FFCP PHASE1:Mm9::chr12:28019641..28019644,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:28019641..28019644,-|id=chr12:28019641..28019644,-|ontology_enrichment_celltype=CL:0000117!6.38e-24!23;CL:0000337!6.38e-24!23;CL:0002609!3.27e-21!6;CL:0000540!3.67e-21!33;CL:0000047!3.67e-21!33;CL:0000031!3.67e-21!33;CL:0000404!3.67e-21!33;CL:0000221!1.39e-19!44;CL:0000133!1.39e-19!44;CL:0002319!8.26e-18!43;CL:0000393!1.96e-17!39;CL:0000211!1.96e-17!39;CL:0000055!7.38e-15!50;CL:0000120!1.70e-11!3;CL:0002608!2.52e-11!3;CL:0002321!5.02e-11!70;CL:0000220!5.02e-11!70;CL:0000197!5.91e-07!2;CL:0002491!5.91e-07!2;CL:0000098!5.91e-07!2|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002609,1.35e-22,6;CL:0000120,2.49e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.51e-12!73;UBERON:0005743!6.51e-12!73;UBERON:0000073!1.69e-11!75;UBERON:0001016!1.69e-11!75;UBERON:0004121!8.69e-11!102;UBERON:0000924!8.69e-11!102;UBERON:0006601!8.69e-11!102;UBERON:0002020!1.34e-10!34;UBERON:0002346!3.42e-09!71;UBERON:0003075!3.42e-09!71;UBERON:0007284!3.42e-09!71;UBERON:0001049!7.69e-09!52;UBERON:0005068!7.69e-09!52;UBERON:0006241!7.69e-09!52;UBERON:0007135!7.69e-09!52;UBERON:0002791!2.03e-08!29;UBERON:0003528!2.03e-08!29;UBERON:0001893!2.03e-08!29;UBERON:0001954!3.85e-08!7;UBERON:0003022!3.85e-08!7;UBERON:0002421!3.85e-08!7;UBERON:0000349!3.85e-08!7;UBERON:0002600!3.85e-08!7;UBERON:0000956!2.08e-07!21;UBERON:0001869!2.08e-07!21;UBERON:0000203!2.08e-07!21;UBERON:0002780!3.20e-07!39;UBERON:0001890!3.20e-07!39;UBERON:0006240!3.20e-07!39;UBERON:0003080!5.37e-07!40;UBERON:0003465!5.91e-07!2;UBERON:0008193!5.91e-07!2;UBERON:0000032!5.91e-07!2;UBERON:0005744!5.91e-07!2;UBERON:0008001!5.91e-07!2;UBERON:0007497!5.91e-07!2;UBERON:0009955!5.91e-07!2;UBERON:0003067!5.91e-07!2;UBERON:0002546!5.91e-07!2;UBERON:0007914!5.91e-07!2;UBERON:0003457!5.91e-07!2;UBERON:0004766!5.91e-07!2;UBERON:0005253!5.91e-07!2;UBERON:0002227!5.91e-07!2;UBERON:0001846!5.91e-07!2;UBERON:0003128!5.91e-07!2;UBERON:0002241!5.91e-07!2;UBERON:0002105!5.91e-07!2;UBERON:0001678!5.91e-07!2;UBERON:0003129!5.91e-07!2;UBERON:0001694!5.91e-07!2;UBERON:0004681!5.91e-07!2;UBERON:0001839!5.91e-07!2;UBERON:0001690!5.91e-07!2;UBERON:0001844!5.91e-07!2;UBERON:0001849!5.91e-07!2;UBERON:0002499!5.91e-07!2;UBERON:0005944!5.91e-07!2;UBERON:0001855!5.91e-07!2;UBERON:0001703!5.91e-07!2;UBERON:0003069!5.91e-07!2;UBERON:0003051!5.91e-07!2;UBERON:0004288!5.91e-07!2;UBERON:0004637!5.91e-07!2;UBERON:0004761!5.91e-07!2;UBERON:0010113!5.91e-07!2;UBERON:0003089!5.91e-07!2;UBERON:0009123!5.91e-07!2;UBERON:0009617!5.91e-07!2;UBERON:0005641!5.91e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.40e-08,29;UBERON:0002791,1.40e-08,29;UBERON:0001893,1.40e-08,29;UBERON:0001017,1.48e-07,73;UBERON:0002020,2.18e-07,34;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.44e-07,21;UBERON:0001869,5.44e-07,21;UBERON:0000203,5.44e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,1.14058573539325,4.59020190327748,0.630974884054146,0,0,0.61245399607477,0.479227355091182,5.51531271966013,0,0,0,0.395658863190582,1.18933936683133,0,0,0,0,0.883885756421003,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:28019641..28019644,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:28019641..28019644,- | |||
|id=chr12:28019641..28019644,- | |||
|ontology_enrichment_celltype=CL:0000117!6.38e-24!23;CL:0000337!6.38e-24!23;CL:0002609!3.27e-21!6;CL:0000540!3.67e-21!33;CL:0000047!3.67e-21!33;CL:0000031!3.67e-21!33;CL:0000404!3.67e-21!33;CL:0000221!1.39e-19!44;CL:0000133!1.39e-19!44;CL:0002319!8.26e-18!43;CL:0000393!1.96e-17!39;CL:0000211!1.96e-17!39;CL:0000055!7.38e-15!50;CL:0000120!1.70e-11!3;CL:0002608!2.52e-11!3;CL:0002321!5.02e-11!70;CL:0000220!5.02e-11!70;CL:0000197!5.91e-07!2;CL:0002491!5.91e-07!2;CL:0000098!5.91e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002609,1.35e-22,6;CL:0000120,2.49e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.51e-12!73;UBERON:0005743!6.51e-12!73;UBERON:0000073!1.69e-11!75;UBERON:0001016!1.69e-11!75;UBERON:0004121!8.69e-11!102;UBERON:0000924!8.69e-11!102;UBERON:0006601!8.69e-11!102;UBERON:0002020!1.34e-10!34;UBERON:0002346!3.42e-09!71;UBERON:0003075!3.42e-09!71;UBERON:0007284!3.42e-09!71;UBERON:0001049!7.69e-09!52;UBERON:0005068!7.69e-09!52;UBERON:0006241!7.69e-09!52;UBERON:0007135!7.69e-09!52;UBERON:0002791!2.03e-08!29;UBERON:0003528!2.03e-08!29;UBERON:0001893!2.03e-08!29;UBERON:0001954!3.85e-08!7;UBERON:0003022!3.85e-08!7;UBERON:0002421!3.85e-08!7;UBERON:0000349!3.85e-08!7;UBERON:0002600!3.85e-08!7;UBERON:0000956!2.08e-07!21;UBERON:0001869!2.08e-07!21;UBERON:0000203!2.08e-07!21;UBERON:0002780!3.20e-07!39;UBERON:0001890!3.20e-07!39;UBERON:0006240!3.20e-07!39;UBERON:0003080!5.37e-07!40;UBERON:0003465!5.91e-07!2;UBERON:0008193!5.91e-07!2;UBERON:0000032!5.91e-07!2;UBERON:0005744!5.91e-07!2;UBERON:0008001!5.91e-07!2;UBERON:0007497!5.91e-07!2;UBERON:0009955!5.91e-07!2;UBERON:0003067!5.91e-07!2;UBERON:0002546!5.91e-07!2;UBERON:0007914!5.91e-07!2;UBERON:0003457!5.91e-07!2;UBERON:0004766!5.91e-07!2;UBERON:0005253!5.91e-07!2;UBERON:0002227!5.91e-07!2;UBERON:0001846!5.91e-07!2;UBERON:0003128!5.91e-07!2;UBERON:0002241!5.91e-07!2;UBERON:0002105!5.91e-07!2;UBERON:0001678!5.91e-07!2;UBERON:0003129!5.91e-07!2;UBERON:0001694!5.91e-07!2;UBERON:0004681!5.91e-07!2;UBERON:0001839!5.91e-07!2;UBERON:0001690!5.91e-07!2;UBERON:0001844!5.91e-07!2;UBERON:0001849!5.91e-07!2;UBERON:0002499!5.91e-07!2;UBERON:0005944!5.91e-07!2;UBERON:0001855!5.91e-07!2;UBERON:0001703!5.91e-07!2;UBERON:0003069!5.91e-07!2;UBERON:0003051!5.91e-07!2;UBERON:0004288!5.91e-07!2;UBERON:0004637!5.91e-07!2;UBERON:0004761!5.91e-07!2;UBERON:0010113!5.91e-07!2;UBERON:0003089!5.91e-07!2;UBERON:0009123!5.91e-07!2;UBERON:0009617!5.91e-07!2;UBERON:0005641!5.91e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.40e-08,29;UBERON:0002791,1.40e-08,29;UBERON:0001893,1.40e-08,29;UBERON:0001017,1.48e-07,73;UBERON:0002020,2.18e-07,34;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.44e-07,21;UBERON:0001869,5.44e-07,21;UBERON:0000203,5.44e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,1.26766280701236,0,0,0,0,0,0,0,1.14058573539325,4.59020190327748,0.630974884054146,0,0,0.61245399607477,0.479227355091182,5.51531271966013,0,0,0,0.395658863190582,1.18933936683133,0,0,0,0,0.883885756421003,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:28019641..28019644,- | |||
}} |
Revision as of 22:38, 12 September 2013
Short description: | p@chr12:28019641..28019644, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28019641..28019644, - |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
neuron of cerebral cortex | 1.35e-22 | 6 |
granule cell | 2.49e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.40e-08 | 29 |
regional part of telencephalon | 1.40e-08 | 29 |
telencephalon | 1.40e-08 | 29 |
central nervous system | 1.48e-07 | 73 |
gray matter | 2.18e-07 | 34 |
nervous system | 2.31e-07 | 75 |
cerebral cortex | 5.44e-07 | 21 |
cerebral hemisphere | 5.44e-07 | 21 |
pallium | 5.44e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.