FFCP PHASE1:Mm9::chr12:4776181..4776192,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=382562|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=36bp_to_uc007myh.1_5end|description=CAGE_peak_5_at_Pfn4_5end|id=chr12:4776181..4776192,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.15e-08!52;UBERON:0005068!6.15e-08!52;UBERON:0006241!6.15e-08!52;UBERON:0007135!6.15e-08!52;UBERON:0000955!8.73e-08!50;UBERON:0006238!8.73e-08!50;UBERON:0002346!1.10e-07!71;UBERON:0003075!1.10e-07!71;UBERON:0007284!1.10e-07!71;UBERON:0002616!3.74e-07!49;UBERON:0000073!3.76e-07!75;UBERON:0001016!3.76e-07!75;UBERON:0001017!4.44e-07!73;UBERON:0005743!4.44e-07!73;UBERON:0000033!5.93e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002259,8.99e-11,1;UBERON:0002314,8.99e-11,1;UBERON:0004061,8.99e-11,1;UBERON:0006777,8.99e-11,1;UBERON:0005882,8.99e-11,1;UBERON:0002950,1.58e-10,4;UBERON:0001891,1.58e-10,4;UBERON:0009616,1.58e-10,4;UBERON:0010286,1.58e-10,4;UBERON:0000473,4.38e-07,14|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0.61119299110724,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.767146371990992,0.62336413367868,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.7865139107878,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.314578033277133,17.3940566994724,20.1621004380506,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p5@Pfn4}} | ||
|EntrezGene=382562 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=36bp_to_uc007myh.1_5end | |||
|description=CAGE_peak_5_at_Pfn4_5end | |||
|id=chr12:4776181..4776192,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.15e-08!52;UBERON:0005068!6.15e-08!52;UBERON:0006241!6.15e-08!52;UBERON:0007135!6.15e-08!52;UBERON:0000955!8.73e-08!50;UBERON:0006238!8.73e-08!50;UBERON:0002346!1.10e-07!71;UBERON:0003075!1.10e-07!71;UBERON:0007284!1.10e-07!71;UBERON:0002616!3.74e-07!49;UBERON:0000073!3.76e-07!75;UBERON:0001016!3.76e-07!75;UBERON:0001017!4.44e-07!73;UBERON:0005743!4.44e-07!73;UBERON:0000033!5.93e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,8.99e-11,1;UBERON:0002314,8.99e-11,1;UBERON:0004061,8.99e-11,1;UBERON:0006777,8.99e-11,1;UBERON:0005882,8.99e-11,1;UBERON:0002950,1.58e-10,4;UBERON:0001891,1.58e-10,4;UBERON:0009616,1.58e-10,4;UBERON:0010286,1.58e-10,4;UBERON:0000473,4.38e-07,14 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0.61119299110724,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.767146371990992,0.62336413367868,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.7865139107878,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.314578033277133,17.3940566994724,20.1621004380506,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Pfn4 | |||
}} |
Revision as of 22:51, 12 September 2013
Short description: | p5@Pfn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pfn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 36bp_to_uc007myh.1_5end |
EntrezGene: | Pfn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 8.99e-11 | 1 |
midbrain tectum | 8.99e-11 | 1 |
neural tube mantle layer | 8.99e-11 | 1 |
tectal plate | 8.99e-11 | 1 |
neural tube alar plate | 8.99e-11 | 1 |
regional part of midbrain | 1.58e-10 | 4 |
midbrain | 1.58e-10 | 4 |
presumptive midbrain | 1.58e-10 | 4 |
midbrain neural tube | 1.58e-10 | 4 |
testis | 4.38e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.