FFCP PHASE1:Mm9::chr11:6428444..6428465,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=0bp_to_ENSMUST00000124818_5end|description=CAGE_peak_1_at_ENSMUST00000124818_5end|id=chr11:6428444..6428465,-|ontology_enrichment_celltype=CL:0000219!1.67e-15!54;CL:0002320!9.83e-15!46;CL:0000134!9.83e-15!46;CL:0000988!1.25e-13!32;CL:0002032!1.25e-13!32;CL:0000037!1.25e-13!32;CL:0000566!1.25e-13!32;CL:0000837!1.25e-13!32;CL:0000063!1.54e-11!66;CL:0002031!2.97e-10!25;CL:0000034!4.33e-10!97;CL:0000144!2.02e-09!121;CL:0000012!2.02e-09!121;CL:0000548!2.42e-09!115;CL:0000004!2.42e-09!115;CL:0000255!2.42e-09!115;CL:0000738!9.91e-09!17;CL:0002087!9.91e-09!17;CL:0000723!1.50e-08!91;CL:0000048!1.50e-08!91;CL:0002371!3.60e-08!118;CL:0000049!7.81e-08!19;CL:0000838!1.19e-07!12;CL:0000084!3.59e-07!11;CL:0000827!3.59e-07!11;CL:0000542!4.84e-07!13;CL:0000051!4.84e-07!13|ontology_enrichment_celltype_v019_2=CL:0002320,2.65e-23,46;CL:0000134,2.65e-23,46;CL:0000219,2.21e-22,54;CL:0000034,1.56e-19,97;CL:0000988,2.82e-19,32;CL:0002032,2.82e-19,32;CL:0000037,2.82e-19,32;CL:0000837,2.82e-19,32;CL:0000723,1.19e-16,91;CL:0000048,1.19e-16,91;CL:0002031,3.43e-13,25;CL:0000738,2.98e-11,17;CL:0002087,2.98e-11,17;CL:0000049,4.77e-11,19;CL:0000838,2.54e-10,12;CL:0000084,2.10e-09,11;CL:0000827,2.10e-09,11;CL:0000542,2.63e-09,13;CL:0000051,2.63e-09,13;CL:0000763,9.44e-08,16;CL:0000680,1.60e-07,6;CL:0000187,1.60e-07,6;CL:0000056,1.60e-07,6;CL:0000791,4.32e-07,9;CL:0000789,4.32e-07,9;CL:0002420,4.32e-07,9;CL:0002419,4.32e-07,9;CL:0000790,4.32e-07,9;CL:0000557,8.29e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.83e-15!46;UBERON:0002193!1.57e-14!48;UBERON:0002390!2.45e-13!45;UBERON:0003061!2.45e-13!45;UBERON:0003081!8.29e-11!88;UBERON:0002405!4.29e-08!70;UBERON:0002371!6.03e-08!16;UBERON:0003408!4.70e-07!24;UBERON:0000072!6.89e-07!27;UBERON:0004177!7.98e-07!29;UBERON:0002370!9.90e-07!23;UBERON:0000974!9.90e-07!23;UBERON:0004807!9.90e-07!23;UBERON:0005058!9.90e-07!23;UBERON:0003351!9.90e-07!23;UBERON:0009113!9.90e-07!23;UBERON:0003295!9.90e-07!23;UBERON:0009722!9.90e-07!23;UBERON:0005562!9.90e-07!23;UBERON:0007690!9.90e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-23,46;UBERON:0002193,3.16e-15,48;UBERON:0002405,3.16e-15,48;UBERON:0002390,4.16e-14,45;UBERON:0003061,4.16e-14,45;UBERON:0002371,3.19e-11,16;UBERON:0002204,5.75e-10,32;UBERON:0003081,4.55e-08,87;UBERON:0003408,1.88e-07,24;UBERON:0000072,1.93e-07,27;UBERON:0001474,3.62e-07,22;UBERON:0004765,3.62e-07,22;UBERON:0001434,3.62e-07,22;UBERON:0002370,6.62e-07,23;UBERON:0000974,6.62e-07,23;UBERON:0004807,6.62e-07,23;UBERON:0005058,6.62e-07,23;UBERON:0003351,6.62e-07,23;UBERON:0009113,6.62e-07,23;UBERON:0003295,6.62e-07,23;UBERON:0009722,6.62e-07,23;UBERON:0005562,6.62e-07,23;UBERON:0007690,6.62e-07,23|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,2.1950964985068,32.3814060948834,29.7261948428932,17.8066686954525,17.1510141839973,0.856003649656029,0.786783621770977,0.333109761815663,0.404950534779652,2.09868563438444,1.41957974411207,2.4680598049033,4.2438965179803,0.425216450755349,4.66667470644161,5.22399578277871,1.43993180514066,0.68822784320151,0,0.430761996159075,0.646413698057667,0.190023419456374,0.504060259519861,0.443461021310609,0.635030673459631,1.84519436275371,0,1.44425809875637,0.831173226792462,1.22501613757421,0,0,0,0,0,0,3.77690453926732,4.56196190487815,3.12029478674859,0,0.218025156380447,1.5378032791413,0.972149495371417,2.37976916763116,1.43752564364972,2.34895648480831,1.45072428402269,3.36093799142464,1.80081605225163,2.57880095944881,1.54701627683233,0,0,0,2.71075625655306,2.66788438833342,2.6996991518442,4.94433181283487,1.4209602298922,1.79760066311043,0.768436610643109,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.589257170947335,0.569486723196412,0,0.757261933331841,0.604572480854284,0.289864488701678,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,1.02258193546835,1.29893002301434,1.7666978725517,0.14084341977668,2.56652954828636,0,0,2.59789249213457,1.77351905832569,0.505524445014783,0.5709193985953,4.40194402200192,0.29688427812965,0.520455980298408,1.21786191324856,0,0.452167921657868,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,10.0644704584973,7.7987355029143,5.59108999121485,0,0,0.628271760564322,0,0,0,0.324482526135515,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,5.61770549850588,5.1469581422943,3.6941254921427,0.207125772535502,0.938104239924385,0.540186184383045,0,0.393528463494808,0.154267112887378,0.232533944750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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000124818_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000124818_5end | |||
|id=chr11:6428444..6428465,- | |||
|ontology_enrichment_celltype=CL:0000219!1.67e-15!54;CL:0002320!9.83e-15!46;CL:0000134!9.83e-15!46;CL:0000988!1.25e-13!32;CL:0002032!1.25e-13!32;CL:0000037!1.25e-13!32;CL:0000566!1.25e-13!32;CL:0000837!1.25e-13!32;CL:0000063!1.54e-11!66;CL:0002031!2.97e-10!25;CL:0000034!4.33e-10!97;CL:0000144!2.02e-09!121;CL:0000012!2.02e-09!121;CL:0000548!2.42e-09!115;CL:0000004!2.42e-09!115;CL:0000255!2.42e-09!115;CL:0000738!9.91e-09!17;CL:0002087!9.91e-09!17;CL:0000723!1.50e-08!91;CL:0000048!1.50e-08!91;CL:0002371!3.60e-08!118;CL:0000049!7.81e-08!19;CL:0000838!1.19e-07!12;CL:0000084!3.59e-07!11;CL:0000827!3.59e-07!11;CL:0000542!4.84e-07!13;CL:0000051!4.84e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.65e-23,46;CL:0000134,2.65e-23,46;CL:0000219,2.21e-22,54;CL:0000034,1.56e-19,97;CL:0000988,2.82e-19,32;CL:0002032,2.82e-19,32;CL:0000037,2.82e-19,32;CL:0000837,2.82e-19,32;CL:0000723,1.19e-16,91;CL:0000048,1.19e-16,91;CL:0002031,3.43e-13,25;CL:0000738,2.98e-11,17;CL:0002087,2.98e-11,17;CL:0000049,4.77e-11,19;CL:0000838,2.54e-10,12;CL:0000084,2.10e-09,11;CL:0000827,2.10e-09,11;CL:0000542,2.63e-09,13;CL:0000051,2.63e-09,13;CL:0000763,9.44e-08,16;CL:0000680,1.60e-07,6;CL:0000187,1.60e-07,6;CL:0000056,1.60e-07,6;CL:0000791,4.32e-07,9;CL:0000789,4.32e-07,9;CL:0002420,4.32e-07,9;CL:0002419,4.32e-07,9;CL:0000790,4.32e-07,9;CL:0000557,8.29e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.83e-15!46;UBERON:0002193!1.57e-14!48;UBERON:0002390!2.45e-13!45;UBERON:0003061!2.45e-13!45;UBERON:0003081!8.29e-11!88;UBERON:0002405!4.29e-08!70;UBERON:0002371!6.03e-08!16;UBERON:0003408!4.70e-07!24;UBERON:0000072!6.89e-07!27;UBERON:0004177!7.98e-07!29;UBERON:0002370!9.90e-07!23;UBERON:0000974!9.90e-07!23;UBERON:0004807!9.90e-07!23;UBERON:0005058!9.90e-07!23;UBERON:0003351!9.90e-07!23;UBERON:0009113!9.90e-07!23;UBERON:0003295!9.90e-07!23;UBERON:0009722!9.90e-07!23;UBERON:0005562!9.90e-07!23;UBERON:0007690!9.90e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-23,46;UBERON:0002193,3.16e-15,48;UBERON:0002405,3.16e-15,48;UBERON:0002390,4.16e-14,45;UBERON:0003061,4.16e-14,45;UBERON:0002371,3.19e-11,16;UBERON:0002204,5.75e-10,32;UBERON:0003081,4.55e-08,87;UBERON:0003408,1.88e-07,24;UBERON:0000072,1.93e-07,27;UBERON:0001474,3.62e-07,22;UBERON:0004765,3.62e-07,22;UBERON:0001434,3.62e-07,22;UBERON:0002370,6.62e-07,23;UBERON:0000974,6.62e-07,23;UBERON:0004807,6.62e-07,23;UBERON:0005058,6.62e-07,23;UBERON:0003351,6.62e-07,23;UBERON:0009113,6.62e-07,23;UBERON:0003295,6.62e-07,23;UBERON:0009722,6.62e-07,23;UBERON:0005562,6.62e-07,23;UBERON:0007690,6.62e-07,23 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,2.1950964985068,32.3814060948834,29.7261948428932,17.8066686954525,17.1510141839973,0.856003649656029,0.786783621770977,0.333109761815663,0.404950534779652,2.09868563438444,1.41957974411207,2.4680598049033,4.2438965179803,0.425216450755349,4.66667470644161,5.22399578277871,1.43993180514066,0.68822784320151,0,0.430761996159075,0.646413698057667,0.190023419456374,0.504060259519861,0.443461021310609,0.635030673459631,1.84519436275371,0,1.44425809875637,0.831173226792462,1.22501613757421,0,0,0,0,0,0,3.77690453926732,4.56196190487815,3.12029478674859,0,0.218025156380447,1.5378032791413,0.972149495371417,2.37976916763116,1.43752564364972,2.34895648480831,1.45072428402269,3.36093799142464,1.80081605225163,2.57880095944881,1.54701627683233,0,0,0,2.71075625655306,2.66788438833342,2.6996991518442,4.94433181283487,1.4209602298922,1.79760066311043,0.768436610643109,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.589257170947335,0.569486723196412,0,0.757261933331841,0.604572480854284,0.289864488701678,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,1.02258193546835,1.29893002301434,1.7666978725517,0.14084341977668,2.56652954828636,0,0,2.59789249213457,1.77351905832569,0.505524445014783,0.5709193985953,4.40194402200192,0.29688427812965,0.520455980298408,1.21786191324856,0,0.452167921657868,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0,10.0644704584973,7.7987355029143,5.59108999121485,0,0,0.628271760564322,0,0,0,0.324482526135515,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,5.61770549850588,5.1469581422943,3.6941254921427,0.207125772535502,0.938104239924385,0.540186184383045,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0.949058123089023,0.329397909448022,1.25667604400135,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.147610147979602,0,0.370191491765402,0,0.166845105716094,0.589676985339609,0.449724224769707,0,0.482354319504834,0.25462585178142,0.863088412352432,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,3.01582567878545,2.71952841909355,0.983528546038072,1.65562047782839,0,0,1.63934945376675,0,0.631016438832513,1.17131623288992,0.646270193198397,0.955875191810208,1.11399337041197,0.283076530788832,1.21443210502468,1.46127928955656,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,2.65490276679926,0.242780636154981,0.604647113929502,0.943025398779491,0,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,2.64634077665954,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0,0,0,0.170870880797853,0.206386867963223,0.555583582109135,0.941842285023455,1.0935538217682,0.915112692826091,6.11922347977879,3.91864066506242,4.00779924032829,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.539457385539283,0.330613822901344,1.04702376793612,0.129614973291793,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0.316011120628178,0.608175645870493,0.924398614483445,1.03936658382236,1.9692936523423,1.58945083825012,0.961563596159751,1.47689527174577,1.31256384932592,1.143102099825,1.10908803650525,0.779663045918019,1.82802499116626,1.28564592399726,0,0,3.40912655116008,0.839423081820392,0.386379188064381,1.68914227906064,0.36630324853453,0.643105137237198,2.50786052017682,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0.51776031175182,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0,0.37456602987953,0,0.287177344778066,0.476293691283074,0.115884325944855,0.77163688185482,0,0.588795680537589,0,0.70990322463735,0,0,0.094109380415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| |||
|short_description=p1@ENSMUST00000124818 | |||
}} |
Revision as of 20:21, 12 September 2013
Short description: | p1@ENSMUST00000124818 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000124818_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000124818_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.65e-23 | 46 |
mesenchymal cell | 2.65e-23 | 46 |
motile cell | 2.21e-22 | 54 |
stem cell | 1.56e-19 | 97 |
hematopoietic cell | 2.82e-19 | 32 |
hematopoietic oligopotent progenitor cell | 2.82e-19 | 32 |
hematopoietic stem cell | 2.82e-19 | 32 |
hematopoietic multipotent progenitor cell | 2.82e-19 | 32 |
somatic stem cell | 1.19e-16 | 91 |
multi fate stem cell | 1.19e-16 | 91 |
hematopoietic lineage restricted progenitor cell | 3.43e-13 | 25 |
leukocyte | 2.98e-11 | 17 |
nongranular leukocyte | 2.98e-11 | 17 |
common myeloid progenitor | 4.77e-11 | 19 |
lymphoid lineage restricted progenitor cell | 2.54e-10 | 12 |
T cell | 2.10e-09 | 11 |
pro-T cell | 2.10e-09 | 11 |
lymphocyte | 2.63e-09 | 13 |
common lymphoid progenitor | 2.63e-09 | 13 |
myeloid cell | 9.44e-08 | 16 |
muscle precursor cell | 1.60e-07 | 6 |
muscle cell | 1.60e-07 | 6 |
myoblast | 1.60e-07 | 6 |
mature alpha-beta T cell | 4.32e-07 | 9 |
alpha-beta T cell | 4.32e-07 | 9 |
immature T cell | 4.32e-07 | 9 |
mature T cell | 4.32e-07 | 9 |
immature alpha-beta T cell | 4.32e-07 | 9 |
granulocyte monocyte progenitor cell | 8.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.65e-23 | 46 |
hemolymphoid system | 3.16e-15 | 48 |
immune system | 3.16e-15 | 48 |
hematopoietic system | 4.16e-14 | 45 |
blood island | 4.16e-14 | 45 |
bone marrow | 3.19e-11 | 16 |
musculoskeletal system | 5.75e-10 | 32 |
lateral plate mesoderm | 4.55e-08 | 87 |
gland of gut | 1.88e-07 | 24 |
segment of respiratory tract | 1.93e-07 | 27 |
bone element | 3.62e-07 | 22 |
skeletal element | 3.62e-07 | 22 |
skeletal system | 3.62e-07 | 22 |
thymus | 6.62e-07 | 23 |
neck | 6.62e-07 | 23 |
respiratory system epithelium | 6.62e-07 | 23 |
hemolymphoid system gland | 6.62e-07 | 23 |
pharyngeal epithelium | 6.62e-07 | 23 |
thymic region | 6.62e-07 | 23 |
pharyngeal gland | 6.62e-07 | 23 |
entire pharyngeal arch endoderm | 6.62e-07 | 23 |
thymus primordium | 6.62e-07 | 23 |
early pharyngeal endoderm | 6.62e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.