FFCP PHASE1:Mm9::chr11:97436553..97436570,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56013|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000142123_5end|description=CAGE_peak_2_at_Srcin1_5end|id=chr11:97436553..97436570,-|ontology_enrichment_celltype=CL:0000540!8.76e-16!33;CL:0000047!8.76e-16!33;CL:0000031!8.76e-16!33;CL:0000404!8.76e-16!33;CL:0000117!1.22e-13!23;CL:0000337!1.22e-13!23;CL:0000221!9.30e-12!44;CL:0000133!9.30e-12!44;CL:0002319!2.33e-11!43;CL:0000393!3.25e-11!39;CL:0000211!3.25e-11!39;CL:0000055!7.66e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.69e-19,33;CL:0000047,2.69e-19,33;CL:0000031,2.69e-19,33;CL:0000404,2.69e-19,33;CL:0000117,6.44e-18,23;CL:0000337,6.44e-18,23;CL:0000393,1.53e-14,39;CL:0000211,1.53e-14,39;CL:0000221,1.94e-13,44;CL:0000133,1.94e-13,44;CL:0002319,6.42e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.13e-31!102;UBERON:0000924!1.13e-31!102;UBERON:0006601!1.13e-31!102;UBERON:0001017!1.21e-30!73;UBERON:0005743!1.21e-30!73;UBERON:0000073!3.60e-30!75;UBERON:0001016!3.60e-30!75;UBERON:0002346!4.55e-28!71;UBERON:0003075!4.55e-28!71;UBERON:0007284!4.55e-28!71;UBERON:0000033!8.25e-27!63;UBERON:0001049!3.43e-25!52;UBERON:0005068!3.43e-25!52;UBERON:0006241!3.43e-25!52;UBERON:0007135!3.43e-25!52;UBERON:0000955!8.67e-24!50;UBERON:0006238!8.67e-24!50;UBERON:0002616!3.70e-23!49;UBERON:0003056!9.95e-23!49;UBERON:0003080!7.45e-20!40;UBERON:0002780!4.21e-19!39;UBERON:0001890!4.21e-19!39;UBERON:0006240!4.21e-19!39;UBERON:0002020!7.00e-19!34;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!1.73e-12!86;UBERON:0000153!2.85e-12!94;UBERON:0000956!2.86e-11!21;UBERON:0001869!2.86e-11!21;UBERON:0000203!2.86e-11!21;UBERON:0002619!4.69e-09!17;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10;UBERON:0000468!8.77e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-39,73;UBERON:0001016,1.01e-37,75;UBERON:0002346,3.32e-36,64;UBERON:0003075,3.32e-36,64;UBERON:0007284,3.32e-36,64;UBERON:0004121,6.55e-36,95;UBERON:0000924,6.55e-36,95;UBERON:0006601,6.55e-36,95;UBERON:0000073,4.23e-35,54;UBERON:0001049,1.70e-33,52;UBERON:0005068,1.70e-33,52;UBERON:0006241,1.70e-33,52;UBERON:0007135,1.70e-33,52;UBERON:0010371,8.00e-32,73;UBERON:0003056,3.37e-30,49;UBERON:0000955,4.07e-29,47;UBERON:0006238,4.07e-29,47;UBERON:0002616,2.81e-28,46;UBERON:0003080,2.70e-26,40;UBERON:0002780,2.83e-25,39;UBERON:0001890,2.83e-25,39;UBERON:0006240,2.83e-25,39;UBERON:0002020,5.69e-25,34;UBERON:0010314,3.27e-22,92;UBERON:0003528,6.31e-21,29;UBERON:0002791,6.31e-21,29;UBERON:0001893,6.31e-21,29;UBERON:0000956,1.18e-14,21;UBERON:0001869,1.18e-14,21;UBERON:0000203,1.18e-14,21;UBERON:0002619,1.17e-11,17;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0003076,1.69e-07,12;UBERON:0003057,1.69e-07,12;UBERON:0002420,1.85e-07,8;UBERON:0007245,1.85e-07,8;UBERON:0010009,1.85e-07,8;UBERON:0010011,1.85e-07,8;UBERON:0000454,1.85e-07,8;UBERON:0000025,8.96e-07,114|phase1_expression=5.92550734287738,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,11.7343547298567,11.1088105647127,6.97214543856797,0,0,0,0,0,1.19840044207362,0.384218305321555,8.70992743391212,10.5304631898719,8.62332341540666,11.9973413449598,11.7060326704355,10.656699531701,10.7346927540425,4.5960939330501,5.50579404996943,11.3641730895817,12.2885226604995,17.4089899803856,17.6571152152651,11.9810075228055,6.14202597803038,3.37657566019008,10.3902808488231,14.142172102736,9.39653093274079,9.50637173709033,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,3.94361575374705,0,0,0,0,0,0,0.79928715803342,0,0.890652834388949,0.346970653532272,0.608930956624282,0.461230994512117,1.20578112442098,1.52865319276416,0.125666591329675,0,0,0,0,0,0.484875253135222,0,28.1069565131085,25.9713916448684,0,0,0,0,18.2744580073884,14.1825186873774,11.1832373380449,18.9468509009581,18.6672283851141,15.1685272528479,15.5751612545047,0.305518091550949,0,0.252722758433675,1.89397670297827,2.34216797332867,1.37941262660084,1.26043490863744,2.56198190320716,4.42237244483631,3.45907044769094,5.80950692270319,3.62184719034622,0.646703978798527,0.945530400839096,0.879755620819744,0,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,12.8276868624118,10.9078889122042,0,0,0,0,0.515469845288373,0.80673409849337,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.799739588268102,2.25415471346161,0.610953983535943,0.969762435838129,0.420814919341911,0.632365371242573,0.147610147979602,1.41298855057237,0.246794327843601,0,0,0,0,0.202860121388503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| ||
|EntrezGene=56013 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000142123_5end | |||
|description=CAGE_peak_2_at_Srcin1_5end | |||
|id=chr11:97436553..97436570,- | |||
|ontology_enrichment_celltype=CL:0000540!8.76e-16!33;CL:0000047!8.76e-16!33;CL:0000031!8.76e-16!33;CL:0000404!8.76e-16!33;CL:0000117!1.22e-13!23;CL:0000337!1.22e-13!23;CL:0000221!9.30e-12!44;CL:0000133!9.30e-12!44;CL:0002319!2.33e-11!43;CL:0000393!3.25e-11!39;CL:0000211!3.25e-11!39;CL:0000055!7.66e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.69e-19,33;CL:0000047,2.69e-19,33;CL:0000031,2.69e-19,33;CL:0000404,2.69e-19,33;CL:0000117,6.44e-18,23;CL:0000337,6.44e-18,23;CL:0000393,1.53e-14,39;CL:0000211,1.53e-14,39;CL:0000221,1.94e-13,44;CL:0000133,1.94e-13,44;CL:0002319,6.42e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.13e-31!102;UBERON:0000924!1.13e-31!102;UBERON:0006601!1.13e-31!102;UBERON:0001017!1.21e-30!73;UBERON:0005743!1.21e-30!73;UBERON:0000073!3.60e-30!75;UBERON:0001016!3.60e-30!75;UBERON:0002346!4.55e-28!71;UBERON:0003075!4.55e-28!71;UBERON:0007284!4.55e-28!71;UBERON:0000033!8.25e-27!63;UBERON:0001049!3.43e-25!52;UBERON:0005068!3.43e-25!52;UBERON:0006241!3.43e-25!52;UBERON:0007135!3.43e-25!52;UBERON:0000955!8.67e-24!50;UBERON:0006238!8.67e-24!50;UBERON:0002616!3.70e-23!49;UBERON:0003056!9.95e-23!49;UBERON:0003080!7.45e-20!40;UBERON:0002780!4.21e-19!39;UBERON:0001890!4.21e-19!39;UBERON:0006240!4.21e-19!39;UBERON:0002020!7.00e-19!34;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!1.73e-12!86;UBERON:0000153!2.85e-12!94;UBERON:0000956!2.86e-11!21;UBERON:0001869!2.86e-11!21;UBERON:0000203!2.86e-11!21;UBERON:0002619!4.69e-09!17;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10;UBERON:0000468!8.77e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-39,73;UBERON:0001016,1.01e-37,75;UBERON:0002346,3.32e-36,64;UBERON:0003075,3.32e-36,64;UBERON:0007284,3.32e-36,64;UBERON:0004121,6.55e-36,95;UBERON:0000924,6.55e-36,95;UBERON:0006601,6.55e-36,95;UBERON:0000073,4.23e-35,54;UBERON:0001049,1.70e-33,52;UBERON:0005068,1.70e-33,52;UBERON:0006241,1.70e-33,52;UBERON:0007135,1.70e-33,52;UBERON:0010371,8.00e-32,73;UBERON:0003056,3.37e-30,49;UBERON:0000955,4.07e-29,47;UBERON:0006238,4.07e-29,47;UBERON:0002616,2.81e-28,46;UBERON:0003080,2.70e-26,40;UBERON:0002780,2.83e-25,39;UBERON:0001890,2.83e-25,39;UBERON:0006240,2.83e-25,39;UBERON:0002020,5.69e-25,34;UBERON:0010314,3.27e-22,92;UBERON:0003528,6.31e-21,29;UBERON:0002791,6.31e-21,29;UBERON:0001893,6.31e-21,29;UBERON:0000956,1.18e-14,21;UBERON:0001869,1.18e-14,21;UBERON:0000203,1.18e-14,21;UBERON:0002619,1.17e-11,17;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0003076,1.69e-07,12;UBERON:0003057,1.69e-07,12;UBERON:0002420,1.85e-07,8;UBERON:0007245,1.85e-07,8;UBERON:0010009,1.85e-07,8;UBERON:0010011,1.85e-07,8;UBERON:0000454,1.85e-07,8;UBERON:0000025,8.96e-07,114 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,11.7343547298567,11.1088105647127,6.97214543856797,0,0,0,0,0,1.19840044207362,0.384218305321555,8.70992743391212,10.5304631898719,8.62332341540666,11.9973413449598,11.7060326704355,10.656699531701,10.7346927540425,4.5960939330501,5.50579404996943,11.3641730895817,12.2885226604995,17.4089899803856,17.6571152152651,11.9810075228055,6.14202597803038,3.37657566019008,10.3902808488231,14.142172102736,9.39653093274079,9.50637173709033,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,3.94361575374705,0,0,0,0,0,0,0.79928715803342,0,0.890652834388949,0.346970653532272,0.608930956624282,0.461230994512117,1.20578112442098,1.52865319276416,0.125666591329675,0,0,0,0,0,0.484875253135222,0,28.1069565131085,25.9713916448684,0,0,0,0,18.2744580073884,14.1825186873774,11.1832373380449,18.9468509009581,18.6672283851141,15.1685272528479,15.5751612545047,0.305518091550949,0,0.252722758433675,1.89397670297827,2.34216797332867,1.37941262660084,1.26043490863744,2.56198190320716,4.42237244483631,3.45907044769094,5.80950692270319,3.62184719034622,0.646703978798527,0.945530400839096,0.879755620819744,0,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,12.8276868624118,10.9078889122042,0,0,0,0,0.515469845288373,0.80673409849337,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.799739588268102,2.25415471346161,0.610953983535943,0.969762435838129,0.420814919341911,0.632365371242573,0.147610147979602,1.41298855057237,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0.757965647081939,0.162964976442026,1.18821560042632,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,0.788175720530955,0.664394068946325,0.637819074629948,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,13.8073507389501,12.8932855251423,0,0,0.315508219416257,0.780877488593277,1.93881057959519,2.86762557543062,4.67877215573028,4.24614796183249,1.21443210502468,3.21481443702443,2.76701444562566,11.2462460747632,0,0.534196811001766,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,3.06103859853227,4.01011919726539,2.14337035031592,1.41872186913819,1.60531935841864,2.63278432963394,1.8267896946876,0,0.847328283455281,0,0.65954501176592,0.484393280087717,0.542816324353403,0.238744688006273,0.656563598980245,0,12.6089205367147,0,0,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.324016022465404,0.627264888043406,0,0.674321731924103,0.41326727862668,0,0,0,0.56369293868419,0,0,0,0.387479470433193,0,0.352071715937262,0.651021924219751,0.314578033277133,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0,13.5540442228096,17.0320337507655,16.6139698897425,17.3571714167124,13.7016503954128,17.3740596399631,18.9006300064906,18.9134905354173,11.7817026335893,19.6748918465692,2.28332164685189,4.78829848081237,5.12200817262403,1.94485373654635,2.93458427679175,4.96377472815038,3.33370091702423,3.7086310303001,1.92551525755089,3.03236654116557,2.28131369901216,2.07488975524684,3.65201879132541,3.58540853467268,2.87177344778066,0.952587382566147,2.20180219295225,3.08654752741928,2.06042950401653,1.17759136107518,3.08582327146874,2.66213709239006,4.05341522910446,3.0522747492789,1.59985946706062,2.79228206042532,1.46342378298218,1.57841826862706,2.58027816307137,0.561142271657738,2.49133538060766,2.06859412988683,2.45538625901814,3.09873682371932,1.92906610981141,9.49280196164194,4.21076895201735,2.14871054048298,1.3390183244819,0.220591419119515,0.927471342481686 | |||
|short_description=p2@Srcin1 | |||
}} |
Revision as of 21:44, 12 September 2013
Short description: | p2@Srcin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srcin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -13bp_to_ENSMUST00000142123_5end |
EntrezGene: | Srcin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.69e-19 | 33 |
neuronal stem cell | 2.69e-19 | 33 |
neuroblast | 2.69e-19 | 33 |
electrically signaling cell | 2.69e-19 | 33 |
CNS neuron (sensu Vertebrata) | 6.44e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.44e-18 | 23 |
electrically responsive cell | 1.53e-14 | 39 |
electrically active cell | 1.53e-14 | 39 |
ectodermal cell | 1.94e-13 | 44 |
neurectodermal cell | 1.94e-13 | 44 |
neural cell | 6.42e-13 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.