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FFCP PHASE1:Mm9::chr12:114067562..114067637,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71963|HGNC=|MCL_coexpression_id=49|UniProt=Q9CWM2|association_with_transcript=0bp_to_ENSMUST00000062092,NM_028023,uc007pfi.1,uc007pfj.1_5end|description=CAGE_peak_1_at_Cdca4_5end|id=chr12:114067562..114067637,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.62e-10!29;UBERON:0002390!3.07e-08!45;UBERON:0003061!3.07e-08!45;UBERON:0002370!3.55e-07!23;UBERON:0000974!3.55e-07!23;UBERON:0004807!3.55e-07!23;UBERON:0005058!3.55e-07!23;UBERON:0003351!3.55e-07!23;UBERON:0009113!3.55e-07!23;UBERON:0003295!3.55e-07!23;UBERON:0009722!3.55e-07!23;UBERON:0005562!3.55e-07!23;UBERON:0007690!3.55e-07!23;UBERON:0002193!3.71e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.62e-10,29;UBERON:0005057,3.62e-10,29;UBERON:0000153,2.87e-08,43;UBERON:0002390,3.07e-08,45;UBERON:0003061,3.07e-08,45;UBERON:0000077,1.40e-07,35;UBERON:0002370,3.55e-07,23;UBERON:0000974,3.55e-07,23;UBERON:0004807,3.55e-07,23;UBERON:0005058,3.55e-07,23;UBERON:0003351,3.55e-07,23;UBERON:0009113,3.55e-07,23;UBERON:0003295,3.55e-07,23;UBERON:0009722,3.55e-07,23;UBERON:0005562,3.55e-07,23;UBERON:0007690,3.55e-07,23;UBERON:0002193,3.71e-07,48;UBERON:0002405,3.71e-07,48|phase1_expression=17.7765220286321,4.88565570695105,4.09499315450582,5.44435580352294,6.51164448930251,13.4303417529512,19.1562365288331,17.5607719880544,41.814250479045,38.1525177904849,37.4967350413856,36.3761045018734,20.3728868618135,25.7890187136042,58.294208317741,68.2341651103714,89.5439204004028,16.5617636813075,15.6310454310542,21.6438722416995,10.6304112688837,36.4397790907249,33.4335730097837,11.1994695955385,12.3881011776272,3.44539178469012,8.61523992318149,9.48073423817912,10.0712412311878,12.3494763582366,13.7472916606289,47.6273005094723,50.4353125819348,15.8481681015439,26.285497397366,33.9118676531324,25.5211695327961,34.3195937204264,35.160090503571,35.5996145902183,24.1174910092716,28.6879103682547,26.7030694167134,10.5753327099485,10.7459547092685,9.72797786456912,26.6013057078333,17.8780628231966,13.4008571468028,8.55491555926847,13.5786828976602,14.3752564364972,11.9125650300993,9.42970784614748,10.4189077734164,15.1783067261209,14.0401385569991,13.4074743992135,23.6710259205729,27.5075309221457,29.7900759647904,22.3637391165627,12.450127145556,13.0485459005803,17.7995945262055,14.209602298922,12.2836045312546,11.5265491596466,44.27546445572,39.8267518078487,38.2791429659515,7.7125765789027,9.27647871996777,39.0745649495703,47.7310445670817,45.041720543891,2.20231761998777,4.59674417106676,5.9906547969935,24.3989632300859,20.0357939489277,21.8783615633839,3.90856198601933,3.93933827022176,5.34793867218835,9.72274332063103,9.5389026135399,16.2167517868012,12.0404647399763,10.6555899750568,14.2033599463822,8.60423876981386,22.4390540123558,3.77792234146472,3.89865850468601,4.03224198387602,10.9546647702766,20.622069031945,18.9643783360094,12.3668851078619,15.2110893358815,10.2661181931454,5.09610479413291,7.11066703153331,19.0512116089868,20.7755089689581,21.7375511356357,9.1347103775248,16.0541487861246,8.31275978763019,30.3599321840738,18.8768596553528,15.4512383161559,12.0578112442098,10.8181610564848,12.1896593589785,12.6069433544531,7.08536848907567,38.9228642857945,19.7355556935839,34.4512768798214,31.5168914537894,11.1835056730873,6.44117753425404,7.74952815209784,16.0937944781413,24.6819156482196,30.5950392806638,26.3035370041244,4.34392854273986,6.8625090422794,23.7486725493314,6.77914848749878,5.11430914660661,5.61027720310812,5.02947915510049,22.3028206832193,24.010545327748,5.81262344397452,8.41767423545896,45.5421550369463,44.6010082600937,38.5332957783447,27.1268672104287,29.1876581359197,29.3380419452306,26.0490794276046,7.76110112217047,90.3229890388609,53.327914607325,49.7941681383975,49.0998440637768,31.9754336609438,24.0293994900295,23.4591635505056,34.8309966932363,28.0885274925294,28.8229655968481,33.2471294292843,21.7482061162277,22.5145017581852,22.6878197440879,23.674473558521,18.8893662477508,19.591923336697,19.5328513590343,17.7060444923749,11.2094728672483,17.114224391002,11.984224877774,9.40398190731926,7.45619935869195,8.78200461164202,8.85762363818454,5.46753866266731,15.6415010816512,4.95628174475697,16.6603856998033,44.5772443618639,41.8026009348789,32.8612026371338,24.2020229548011,21.1259141652627,19.5932394895936,15.1849299694244,14.987604879885,14.3261069016154,15.5186048192098,13.4525220112193,17.9763881730844,17.2910439899755,10.3553462092271,64.8664221259539,38.2732517242592,42.8289395557706,29.3257912097252,27.5412531778029,21.1810176068762,16.947391949301,7.82333784291891,10.047918581848,6.54004968785543,3.85388415213294,51.2214474548409,52.8743696854516,59.8133218943711,53.5550720465648,47.0295461517213,41.5040138403714,36.537409456253,20.9154442539796,22.5140358814227,12.9391385874619,16.3742016974142,10.2972432127805,7.07220858251913,8.07288360848605,4.3419916922703,14.2259956428286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|EntrezGene=71963
|HGNC=
|MCL_coexpression_id=49
|UniProt=Q9CWM2
|association_with_transcript=0bp_to_ENSMUST00000062092,NM_028023,uc007pfi.1,uc007pfj.1_5end
|description=CAGE_peak_1_at_Cdca4_5end
|id=chr12:114067562..114067637,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.62e-10!29;UBERON:0002390!3.07e-08!45;UBERON:0003061!3.07e-08!45;UBERON:0002370!3.55e-07!23;UBERON:0000974!3.55e-07!23;UBERON:0004807!3.55e-07!23;UBERON:0005058!3.55e-07!23;UBERON:0003351!3.55e-07!23;UBERON:0009113!3.55e-07!23;UBERON:0003295!3.55e-07!23;UBERON:0009722!3.55e-07!23;UBERON:0005562!3.55e-07!23;UBERON:0007690!3.55e-07!23;UBERON:0002193!3.71e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.62e-10,29;UBERON:0005057,3.62e-10,29;UBERON:0000153,2.87e-08,43;UBERON:0002390,3.07e-08,45;UBERON:0003061,3.07e-08,45;UBERON:0000077,1.40e-07,35;UBERON:0002370,3.55e-07,23;UBERON:0000974,3.55e-07,23;UBERON:0004807,3.55e-07,23;UBERON:0005058,3.55e-07,23;UBERON:0003351,3.55e-07,23;UBERON:0009113,3.55e-07,23;UBERON:0003295,3.55e-07,23;UBERON:0009722,3.55e-07,23;UBERON:0005562,3.55e-07,23;UBERON:0007690,3.55e-07,23;UBERON:0002193,3.71e-07,48;UBERON:0002405,3.71e-07,48
|phase1_expression=17.7765220286321,4.88565570695105,4.09499315450582,5.44435580352294,6.51164448930251,13.4303417529512,19.1562365288331,17.5607719880544,41.814250479045,38.1525177904849,37.4967350413856,36.3761045018734,20.3728868618135,25.7890187136042,58.294208317741,68.2341651103714,89.5439204004028,16.5617636813075,15.6310454310542,21.6438722416995,10.6304112688837,36.4397790907249,33.4335730097837,11.1994695955385,12.3881011776272,3.44539178469012,8.61523992318149,9.48073423817912,10.0712412311878,12.3494763582366,13.7472916606289,47.6273005094723,50.4353125819348,15.8481681015439,26.285497397366,33.9118676531324,25.5211695327961,34.3195937204264,35.160090503571,35.5996145902183,24.1174910092716,28.6879103682547,26.7030694167134,10.5753327099485,10.7459547092685,9.72797786456912,26.6013057078333,17.8780628231966,13.4008571468028,8.55491555926847,13.5786828976602,14.3752564364972,11.9125650300993,9.42970784614748,10.4189077734164,15.1783067261209,14.0401385569991,13.4074743992135,23.6710259205729,27.5075309221457,29.7900759647904,22.3637391165627,12.450127145556,13.0485459005803,17.7995945262055,14.209602298922,12.2836045312546,11.5265491596466,44.27546445572,39.8267518078487,38.2791429659515,7.7125765789027,9.27647871996777,39.0745649495703,47.7310445670817,45.041720543891,2.20231761998777,4.59674417106676,5.9906547969935,24.3989632300859,20.0357939489277,21.8783615633839,3.90856198601933,3.93933827022176,5.34793867218835,9.72274332063103,9.5389026135399,16.2167517868012,12.0404647399763,10.6555899750568,14.2033599463822,8.60423876981386,22.4390540123558,3.77792234146472,3.89865850468601,4.03224198387602,10.9546647702766,20.622069031945,18.9643783360094,12.3668851078619,15.2110893358815,10.2661181931454,5.09610479413291,7.11066703153331,19.0512116089868,20.7755089689581,21.7375511356357,9.1347103775248,16.0541487861246,8.31275978763019,30.3599321840738,18.8768596553528,15.4512383161559,12.0578112442098,10.8181610564848,12.1896593589785,12.6069433544531,7.08536848907567,38.9228642857945,19.7355556935839,34.4512768798214,31.5168914537894,11.1835056730873,6.44117753425404,7.74952815209784,16.0937944781413,24.6819156482196,30.5950392806638,26.3035370041244,4.34392854273986,6.8625090422794,23.7486725493314,6.77914848749878,5.11430914660661,5.61027720310812,5.02947915510049,22.3028206832193,24.010545327748,5.81262344397452,8.41767423545896,45.5421550369463,44.6010082600937,38.5332957783447,27.1268672104287,29.1876581359197,29.3380419452306,26.0490794276046,7.76110112217047,90.3229890388609,53.327914607325,49.7941681383975,49.0998440637768,31.9754336609438,24.0293994900295,23.4591635505056,34.8309966932363,28.0885274925294,28.8229655968481,33.2471294292843,21.7482061162277,22.5145017581852,22.6878197440879,23.674473558521,18.8893662477508,19.591923336697,19.5328513590343,17.7060444923749,11.2094728672483,17.114224391002,11.984224877774,9.40398190731926,7.45619935869195,8.78200461164202,8.85762363818454,5.46753866266731,15.6415010816512,4.95628174475697,16.6603856998033,44.5772443618639,41.8026009348789,32.8612026371338,24.2020229548011,21.1259141652627,19.5932394895936,15.1849299694244,14.987604879885,14.3261069016154,15.5186048192098,13.4525220112193,17.9763881730844,17.2910439899755,10.3553462092271,64.8664221259539,38.2732517242592,42.8289395557706,29.3257912097252,27.5412531778029,21.1810176068762,16.947391949301,7.82333784291891,10.047918581848,6.54004968785543,3.85388415213294,51.2214474548409,52.8743696854516,59.8133218943711,53.5550720465648,47.0295461517213,41.5040138403714,36.537409456253,20.9154442539796,22.5140358814227,12.9391385874619,16.3742016974142,10.2972432127805,7.07220858251913,8.07288360848605,4.3419916922703,14.2259956428286,53.0575952957357,46.4450182859774,38.0228992136421,32.6219445121018,24.7909261013887,23.3282768068293,17.1717610114863,23.0147310395039,19.0459633097946,18.656207932926,11.6342953448174,12.9513736399422,13.8863096238251,13.5712155545345,7.61467957346193,10.8188140064188,8.55403913544671,4.33486592967038,4.33683240391152,24.262371915748,6.5642441073137,29.0267561862956,32.0159770323244,23.6965737506079,22.4630670075399,21.8342700600746,17.2676683781188,22.2645885921192,14.9050487534769,23.7172666767914,4.81981974632711,13.6262481799938,30.6272838307679,23.1299482282078,13.5275500837479,3.98235415019888,36.4170954232472,30.5346792534399,18.2946927363221,20.0805287158925,14.7568871013085,14.9888410037568,14.5413491791002,16.7553767840819,12.6414703174326,10.5418608574999,6.18813259489121,8.85142974959849,35.8321577122307,43.5938764347883,31.0788700795809,18.6207245324387,15.3397183137781,15.7967059778036,13.700922710157,14.3149741918863,15.4637411730589,11.2469483008031,16.158852788265,20.8289110437718,23.1601631724118,23.2776070806116,22.8155850645635,14.5740418314925,4.26478194624172,47.1603631002073,38.3879574411594,37.4092945286818,68.9428552637169,62.3325678407875,59.4823250336959,24.8168507791029,20.0130576822831,22.2501957825122,7.63736494412091,60.5783427707874,39.8506155568623,29.2694473627081,22.9997125615916,24.4566071395719,25.4893614667311,16.2000773221658,15.9671124610258,10.628427809927,8.69875038321696,14.0923234671048,28.5576602943999,35.0771999769047,31.6955437000798,29.4484397529227,27.0329800785245,21.00694571759,27.0825120475416,21.391306262845,17.8772249411244,16.7057403629562,55.9339683511876,51.4922046837017,46.9389074243261,44.6927631043615,57.4675693092615,63.5780335300048,51.8042387431066,57.8942946524343,50.6851578739701,56.3168301180449,59.0841444901885,50.385724342452,47.4324379286824,40.0887774482782,11.5632495643758,27.7482441717581,31.6689913831449,23.8396155236991,11.3981860478992,11.4486310025221,17.7657075539247,22.93741656146,15.0471631210609,1.6942555278512,5.9842280745933,6.30185064783336,5.15559547031063,6.16574267793578,7.55393897389701,5.40018000185445,2.70192721934532,3.62513927187364,8.80192529978094,59.6777248609016,53.4693330357382,40.1223973522215,29.9021261994002,39.1976614114327,21.1420034717516,19.1132185909389,18.3371200942616,22.1434254618353,19.7103825175762,26.8688057883654,19.4285131627658,18.353735464097,20.9362248363923,20.9065106998432,20.0043350338891,16.2238056322798,22.3774695737898,22.2526386433786,22.0798380201596,20.9150243955103,19.8772902898458,15.7367885365232,18.8950341622027,18.9159854634815,17.4306092256854,21.4025728261144,19.9932980692761,18.6051635968831,24.6902599529405,18.5070628273712,19.6023919927371,20.0523211153148,23.2405261778949,19.6764743200764,27.728974151112,21.9895711938684,14.8261027293326,10.9034349279241,25.5886046178638,18.5494268496337
|short_description=p1@Cdca4
}}

Revision as of 22:23, 12 September 2013

Short description:p1@Cdca4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdca4_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 0bp_to_ENSMUST00000062092, NM_028023, uc007pfi.1, uc007pfj.1_5end
EntrezGene:Cdca4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Cdca4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F238.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E637.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F136.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A158.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A368.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A589.54
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A621.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.43
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.39
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B910.07
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I347.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G650.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.91
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G834.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H135.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.88
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C323.67
Mouse Granule cells, donor2.CNhs12357.11731-123E327.51
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F247.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.04
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.22
Mouse Schwann, donor1.CNhs12507.11728-123D912.04
Mouse Schwann, donor2.CNhs12573.11746-123F910.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H916.05
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C530.36
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F512.06
adrenal gland, neonate N00.CNhs11191.1311-23C110.82
adrenal gland, neonate N25.CNhs11223.1377-27I312.19
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F519.74
bone (os femoris), neonate N16.CNhs11225.1525-43A634.45
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H716.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D130.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.30
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F123.75
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.01
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C645.54
eyeball, embryo E14.CNhs10521.399-16E244.60
eyeball, embryo E15.CNhs10593.426-16C938.53
eyeball, embryo E17.CNhs11023.1261-18D427.13
eyeball, neonate N00.CNhs11207.633-15C629.19
eyeball, neonate N01.CNhs11140.1532-43E729.34
eyeball, neonate N02.CNhs11205.1551-44G826.05
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E290.32
forelimb, embryo E12.CNhs10600.359-14H253.33
forelimb, embryo E13.CNhs10589.384-1E249.79
forelimb, embryo E14.CNhs10577.413-26A849.10
forelimb, embryo E15.CNhs11007.437-20E731.98
forelimb, embryo E17.CNhs10598.1517-43C424.03
forelimb, embryo E18.CNhs11008.1520-43B523.46
gonad, embryo E13.CNhs11044.1564-45I634.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C828.09
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D533.25
heart, embryo E11.CNhs10586.331-24E921.75
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I922.69
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C818.89
heart, embryo E16.CNhs11021.457-17C619.59
heart, embryo E17.CNhs11025.479-18E519.53
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E311.21
heart, neonate N03.CNhs11221.1349-25I217.11
heart, neonate N10.CNhs11118.749-24G111.98
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D28.86
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G115.64
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I544.58
intestine, embryo E13.CNhs11010.381-16D541.80
intestine, embryo E15.CNhs10602.976-16D832.86
intestine, embryo E16.CNhs10585.463-22H424.20
intestine, embryo E17.CNhs10582.482-18D321.13
intestine, embryo E18.CNhs10526.1289-20F719.59
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E914.99
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F215.52
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E317.29
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I964.87
kidney, embryo E15.CNhs10997.434-16F838.27
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I229.33
kidney, embryo E18.CNhs11001.1288-20C727.54
kidney, neonate N00.CNhs11214.646-21G721.18
kidney, neonate N10.CNhs11206.758-6D516.95
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F310.05
kidney, neonate N30.CNhs11203.1385-42H16.54
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F851.22
liver, embryo E13.CNhs10524.378-3H652.87
liver, embryo E14.CNhs10594.409-16E159.81
liver, embryo E15.CNhs10520.433-16D753.56
liver, embryo E16.CNhs10523.462-17F547.03
liver, embryo E17.CNhs10510.481-18A341.50
liver, embryo E18.CNhs10579.499-43G436.54
liver, neonate N00.CNhs11117.641-24F420.92
liver, neonate N03.CNhs11123.1345-25G222.51
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G253.06
lung, embryo E14.CNhs10604.404-26F846.45
lung, embryo E15.CNhs11020.432-17C538.02
lung, embryo E16.CNhs10998.458-17B632.62
lung, embryo E17.CNhs10605.480-44A624.79
lung, embryo E18.CNhs10583.1287-20I623.33
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E523.01
lung, neonate N07.CNhs11111.715-19A319.05
lung, neonate N10.CNhs11219.750-23E618.66
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C712.95
lung, neonate N30.CNhs11133.1394-42H213.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.02
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.70
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D821.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I713.63
ovary, embryo E18.CNhs11040.505-44H730.63
ovary, neonate N00.CNhs11217.1299-22I423.13
oviduct, adult pregnant day01.CNhs10500.988-6G613.53
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F436.42
pancreas, embryo E15.CNhs11042.1556-45F230.53
pancreas, embryo E16.CNhs11003.460-26E518.29
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I714.76
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E635.83
pituitary gland, embryo E13.CNhs11009.370-44C743.59
pituitary gland, embryo E14.CNhs11037.398-44A531.08
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F615.34
pituitary gland, embryo E17.CNhs11039.1265-44F515.80
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F811.25
skin, adult.CNhs10492.30-1C316.16
skin, neonate N00.CNhs11124.650-25G420.83
skin, neonate N03.CNhs11215.662-22H323.16
skin, neonate N06.CNhs11097.693-20I523.28
skin, neonate N10.CNhs11108.762-6C422.82
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G247.16
spleen, embryo E16.CNhs11035.461-43C138.39
spleen, embryo E18.CNhs11011.1271-21F237.41
spleen, neonate N10.CNhs11116.752-24D168.94
spleen, neonate N20.CNhs11112.824-19H162.33
spleen, neonate N25.CNhs11099.1354-25G359.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.25
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E360.58
stomach, embryo E15.CNhs10603.1252-16G839.85
stomach, embryo E16.CNhs11022.459-17D429.27
stomach, embryo E17.CNhs11006.1035-18D523.00
stomach, embryo E18.CNhs10999.1286-20C624.46
stomach, neonate N03.CNhs11193.1340-24B825.49
stomach, neonate N07.CNhs11210.718-18A916.20
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F528.56
testis, embryo E15.CNhs11034.443-27C535.08
testis, embryo E16.CNhs11033.470-26G531.70
testis, embryo E17.CNhs11029.486-18I529.45
testis, embryo E18.CNhs11027.503-18G527.03
testis, neonate N00.CNhs11189.1300-22B721.01
testis, neonate N07.CNhs11222.726-26I427.08
testis, neonate N10.CNhs11204.763-44D921.39
testis, neonate N20.CNhs11110.839-18H317.88
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B555.93
thymus, embryo E14.CNhs11041.402-44I451.49
thymus, embryo E15.CNhs11005.430-45I246.94
thymus, embryo E16.CNhs11002.456-26C544.69
thymus, embryo E17.CNhs10581.478-18C157.47
thymus, embryo E18.CNhs10595.1273-19G463.58
thymus, neonate N02.CNhs11181.1541-43F851.80
thymus, neonate N03.CNhs11137.2104-43C757.89
thymus, neonate N06.CNhs11197.681-26C450.69
thymus, neonate N07.CNhs11211.713-19D356.32
thymus, neonate N10.CNhs11194.748-24E459.08
thymus, neonate N20.CNhs11186.820-7A250.39
thymus, neonate N25.CNhs11125.1362-25G747.43
thymus, neonate N30.CNhs11132.1393-42G240.09
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.75
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.84
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E517.77
vagina, adult.CNhs10502.89-27D522.94
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I859.68
whole body, embryo E12.CNhs10587.857-27C953.47
whole body, embryo E13.CNhs10512.372-23H240.12
whole body, embryo E14.5.CNhs10578.420-27D229.90
whole body, embryo E14.CNhs10519.395-14B139.20
whole body, embryo E16.CNhs10514.453-14F221.14
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.88
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.24
whole body, embryo E17.5.CNhs10513.490-9F919.68
whole body, embryo E17.CNhs10517.475-3I527.73
whole body, embryo E18.CNhs10516.493-3B321.99
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D125.59
whole body, neonate N10.CNhs10518.761-6B418.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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