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FFCP PHASE1:Mm9::chr12:45540033..45540056,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=319504|HGNC=|MCL_coexpression_id=57|UniProt=Q810U4|association_with_transcript=-14bp_to_uc007nlw.1_5end|description=CAGE_peak_4_at_Nrcam_5end|id=chr12:45540033..45540056,+|ontology_enrichment_celltype=CL:0000117!5.62e-10!23;CL:0000337!5.62e-10!23;CL:0000221!3.63e-07!44;CL:0000133!3.63e-07!44;CL:0000540!5.34e-07!33;CL:0000047!5.34e-07!33;CL:0000031!5.34e-07!33;CL:0000404!5.34e-07!33;CL:0002319!7.89e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,1.78e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.79e-27!63;UBERON:0004121!2.80e-27!102;UBERON:0000924!2.80e-27!102;UBERON:0006601!2.80e-27!102;UBERON:0001017!2.95e-23!73;UBERON:0005743!2.95e-23!73;UBERON:0002346!1.19e-22!71;UBERON:0003075!1.19e-22!71;UBERON:0007284!1.19e-22!71;UBERON:0000073!3.43e-22!75;UBERON:0001016!3.43e-22!75;UBERON:0003056!9.03e-22!49;UBERON:0001049!1.97e-19!52;UBERON:0005068!1.97e-19!52;UBERON:0006241!1.97e-19!52;UBERON:0007135!1.97e-19!52;UBERON:0000955!3.23e-18!50;UBERON:0006238!3.23e-18!50;UBERON:0002616!1.39e-17!49;UBERON:0007811!1.46e-16!86;UBERON:0000153!2.12e-15!94;UBERON:0002020!9.68e-14!34;UBERON:0003080!7.02e-13!40;UBERON:0002780!5.06e-12!39;UBERON:0001890!5.06e-12!39;UBERON:0006240!5.06e-12!39;UBERON:0000970!1.13e-11!9;UBERON:0000019!1.13e-11!9;UBERON:0000047!1.13e-11!9;UBERON:0004088!1.13e-11!9;UBERON:0002104!1.13e-11!9;UBERON:0001456!1.13e-11!9;UBERON:0003072!1.13e-11!9;UBERON:0003071!1.13e-11!9;UBERON:0004128!1.13e-11!9;UBERON:0000020!4.64e-11!12;UBERON:0001032!4.64e-11!12;UBERON:0004456!4.64e-11!12;UBERON:0002791!1.74e-10!29;UBERON:0003528!1.74e-10!29;UBERON:0001893!1.74e-10!29;UBERON:0005085!6.40e-10!13;UBERON:0001444!5.52e-09!11;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002619!9.46e-08!17;UBERON:0000956!1.08e-07!21;UBERON:0001869!1.08e-07!21;UBERON:0000203!1.08e-07!21;UBERON:0003076!1.32e-07!12;UBERON:0003057!1.32e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.22e-27,9;UBERON:0000019,3.22e-27,9;UBERON:0000047,3.22e-27,9;UBERON:0010312,3.22e-27,9;UBERON:0004088,3.22e-27,9;UBERON:0002104,3.22e-27,9;UBERON:0001456,3.22e-27,9;UBERON:0003072,3.22e-27,9;UBERON:0004128,3.22e-27,9;UBERON:0003071,3.22e-27,9;UBERON:0002346,1.18e-23,64;UBERON:0003075,1.18e-23,64;UBERON:0007284,1.18e-23,64;UBERON:0001444,5.90e-22,11;UBERON:0004121,2.75e-20,95;UBERON:0000924,2.75e-20,95;UBERON:0006601,2.75e-20,95;UBERON:0010371,4.31e-20,73;UBERON:0000020,5.56e-20,12;UBERON:0001032,5.56e-20,12;UBERON:0004456,5.56e-20,12;UBERON:0003056,8.27e-20,49;UBERON:0000033,2.61e-18,13;UBERON:0005085,2.61e-18,13;UBERON:0010314,7.42e-15,92;UBERON:0000073,1.05e-12,54;UBERON:0001017,6.02e-11,73;UBERON:0001016,1.53e-10,75;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0002616,5.44e-09,46;UBERON:0000955,9.71e-09,47;UBERON:0006238,9.71e-09,47;UBERON:0004684,1.78e-08,3;UBERON:0002275,1.78e-08,3;UBERON:0002021,9.54e-07,10;UBERON:0000411,9.54e-07,10;UBERON:0001950,9.54e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,1.40456071893706,1.0752457327937,0.263772575460388,0.640413505216868,0,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,3.56059401582874,0,0,0,0.127070227073065,2.39665023047716,0.457500602818626,0,1.39059456153821,1.02286182932132,1.87009240103604,1.46017136760982,0,0,0,3.57751155007006,3.25301107406759,3.44853156650209,7.38254732201932,2.71268672104287,4.83059143974428,5.63700369253339,4.2165776051878,11.9003550539947,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,1.89038500578056,0.685082519770642,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.31136204275253,0.399024873401031,1.19513524027894,0,0,0,0,0.412070114477788,0,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p4@Nrcam}}
|EntrezGene=319504
|HGNC=
|MCL_coexpression_id=57
|UniProt=Q810U4
|association_with_transcript=-14bp_to_uc007nlw.1_5end
|description=CAGE_peak_4_at_Nrcam_5end
|id=chr12:45540033..45540056,+
|ontology_enrichment_celltype=CL:0000117!5.62e-10!23;CL:0000337!5.62e-10!23;CL:0000221!3.63e-07!44;CL:0000133!3.63e-07!44;CL:0000540!5.34e-07!33;CL:0000047!5.34e-07!33;CL:0000031!5.34e-07!33;CL:0000404!5.34e-07!33;CL:0002319!7.89e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002610,1.78e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.79e-27!63;UBERON:0004121!2.80e-27!102;UBERON:0000924!2.80e-27!102;UBERON:0006601!2.80e-27!102;UBERON:0001017!2.95e-23!73;UBERON:0005743!2.95e-23!73;UBERON:0002346!1.19e-22!71;UBERON:0003075!1.19e-22!71;UBERON:0007284!1.19e-22!71;UBERON:0000073!3.43e-22!75;UBERON:0001016!3.43e-22!75;UBERON:0003056!9.03e-22!49;UBERON:0001049!1.97e-19!52;UBERON:0005068!1.97e-19!52;UBERON:0006241!1.97e-19!52;UBERON:0007135!1.97e-19!52;UBERON:0000955!3.23e-18!50;UBERON:0006238!3.23e-18!50;UBERON:0002616!1.39e-17!49;UBERON:0007811!1.46e-16!86;UBERON:0000153!2.12e-15!94;UBERON:0002020!9.68e-14!34;UBERON:0003080!7.02e-13!40;UBERON:0002780!5.06e-12!39;UBERON:0001890!5.06e-12!39;UBERON:0006240!5.06e-12!39;UBERON:0000970!1.13e-11!9;UBERON:0000019!1.13e-11!9;UBERON:0000047!1.13e-11!9;UBERON:0004088!1.13e-11!9;UBERON:0002104!1.13e-11!9;UBERON:0001456!1.13e-11!9;UBERON:0003072!1.13e-11!9;UBERON:0003071!1.13e-11!9;UBERON:0004128!1.13e-11!9;UBERON:0000020!4.64e-11!12;UBERON:0001032!4.64e-11!12;UBERON:0004456!4.64e-11!12;UBERON:0002791!1.74e-10!29;UBERON:0003528!1.74e-10!29;UBERON:0001893!1.74e-10!29;UBERON:0005085!6.40e-10!13;UBERON:0001444!5.52e-09!11;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002619!9.46e-08!17;UBERON:0000956!1.08e-07!21;UBERON:0001869!1.08e-07!21;UBERON:0000203!1.08e-07!21;UBERON:0003076!1.32e-07!12;UBERON:0003057!1.32e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.22e-27,9;UBERON:0000019,3.22e-27,9;UBERON:0000047,3.22e-27,9;UBERON:0010312,3.22e-27,9;UBERON:0004088,3.22e-27,9;UBERON:0002104,3.22e-27,9;UBERON:0001456,3.22e-27,9;UBERON:0003072,3.22e-27,9;UBERON:0004128,3.22e-27,9;UBERON:0003071,3.22e-27,9;UBERON:0002346,1.18e-23,64;UBERON:0003075,1.18e-23,64;UBERON:0007284,1.18e-23,64;UBERON:0001444,5.90e-22,11;UBERON:0004121,2.75e-20,95;UBERON:0000924,2.75e-20,95;UBERON:0006601,2.75e-20,95;UBERON:0010371,4.31e-20,73;UBERON:0000020,5.56e-20,12;UBERON:0001032,5.56e-20,12;UBERON:0004456,5.56e-20,12;UBERON:0003056,8.27e-20,49;UBERON:0000033,2.61e-18,13;UBERON:0005085,2.61e-18,13;UBERON:0010314,7.42e-15,92;UBERON:0000073,1.05e-12,54;UBERON:0001017,6.02e-11,73;UBERON:0001016,1.53e-10,75;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0002616,5.44e-09,46;UBERON:0000955,9.71e-09,47;UBERON:0006238,9.71e-09,47;UBERON:0004684,1.78e-08,3;UBERON:0002275,1.78e-08,3;UBERON:0002021,9.54e-07,10;UBERON:0000411,9.54e-07,10;UBERON:0001950,9.54e-07,10
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,1.40456071893706,1.0752457327937,0.263772575460388,0.640413505216868,0,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,3.56059401582874,0,0,0,0.127070227073065,2.39665023047716,0.457500602818626,0,1.39059456153821,1.02286182932132,1.87009240103604,1.46017136760982,0,0,0,3.57751155007006,3.25301107406759,3.44853156650209,7.38254732201932,2.71268672104287,4.83059143974428,5.63700369253339,4.2165776051878,11.9003550539947,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,2.25900737046827,1.84130094602871,0.572895513439397,1.89038500578056,0.685082519770642,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.31136204275253,0.399024873401031,1.19513524027894,0,0,0,0,0.412070114477788,0,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0
|short_description=p4@Nrcam
}}

Revision as of 22:50, 12 September 2013

Short description:p4@Nrcam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nrcam_5end
Coexpression cluster:MCL_coexpression_mm9:57
Association with transcript: -14bp_to_uc007nlw.1_5end
EntrezGene:Nrcam
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Nrcam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.78e-083

Uber anatomy
Ontology termp-valuen
eye3.22e-279
camera-type eye3.22e-279
simple eye3.22e-279
immature eye3.22e-279
ocular region3.22e-279
visual system3.22e-279
face3.22e-279
optic cup3.22e-279
optic vesicle3.22e-279
eye primordium3.22e-279
neurectoderm1.18e-2364
neural plate1.18e-2364
presumptive neural plate1.18e-2364
subdivision of head5.90e-2211
ectoderm-derived structure2.75e-2095
ectoderm2.75e-2095
presumptive ectoderm2.75e-2095
ecto-epithelium4.31e-2073
sense organ5.56e-2012
sensory system5.56e-2012
entire sense organ system5.56e-2012
pre-chordal neural plate8.27e-2049
head2.61e-1813
ectodermal placode2.61e-1813
structure with developmental contribution from neural crest7.42e-1592
regional part of nervous system1.05e-1254
central nervous system6.02e-1173
nervous system1.53e-1075
neural tube2.28e-1052
neural rod2.28e-1052
future spinal cord2.28e-1052
neural keel2.28e-1052
regional part of brain5.44e-0946
brain9.71e-0947
future brain9.71e-0947
raphe nuclei1.78e-083
reticular formation1.78e-083
occipital lobe9.54e-0710
visual cortex9.54e-0710
neocortex9.54e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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