FFCP PHASE1:Hg19::chr3:170074447..170074452,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C656|description=CAGE_peak_at_chr3:170074447..170074452,+|id=chr3:170074447..170074452,+|ontology_enrichment_celltype=CL:0002057!2.42e-10!42;CL:0000557!1.12e-09!71;CL:0000738!2.82e-09!140;CL:0000860!3.59e-09!45;CL:0002009!1.08e-07!65;CL:0000766!1.62e-07!76;CL:0000988!2.36e-07!182;CL:0000839!2.76e-07!70;CL:0000451!4.24e-07!10;CL:0000037!7.47e-07!172;CL:0000566!7.47e-07!172|ontology_enrichment_celltype_v019=CL:0000784;1.20e-32;3!CL:0000451;2.44e-24;10!CL:0001014;1.20e-22;2!CL:0001016;1.20e-22;2!CL:0002393;8.81e-17;6!CL:0002397;8.81e-17;6!CL:0000840;9.30e-17;5!CL:0002032;1.25e-11;1!CL:0000557;1.25e-11;1!CL:0000990;2.30e-11;8!CL:0000453;1.25e-09;5|ontology_enrichment_celltype_v019_2=CL:0000784,1.02e-32,3;CL:0000451,2.38e-24,10;CL:0001014,1.34e-22,2;CL:0001016,1.34e-22,2;CL:0000840,9.55e-17,5;CL:0001029,9.55e-17,5;CL:0000557,3.58e-14,67;CL:0002393,2.26e-11,9;CL:0002397,2.26e-11,9;CL:0000990,2.34e-11,8;CL:0000738,4.16e-11,136;CL:0000037,3.72e-10,168;CL:0000763,3.92e-10,108;CL:0000049,3.92e-10,108;CL:0002009,4.75e-10,61;CL:0000453,1.31e-09,5;CL:0000988,1.56e-09,177;CL:0000766,2.56e-08,72;CL:0000839,4.67e-07,66|ontology_enrichment_development_v019=UBERON:0010115;1.25e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.74e-08!102;UBERON:0003061!2.74e-08!102;UBERON:0002371!2.98e-08!80;UBERON:0001474!4.80e-07!86|ontology_enrichment_uberon_v019=UBERON:0002363;1.25e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-12,76;UBERON:0002363,1.63e-11,1;UBERON:0007645,1.63e-11,1;UBERON:0007647,1.63e-11,1;UBERON:0010115,1.63e-11,1;UBERON:0001474,2.32e-11,82;UBERON:0002390,2.73e-11,98;UBERON:0003061,2.73e-11,98;UBERON:0004765,3.06e-10,90;UBERON:0002193,4.17e-10,108;UBERON:0002405,7.21e-10,93;UBERON:0001434,4.36e-09,100|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0.393364276848904,0,1.39334510984468,0,0,0,0,0,0.293600439334847,5.53995408531877,3.20871115952227,5.20826089718044,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,1.29096936716765,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0,0,0,0,1.26584954976354,0.422510572623884,0,0.209658645508376,0.44931452458598,0,0.48217676009124,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0.764546456250458,0,2.24203425192614,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,3.33886874027479,4.57595928624102,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,2.30591925467138,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,1.07857100409308,0.853820462427555,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.230850775511391,0.569710279235006,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,1.13735843331278,0.150323419414493,0,0,0,0,2.38944859545918,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0.126621591911757,0,0.160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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C656 | |||
|description=CAGE_peak_at_chr3:170074447..170074452,+ | |||
|id=chr3:170074447..170074452,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.42e-10!42;CL:0000557!1.12e-09!71;CL:0000738!2.82e-09!140;CL:0000860!3.59e-09!45;CL:0002009!1.08e-07!65;CL:0000766!1.62e-07!76;CL:0000988!2.36e-07!182;CL:0000839!2.76e-07!70;CL:0000451!4.24e-07!10;CL:0000037!7.47e-07!172;CL:0000566!7.47e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.20e-32;3!CL:0000451;2.44e-24;10!CL:0001014;1.20e-22;2!CL:0001016;1.20e-22;2!CL:0002393;8.81e-17;6!CL:0002397;8.81e-17;6!CL:0000840;9.30e-17;5!CL:0002032;1.25e-11;1!CL:0000557;1.25e-11;1!CL:0000990;2.30e-11;8!CL:0000453;1.25e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.02e-32,3;CL:0000451,2.38e-24,10;CL:0001014,1.34e-22,2;CL:0001016,1.34e-22,2;CL:0000840,9.55e-17,5;CL:0001029,9.55e-17,5;CL:0000557,3.58e-14,67;CL:0002393,2.26e-11,9;CL:0002397,2.26e-11,9;CL:0000990,2.34e-11,8;CL:0000738,4.16e-11,136;CL:0000037,3.72e-10,168;CL:0000763,3.92e-10,108;CL:0000049,3.92e-10,108;CL:0002009,4.75e-10,61;CL:0000453,1.31e-09,5;CL:0000988,1.56e-09,177;CL:0000766,2.56e-08,72;CL:0000839,4.67e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.25e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.74e-08!102;UBERON:0003061!2.74e-08!102;UBERON:0002371!2.98e-08!80;UBERON:0001474!4.80e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.25e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-12,76;UBERON:0002363,1.63e-11,1;UBERON:0007645,1.63e-11,1;UBERON:0007647,1.63e-11,1;UBERON:0010115,1.63e-11,1;UBERON:0001474,2.32e-11,82;UBERON:0002390,2.73e-11,98;UBERON:0003061,2.73e-11,98;UBERON:0004765,3.06e-10,90;UBERON:0002193,4.17e-10,108;UBERON:0002405,7.21e-10,93;UBERON:0001434,4.36e-09,100 | |||
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|short_description=p@chr3:170074447..170074452,+ | |||
}} |
Revision as of 22:40, 12 September 2013
Short description: | p@chr3:170074447..170074452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:170074447..170074452, + |
Coexpression cluster: | C656_CD14_immature_Dendritic_Basophils_CD34_CD133_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.02e-32 | 3 |
dendritic cell | 2.38e-24 | 10 |
CD1a-positive Langerhans cell | 1.34e-22 | 2 |
immature CD1a-positive Langerhans cell | 1.34e-22 | 2 |
immature conventional dendritic cell | 9.55e-17 | 5 |
common dendritic progenitor | 9.55e-17 | 5 |
granulocyte monocyte progenitor cell | 3.58e-14 | 67 |
intermediate monocyte | 2.26e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-11 | 9 |
conventional dendritic cell | 2.34e-11 | 8 |
leukocyte | 4.16e-11 | 136 |
hematopoietic stem cell | 3.72e-10 | 168 |
myeloid cell | 3.92e-10 | 108 |
common myeloid progenitor | 3.92e-10 | 108 |
macrophage dendritic cell progenitor | 4.75e-10 | 61 |
Langerhans cell | 1.31e-09 | 5 |
hematopoietic cell | 1.56e-09 | 177 |
myeloid leukocyte | 2.56e-08 | 72 |
myeloid lineage restricted progenitor cell | 4.67e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.35e-12 | 76 |
dura mater | 1.63e-11 | 1 |
future meninx | 1.63e-11 | 1 |
ectomeninx | 1.63e-11 | 1 |
future dura mater | 1.63e-11 | 1 |
bone element | 2.32e-11 | 82 |
hematopoietic system | 2.73e-11 | 98 |
blood island | 2.73e-11 | 98 |
skeletal element | 3.06e-10 | 90 |
hemolymphoid system | 4.17e-10 | 108 |
immune system | 7.21e-10 | 93 |
skeletal system | 4.36e-09 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.