FFCP PHASE1:Mm9::chr11:78313370..78313383,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1996|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:78313370..78313383,+|id=chr11:78313370..78313383,+|ontology_enrichment_celltype=CL:0000181!8.47e-12!5;CL:0000417!8.47e-12!5;CL:0000668!8.47e-12!5;CL:0000412!8.47e-12!5;CL:0000182!8.47e-12!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.07e-17,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.36e-37!22;UBERON:0007499!8.36e-37!22;UBERON:0006925!8.36e-37!22;UBERON:0009497!8.36e-37!22;UBERON:0000015!8.36e-37!22;UBERON:0002423!8.36e-37!22;UBERON:0006235!8.36e-37!22;UBERON:0008835!8.36e-37!22;UBERON:0003894!8.36e-37!22;UBERON:0004161!8.36e-37!22;UBERON:0008836!8.36e-37!22;UBERON:0009854!5.70e-35!23;UBERON:0009856!5.70e-35!23;UBERON:0002365!9.61e-32!25;UBERON:0002330!9.61e-32!25;UBERON:0003914!2.03e-14!47;UBERON:0005256!2.03e-14!47;UBERON:0002368!5.35e-14!60;UBERON:0005172!1.27e-13!49;UBERON:0005173!1.27e-13!49;UBERON:0002417!1.27e-13!49;UBERON:0000916!1.27e-13!49;UBERON:0005057!6.91e-13!51;UBERON:0002530!1.78e-12!65;UBERON:0000949!5.89e-12!72;UBERON:0003929!1.40e-11!55;UBERON:0000490!7.99e-09!66;UBERON:0009569!7.99e-09!66;UBERON:0005911!3.14e-08!69;UBERON:0002405!4.82e-08!70;UBERON:0000466!1.67e-07!79;UBERON:0005177!1.86e-07!85;UBERON:0000025!8.82e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.35e-38,22;UBERON:0007499,2.35e-38,22;UBERON:0006925,2.35e-38,22;UBERON:0009497,2.35e-38,22;UBERON:0000015,2.35e-38,22;UBERON:0002423,2.35e-38,22;UBERON:0006235,2.35e-38,22;UBERON:0008835,2.35e-38,22;UBERON:0003894,2.35e-38,22;UBERON:0004161,2.35e-38,22;UBERON:0008836,2.35e-38,22;UBERON:0009854,1.28e-36,23;UBERON:0009856,1.28e-36,23;UBERON:0002365,1.47e-33,25;UBERON:0002330,1.47e-33,25;UBERON:0005256,6.96e-18,45;UBERON:0003914,4.78e-17,47;UBERON:0005172,2.80e-16,49;UBERON:0005173,2.80e-16,49;UBERON:0002417,2.80e-16,49;UBERON:0000916,2.80e-16,49;UBERON:0003929,2.63e-14,55;UBERON:0002368,5.82e-13,60;UBERON:0003104,1.02e-12,61;UBERON:0009142,1.02e-12,61;UBERON:0000949,2.63e-12,72;UBERON:0002530,8.03e-12,65;UBERON:0000490,1.29e-11,66;UBERON:0009569,1.29e-11,66;UBERON:0005177,4.85e-11,79;UBERON:0005911,4.99e-11,69;UBERON:0002100,1.91e-09,90;UBERON:0001041,2.98e-09,80;UBERON:0001048,8.11e-07,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,10.879541339324,4.31762553310254,4.54843492213368,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,6.73413938836717,0,0,0,0,0,0,0,18.3679393224701,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0.202860121388503,0,1.01850340712568,1.43848068725405,3.24270453550071,0.549122826376163,8.62609239164127,1.48856379067401,1.87222603868736,1.26289438973556,0.179397413521912,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:78313370..78313383,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1996 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:78313370..78313383,+ | |||
|id=chr11:78313370..78313383,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.47e-12!5;CL:0000417!8.47e-12!5;CL:0000668!8.47e-12!5;CL:0000412!8.47e-12!5;CL:0000182!8.47e-12!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.07e-17,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.36e-37!22;UBERON:0007499!8.36e-37!22;UBERON:0006925!8.36e-37!22;UBERON:0009497!8.36e-37!22;UBERON:0000015!8.36e-37!22;UBERON:0002423!8.36e-37!22;UBERON:0006235!8.36e-37!22;UBERON:0008835!8.36e-37!22;UBERON:0003894!8.36e-37!22;UBERON:0004161!8.36e-37!22;UBERON:0008836!8.36e-37!22;UBERON:0009854!5.70e-35!23;UBERON:0009856!5.70e-35!23;UBERON:0002365!9.61e-32!25;UBERON:0002330!9.61e-32!25;UBERON:0003914!2.03e-14!47;UBERON:0005256!2.03e-14!47;UBERON:0002368!5.35e-14!60;UBERON:0005172!1.27e-13!49;UBERON:0005173!1.27e-13!49;UBERON:0002417!1.27e-13!49;UBERON:0000916!1.27e-13!49;UBERON:0005057!6.91e-13!51;UBERON:0002530!1.78e-12!65;UBERON:0000949!5.89e-12!72;UBERON:0003929!1.40e-11!55;UBERON:0000490!7.99e-09!66;UBERON:0009569!7.99e-09!66;UBERON:0005911!3.14e-08!69;UBERON:0002405!4.82e-08!70;UBERON:0000466!1.67e-07!79;UBERON:0005177!1.86e-07!85;UBERON:0000025!8.82e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.35e-38,22;UBERON:0007499,2.35e-38,22;UBERON:0006925,2.35e-38,22;UBERON:0009497,2.35e-38,22;UBERON:0000015,2.35e-38,22;UBERON:0002423,2.35e-38,22;UBERON:0006235,2.35e-38,22;UBERON:0008835,2.35e-38,22;UBERON:0003894,2.35e-38,22;UBERON:0004161,2.35e-38,22;UBERON:0008836,2.35e-38,22;UBERON:0009854,1.28e-36,23;UBERON:0009856,1.28e-36,23;UBERON:0002365,1.47e-33,25;UBERON:0002330,1.47e-33,25;UBERON:0005256,6.96e-18,45;UBERON:0003914,4.78e-17,47;UBERON:0005172,2.80e-16,49;UBERON:0005173,2.80e-16,49;UBERON:0002417,2.80e-16,49;UBERON:0000916,2.80e-16,49;UBERON:0003929,2.63e-14,55;UBERON:0002368,5.82e-13,60;UBERON:0003104,1.02e-12,61;UBERON:0009142,1.02e-12,61;UBERON:0000949,2.63e-12,72;UBERON:0002530,8.03e-12,65;UBERON:0000490,1.29e-11,66;UBERON:0009569,1.29e-11,66;UBERON:0005177,4.85e-11,79;UBERON:0005911,4.99e-11,69;UBERON:0002100,1.91e-09,90;UBERON:0001041,2.98e-09,80;UBERON:0001048,8.11e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,10.879541339324,4.31762553310254,4.54843492213368,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,6.73413938836717,0,0,0,0,0,0,0,18.3679393224701,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0.202860121388503,0,1.01850340712568,1.43848068725405,3.24270453550071,0.549122826376163,8.62609239164127,1.48856379067401,1.87222603868736,1.26289438973556,0.179397413521912,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:78313370..78313383,+ | |||
}} |
Revision as of 21:04, 12 September 2013
Short description: | p@chr11:78313370..78313383, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78313370..78313383, + |
Coexpression cluster: | MCL_coexpression_mm9:1996 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.07e-17 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.35e-38 | 22 |
epithelial sac | 2.35e-38 | 22 |
digestive gland | 2.35e-38 | 22 |
epithelium of foregut-midgut junction | 2.35e-38 | 22 |
anatomical boundary | 2.35e-38 | 22 |
hepatobiliary system | 2.35e-38 | 22 |
foregut-midgut junction | 2.35e-38 | 22 |
hepatic diverticulum | 2.35e-38 | 22 |
liver primordium | 2.35e-38 | 22 |
septum transversum | 2.35e-38 | 22 |
liver bud | 2.35e-38 | 22 |
digestive tract diverticulum | 1.28e-36 | 23 |
sac | 1.28e-36 | 23 |
exocrine gland | 1.47e-33 | 25 |
exocrine system | 1.47e-33 | 25 |
trunk mesenchyme | 6.96e-18 | 45 |
epithelial tube | 4.78e-17 | 47 |
abdomen element | 2.80e-16 | 49 |
abdominal segment element | 2.80e-16 | 49 |
abdominal segment of trunk | 2.80e-16 | 49 |
abdomen | 2.80e-16 | 49 |
gut epithelium | 2.63e-14 | 55 |
endocrine gland | 5.82e-13 | 60 |
mesenchyme | 1.02e-12 | 61 |
entire embryonic mesenchyme | 1.02e-12 | 61 |
endocrine system | 2.63e-12 | 72 |
gland | 8.03e-12 | 65 |
unilaminar epithelium | 1.29e-11 | 66 |
subdivision of trunk | 1.29e-11 | 66 |
trunk region element | 4.85e-11 | 79 |
endo-epithelium | 4.99e-11 | 69 |
trunk | 1.91e-09 | 90 |
foregut | 2.98e-09 | 80 |
primordium | 8.11e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.