FFCP PHASE1:Mm9::chr12:73313399..73313409,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=525|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73313399..73313409,-|id=chr12:73313399..73313409,-|ontology_enrichment_celltype=CL:0000117!7.50e-22!23;CL:0000337!7.50e-22!23;CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0002319!3.37e-13!43;CL:0000393!8.85e-13!39;CL:0000211!8.85e-13!39;CL:0000221!9.90e-13!44;CL:0000133!9.90e-13!44;CL:0000055!1.81e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-19,23;CL:0000337,1.24e-19,23;CL:0000540,2.15e-13,33;CL:0000047,2.15e-13,33;CL:0000031,2.15e-13,33;CL:0000404,2.15e-13,33;CL:0000393,3.53e-11,39;CL:0000211,3.53e-11,39;CL:0002319,4.82e-10,43;CL:0000221,8.61e-10,44;CL:0000133,8.61e-10,44;CL:0002612,7.10e-09,3;CL:0000120,9.29e-09,3;CL:0002614,1.11e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.30e-34!73;UBERON:0005743!6.30e-34!73;UBERON:0001049!1.21e-32!52;UBERON:0005068!1.21e-32!52;UBERON:0006241!1.21e-32!52;UBERON:0007135!1.21e-32!52;UBERON:0000073!1.25e-32!75;UBERON:0001016!1.25e-32!75;UBERON:0002020!1.89e-30!34;UBERON:0002346!2.87e-28!71;UBERON:0003075!2.87e-28!71;UBERON:0007284!2.87e-28!71;UBERON:0000955!7.00e-28!50;UBERON:0006238!7.00e-28!50;UBERON:0002616!6.38e-27!49;UBERON:0004121!9.56e-27!102;UBERON:0000924!9.56e-27!102;UBERON:0006601!9.56e-27!102;UBERON:0002791!8.16e-24!29;UBERON:0003528!8.16e-24!29;UBERON:0001893!8.16e-24!29;UBERON:0000033!1.21e-23!63;UBERON:0003080!3.47e-21!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!1.77e-19!49;UBERON:0000956!1.94e-16!21;UBERON:0001869!1.94e-16!21;UBERON:0000203!1.94e-16!21;UBERON:0007811!3.53e-14!86;UBERON:0003076!4.14e-12!12;UBERON:0003057!4.14e-12!12;UBERON:0002619!4.45e-12!17;UBERON:0000153!5.15e-12!94;UBERON:0002021!1.94e-11!10;UBERON:0000411!1.94e-11!10;UBERON:0001950!1.94e-11!10;UBERON:0000025!6.31e-10!114;UBERON:0004111!3.62e-09!122;UBERON:0002240!7.76e-09!6;UBERON:0005174!7.76e-09!6;UBERON:0001137!7.76e-09!6;UBERON:0002420!1.62e-08!8;UBERON:0007245!1.62e-08!8;UBERON:0010009!1.62e-08!8;UBERON:0010011!1.62e-08!8;UBERON:0000454!1.62e-08!8;UBERON:0001948!5.83e-08!5;UBERON:0002315!5.83e-08!5;UBERON:0000369!2.61e-07!5;UBERON:0002435!2.61e-07!5;UBERON:0000204!2.61e-07!5;UBERON:0010082!2.61e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.31e-24,34;UBERON:0002021,2.73e-21,10;UBERON:0000411,2.73e-21,10;UBERON:0001950,2.73e-21,10;UBERON:0000073,4.87e-17,54;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003528,1.16e-15,29;UBERON:0002791,1.16e-15,29;UBERON:0001893,1.16e-15,29;UBERON:0001049,4.39e-15,52;UBERON:0005068,4.39e-15,52;UBERON:0006241,4.39e-15,52;UBERON:0007135,4.39e-15,52;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002619,2.11e-12,17;UBERON:0002346,5.58e-12,64;UBERON:0003075,5.58e-12,64;UBERON:0007284,5.58e-12,64;UBERON:0002780,2.18e-11,39;UBERON:0001890,2.18e-11,39;UBERON:0006240,2.18e-11,39;UBERON:0001948,2.51e-11,5;UBERON:0002315,2.51e-11,5;UBERON:0003080,4.45e-11,40;UBERON:0010371,2.57e-10,73;UBERON:0000956,5.67e-10,21;UBERON:0001869,5.67e-10,21;UBERON:0000203,5.67e-10,21;UBERON:0002240,1.58e-09,6;UBERON:0005174,1.58e-09,6;UBERON:0001137,1.58e-09,6;UBERON:0002616,1.70e-09,46;UBERON:0000955,2.85e-09,47;UBERON:0006238,2.85e-09,47;UBERON:0002257,7.10e-09,3;UBERON:0003056,7.54e-09,49;UBERON:0002038,1.11e-08,3;UBERON:0009663,1.11e-08,3;UBERON:0009661,1.11e-08,3;UBERON:0000125,1.11e-08,3;UBERON:0002308,1.11e-08,3;UBERON:0010314,7.33e-08,92;UBERON:0002420,3.48e-07,8;UBERON:0007245,3.48e-07,8;UBERON:0010009,3.48e-07,8;UBERON:0010011,3.48e-07,8;UBERON:0000454,3.48e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.573066879877513,0,0.404632921719196,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.810035629990144,0.420649922702764,1.99955689082663,0.662605622854841,0.489963196859816,0.766763768145891,0,0,1.0214987046815,0.921639199537461,0.923204014111357,2.10421580285542,0.52091337055676,1.67509799400829,0,1.5279824777681,1.17851434189467,2.70506193518296,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.869121600961382,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,2.30162618253588,2.29158205375759,1.71853182343688,1.37016503954128,0,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr12:73313399..73313409,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=525 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:73313399..73313409,- | |||
|id=chr12:73313399..73313409,- | |||
|ontology_enrichment_celltype=CL:0000117!7.50e-22!23;CL:0000337!7.50e-22!23;CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0002319!3.37e-13!43;CL:0000393!8.85e-13!39;CL:0000211!8.85e-13!39;CL:0000221!9.90e-13!44;CL:0000133!9.90e-13!44;CL:0000055!1.81e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-19,23;CL:0000337,1.24e-19,23;CL:0000540,2.15e-13,33;CL:0000047,2.15e-13,33;CL:0000031,2.15e-13,33;CL:0000404,2.15e-13,33;CL:0000393,3.53e-11,39;CL:0000211,3.53e-11,39;CL:0002319,4.82e-10,43;CL:0000221,8.61e-10,44;CL:0000133,8.61e-10,44;CL:0002612,7.10e-09,3;CL:0000120,9.29e-09,3;CL:0002614,1.11e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.30e-34!73;UBERON:0005743!6.30e-34!73;UBERON:0001049!1.21e-32!52;UBERON:0005068!1.21e-32!52;UBERON:0006241!1.21e-32!52;UBERON:0007135!1.21e-32!52;UBERON:0000073!1.25e-32!75;UBERON:0001016!1.25e-32!75;UBERON:0002020!1.89e-30!34;UBERON:0002346!2.87e-28!71;UBERON:0003075!2.87e-28!71;UBERON:0007284!2.87e-28!71;UBERON:0000955!7.00e-28!50;UBERON:0006238!7.00e-28!50;UBERON:0002616!6.38e-27!49;UBERON:0004121!9.56e-27!102;UBERON:0000924!9.56e-27!102;UBERON:0006601!9.56e-27!102;UBERON:0002791!8.16e-24!29;UBERON:0003528!8.16e-24!29;UBERON:0001893!8.16e-24!29;UBERON:0000033!1.21e-23!63;UBERON:0003080!3.47e-21!40;UBERON:0002780!3.30e-20!39;UBERON:0001890!3.30e-20!39;UBERON:0006240!3.30e-20!39;UBERON:0003056!1.77e-19!49;UBERON:0000956!1.94e-16!21;UBERON:0001869!1.94e-16!21;UBERON:0000203!1.94e-16!21;UBERON:0007811!3.53e-14!86;UBERON:0003076!4.14e-12!12;UBERON:0003057!4.14e-12!12;UBERON:0002619!4.45e-12!17;UBERON:0000153!5.15e-12!94;UBERON:0002021!1.94e-11!10;UBERON:0000411!1.94e-11!10;UBERON:0001950!1.94e-11!10;UBERON:0000025!6.31e-10!114;UBERON:0004111!3.62e-09!122;UBERON:0002240!7.76e-09!6;UBERON:0005174!7.76e-09!6;UBERON:0001137!7.76e-09!6;UBERON:0002420!1.62e-08!8;UBERON:0007245!1.62e-08!8;UBERON:0010009!1.62e-08!8;UBERON:0010011!1.62e-08!8;UBERON:0000454!1.62e-08!8;UBERON:0001948!5.83e-08!5;UBERON:0002315!5.83e-08!5;UBERON:0000369!2.61e-07!5;UBERON:0002435!2.61e-07!5;UBERON:0000204!2.61e-07!5;UBERON:0010082!2.61e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.31e-24,34;UBERON:0002021,2.73e-21,10;UBERON:0000411,2.73e-21,10;UBERON:0001950,2.73e-21,10;UBERON:0000073,4.87e-17,54;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003528,1.16e-15,29;UBERON:0002791,1.16e-15,29;UBERON:0001893,1.16e-15,29;UBERON:0001049,4.39e-15,52;UBERON:0005068,4.39e-15,52;UBERON:0006241,4.39e-15,52;UBERON:0007135,4.39e-15,52;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002619,2.11e-12,17;UBERON:0002346,5.58e-12,64;UBERON:0003075,5.58e-12,64;UBERON:0007284,5.58e-12,64;UBERON:0002780,2.18e-11,39;UBERON:0001890,2.18e-11,39;UBERON:0006240,2.18e-11,39;UBERON:0001948,2.51e-11,5;UBERON:0002315,2.51e-11,5;UBERON:0003080,4.45e-11,40;UBERON:0010371,2.57e-10,73;UBERON:0000956,5.67e-10,21;UBERON:0001869,5.67e-10,21;UBERON:0000203,5.67e-10,21;UBERON:0002240,1.58e-09,6;UBERON:0005174,1.58e-09,6;UBERON:0001137,1.58e-09,6;UBERON:0002616,1.70e-09,46;UBERON:0000955,2.85e-09,47;UBERON:0006238,2.85e-09,47;UBERON:0002257,7.10e-09,3;UBERON:0003056,7.54e-09,49;UBERON:0002038,1.11e-08,3;UBERON:0009663,1.11e-08,3;UBERON:0009661,1.11e-08,3;UBERON:0000125,1.11e-08,3;UBERON:0002308,1.11e-08,3;UBERON:0010314,7.33e-08,92;UBERON:0002420,3.48e-07,8;UBERON:0007245,3.48e-07,8;UBERON:0010009,3.48e-07,8;UBERON:0010011,3.48e-07,8;UBERON:0000454,3.48e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.573066879877513,0,0.404632921719196,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.810035629990144,0.420649922702764,1.99955689082663,0.662605622854841,0.489963196859816,0.766763768145891,0,0,1.0214987046815,0.921639199537461,0.923204014111357,2.10421580285542,0.52091337055676,1.67509799400829,0,1.5279824777681,1.17851434189467,2.70506193518296,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.869121600961382,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,2.30162618253588,2.29158205375759,1.71853182343688,1.37016503954128,0,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:73313399..73313409,- | |||
}} |
Revision as of 23:07, 12 September 2013
Short description: | p@chr12:73313399..73313409, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73313399..73313409, - |
Coexpression cluster: | MCL_coexpression_mm9:525 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-19 | 23 |
neuron | 2.15e-13 | 33 |
neuronal stem cell | 2.15e-13 | 33 |
neuroblast | 2.15e-13 | 33 |
electrically signaling cell | 2.15e-13 | 33 |
electrically responsive cell | 3.53e-11 | 39 |
electrically active cell | 3.53e-11 | 39 |
neural cell | 4.82e-10 | 43 |
ectodermal cell | 8.61e-10 | 44 |
neurectodermal cell | 8.61e-10 | 44 |
neuron of the ventral spinal cord | 7.10e-09 | 3 |
granule cell | 9.29e-09 | 3 |
neuron of the substantia nigra | 1.11e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.