860775715625,0.177475806159338,1.1921809497366,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Jmjd4 | |||
}} |
Revision as of 20:10, 12 September 2013
Short description: | p3@Jmjd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jmjd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 9bp_to_ENSMUST00000126158_5end |
EntrezGene: | Jmjd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.42e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-15 | 23 |
neuron of the ventral spinal cord | 8.26e-11 | 3 |
neuron | 6.85e-10 | 33 |
neuronal stem cell | 6.85e-10 | 33 |
neuroblast | 6.85e-10 | 33 |
electrically signaling cell | 6.85e-10 | 33 |
electrically responsive cell | 4.66e-08 | 39 |
electrically active cell | 4.66e-08 | 39 |
neuron of the dorsal spinal cord | 1.46e-07 | 2 |
neural cell | 4.02e-07 | 43 |
ectodermal cell | 6.47e-07 | 44 |
neurectodermal cell | 6.47e-07 | 44 |
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